Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770262.1:47467877-47475161[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.5 1.1e+03 1.8 0.1 3 13 66 76 64 81 0.80

2 16 0.026 2.9 9.9 1.3 2 20 213 231 212 233 0.92

3 16 3.8 4.3e+02 3.1 1.8 3 23 241 262 240 262 0.93

4 16 0.00081 0.091 14.7 2.6 3 23 270 290 268 290 0.95

5 16 0.0014 0.16 13.9 0.6 1 23 296 319 296 319 0.95

6 16 0.00085 0.096 14.6 3.3 1 23 324 346 324 346 0.97

7 16 0.016 1.8 10.6 10.8 1 23 352 374 352 374 0.98

8 16 3e-05 0.0034 19.1 2.9 1 23 380 402 380 402 0.96

9 16 3.7e-05 0.0041 18.9 4.1 1 23 408 430 408 430 0.98

10 16 2.1e-08 2.4e-06 29.1 0.7 1 23 436 458 436 458 0.99

11 16 0.00073 0.082 14.8 3.9 1 23 464 487 464 487 0.95

12 16 0.00046 0.052 15.4 1.6 1 21 525 545 525 547 0.94

13 16 8.7e-05 0.0097 17.7 0.4 1 23 553 576 553 576 0.95

14 16 2.1e-05 0.0024 19.6 0.6 1 23 582 604 582 604 0.98

15 16 6.7e-06 0.00076 21.2 1.9 1 23 610 632 610 632 0.99

16 16 0.014 1.5 10.8 0.2 1 23 638 660 638 660 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.5	1.1e+03	1.8	0.1	3	13	66	76	64	81	0.80
2	16	0.026	2.9	9.9	1.3	2	20	213	231	212	233	0.92
3	16	3.8	4.3e+02	3.1	1.8	3	23	241	262	240	262	0.93
4	16	0.00081	0.091	14.7	2.6	3	23	270	290	268	290	0.95
5	16	0.0014	0.16	13.9	0.6	1	23	296	319	296	319	0.95
6	16	0.00085	0.096	14.6	3.3	1	23	324	346	324	346	0.97
7	16	0.016	1.8	10.6	10.8	1	23	352	374	352	374	0.98
8	16	3e-05	0.0034	19.1	2.9	1	23	380	402	380	402	0.96
9	16	3.7e-05	0.0041	18.9	4.1	1	23	408	430	408	430	0.98
10	16	2.1e-08	2.4e-06	29.1	0.7	1	23	436	458	436	458	0.99
11	16	0.00073	0.082	14.8	3.9	1	23	464	487	464	487	0.95
12	16	0.00046	0.052	15.4	1.6	1	21	525	545	525	547	0.94
13	16	8.7e-05	0.0097	17.7	0.4	1	23	553	576	553	576	0.95
14	16	2.1e-05	0.0024	19.6	0.6	1	23	582	604	582	604	0.98
15	16	6.7e-06	0.00076	21.2	1.9	1	23	610	632	610	632	0.99
16	16	0.014	1.5	10.8	0.2	1	23	638	660	638	660	0.98

Sequence Information

Coding Sequence: atgaaagtTGAACGCTTAGCGGAATTAGAAAACACATGCCGGACGTGCTTCAATAGTGCTGTTGAGGAAAAAAGTTTAGCGCTTCTTTTCGCGAGTCCAGCAGCGTCCGCAGAAATCgtgcaaaaagaaattttggatgaaaTTTTTGCTTTTCGACTGAATATATCGAAGAACGATGGACTGCCGCAACAGATCTGTCCCAAGTGTCTCGAAGCATTCTCGTCTATCATGAAATTCCGGAAGCGATGCCTTGAAGTCCAAGAAGAGCTGATGGCTTCGTTTTCGCAAGACTCTGCCGATATTAAACAAGAGGAATCTAATACCTATATAGAATTTGAATTTATGGTAGTCGAACAAGAAGAAAATGCTGTTGGAGAGAATCTGCAAACTACCACATCTTCGTCGGAAAGCTTCATTGAGAAAATCCCACTGGCTAGTACAAACGATTCGAATAACGAAGGAAATGAAGAAGATGATTATATTTATGATATGTACGTTGATAGTCTGACCGAGAACGTCCATGAAGAGTCCGTCGATTCGAGCAAAACTCAAGTTGATGTAACTGAACGAATCGCCAATTGTCTTGAAGATagtCAAAATCATAAATTGTCAGATCCAGACAACATAAGCGAATCGACATGTACATCTTGCTCTAAGCACTTTTCAACCGTTGAGAAACTAAATAATCACAAACTAATATGTTCTCGTGCTCCGCCGCATTGTCGTTATTGTAAAATCGATTTCGAAACAACAGAAATTCTAAAATCTCACCTGAATGAATTTCATCCAAAAGATCGTCCGCATCTATGTCCAATTTGCAAACGGACGTTCAACAGCGTTTCGAATCGGAATACGCATTTACAATCGCACAACAAAAACGATATGTTTCGATGCGATGTTTGCAATCAAGGTTTCAAGAGTAAAGTGTATGTGGCAAAGCATAAAAAAGCTGTACACGAGACCGGACATCATGTGTGCGAATTGTGTGATCAAACTTTCAACAATacgataaaatataaatatcatatgCGTTCGCATAATCCGATTAAGAAGCACAAGTGCAAATACTGCGAAAAGACTTTCATGCAACATCATCATGTGATAAATCACGAACGAACGCATACCGGATTGCGACCGTTTCTATGTAATATATGCGGAAAGGATTTCAAACAGGAGTGCAATTTTAAACTACATTTACGAGTGCATAGCGGCGAACGACCTTATATTTGCAGTATATGTGGTAAAAaTTTCAGTCAGCATGGTACATTTCTCATGCATATGCGCCATCATAACGGCGTTCGTCCATTTCAATGCGAAATTTGcggaaaaaatttcattcagaaaTCAACTCTAAACGTTCATTTGCGTACTCACACTGGCGAAAAACCTTACAAATGCGATTTATGCGAGAAAGCCTTTAAGCAAACGCATCAACTAAAATATCATAAATACTCAGCACATAATGGACCACCGGtagcaatgaaaaaaaagcCATCGAAGCTTGATTCGTCGATGGATGATGATAATGCTGCGAACAAATCGCCTACAGAAATTTCAACATCCGGCTACACTTACTCTTGCCCGATATGTTCAAGAGGCTTTAAGCTTCCCTCGTCGTTGACGACGCACGTTAAATGCCATTCGGAAGAACGGAAATTCATATGCAAAGAATGCGGTAATCTCTTTAAACGTGCCGAACATTTACGAATTCATATCAATGGTGTTCATTTAAAACGAAAACCGTATGCATGCGATTATTGCAGTAAGACATTTGCTCAGTCTGGCGACCGGAATATTCATATGAAAAGTCATACGCacGAAAAACCGTATCAGTGTAAGTATTGTCAAAAAGGATTCAAACTTCAAAAATCTTTACGTGCTCACGAACGAATTCATACGGGCGAGAAGCCCTTTACATGCGAGATTTGTACATCGGATTTCATTTCGTATAATGCATTGGCCATTCACACAATGAAACATACCGACgaagagaaggaaatgattaaAGATAAAACAATATTGGAAGTACAAAACTCATTTAAGAATGAAACGCAGCCGTCAGAAACGACAATAATgacaattttattataa
Protein Sequence: MKVERLAELENTCRTCFNSAVEEKSLALLFASPAASAEIVQKEILDEIFAFRLNISKNDGLPQQICPKCLEAFSSIMKFRKRCLEVQEELMASFSQDSADIKQEESNTYIEFEFMVVEQEENAVGENLQTTTSSSESFIEKIPLASTNDSNNEGNEEDDYIYDMYVDSLTENVHEESVDSSKTQVDVTERIANCLEDSQNHKLSDPDNISESTCTSCSKHFSTVEKLNNHKLICSRAPPHCRYCKIDFETTEILKSHLNEFHPKDRPHLCPICKRTFNSVSNRNTHLQSHNKNDMFRCDVCNQGFKSKVYVAKHKKAVHETGHHVCELCDQTFNNTIKYKYHMRSHNPIKKHKCKYCEKTFMQHHHVINHERTHTGLRPFLCNICGKDFKQECNFKLHLRVHSGERPYICSICGKNFSQHGTFLMHMRHHNGVRPFQCEICGKNFIQKSTLNVHLRTHTGEKPYKCDLCEKAFKQTHQLKYHKYSAHNGPPVAMKKKPSKLDSSMDDDNAANKSPTEISTSGYTYSCPICSRGFKLPSSLTTHVKCHSEERKFICKECGNLFKRAEHLRIHINGVHLKRKPYACDYCSKTFAQSGDRNIHMKSHTHEKPYQCKYCQKGFKLQKSLRAHERIHTGEKPFTCEICTSDFISYNALAIHTMKHTDEEKEMIKDKTILEVQNSFKNETQPSETTIMTILL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -