Ctib024821.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
ZFY
Assembly
GCA_963669355.1
Location
OY770263.1:157749219-157756740[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0061 0.68 11.9 1.7 2 23 187 209 186 209 0.94
2 20 2.7 3.1e+02 3.5 4.5 3 21 268 286 267 287 0.92
3 20 0.2 23 7.1 0.1 2 23 341 361 340 361 0.93
4 20 0.29 32 6.6 2.0 1 23 367 390 367 390 0.92
5 20 0.0047 0.53 12.2 1.1 1 23 401 423 401 423 0.98
6 20 0.0015 0.16 13.8 1.3 1 23 429 452 429 452 0.94
7 20 0.00028 0.032 16.1 4.9 1 23 463 485 463 485 0.98
8 20 0.00063 0.071 15.0 0.5 2 23 492 514 491 514 0.96
9 20 2.9e-06 0.00033 22.3 2.0 1 23 525 547 525 547 0.99
10 20 0.0016 0.18 13.7 1.8 1 23 553 576 553 576 0.95
11 20 0.032 3.6 9.6 0.3 1 23 591 614 591 614 0.98
12 20 0.0009 0.1 14.5 0.9 1 21 625 645 625 646 0.95
13 20 0.00029 0.032 16.1 2.6 1 23 653 676 653 676 0.98
14 20 2.9e-06 0.00033 22.3 0.7 1 23 687 709 687 709 0.99
15 20 0.00088 0.099 14.5 0.7 1 23 715 738 715 738 0.98
16 20 1.5e-05 0.0016 20.1 2.7 2 23 750 771 749 771 0.98
17 20 0.0017 0.19 13.6 0.2 1 23 777 800 777 800 0.97
18 20 0.0003 0.033 16.0 3.6 1 23 811 833 811 833 0.99
19 20 0.0066 0.74 11.8 1.3 1 23 839 862 839 862 0.97
20 20 0.1 11 8.1 0.0 1 20 873 892 873 895 0.92

Sequence Information

Coding Sequence
ATGTGTCTTAAAAAATTATGCAGAACTTGCTTAAGCTCGACAGAACTAGTGTTTCCGCTTTTTGATACGGAACTAATGGGATTCTGCAATGCCGCTGAGATTTTGGAAAAGGTTACTTCTGTCCCACTTTACAATGAAGACAACATGCCGGATCATATTTGTGTCATCTGCTTTTGCGAAATTAAGCGAGCCTATTCATTTAAAATGAAATGTGAAAAATCGCAAATAGTATTGAGTCAGCTAAAAGAAGtcaaaattaacttaaaaaaattaaaagatatccCAGATCAACATGAATTTGGGAGTGAAAATAAATGCATAACTTTGAAGGAGGAACCAGAAGAAATCTTGGATCTCTATGATTATGATTATGACGACATTATTGTGCAAGATAATGCAATTACAAGTGAATTGGAGTTAAATCGAAAATCACCAATATCTGACTTCGTGAAAGTAGAACTTGATTTAGAGAATTTTAAAACTGAACCTGAGCTGAACATTCAAGACATCCAAGACATCGAATGCTGTGACAATGAATGCAAGGCTGATAAACAATTGAAATGTCGAACTTGTGGAAAACAATATGAATCGCTTGACTTATTCTGCAGACACATAGTTTCAGATCATATAGAAGAAAAGCTGTGCAAACTCTGCAATGAAGAATTCGATTGTAGTGCAATTGGACACTCGGTTAACCATCTTCCATCGGGCTTTTTGAATAAATCTACTCATGGAAAAGAACTTGAGGCAGGGGAAGATttagaaaaacaaattgaaaacgtACAAAACACTGGAAAGTTTTGTCAACAATGTTCTAGGCATTTTACAAATTCAAAAGTGTTTAGACTGCATGTGTGTTCGGAAATTTTAGCAATCCAAAATGATATGGACGTGGAAatggaaaacaaaaaacatacaaAACATCCATCTAAATGTGAGAATATTCGACCAGGCCAATCTAGTGATAGCCATATGAAagcaaaacacaaaaaaaaattgtcacagCCACAAGCAAAGATTCCATGTAGCGTGTGCTCGAAATTGATTAGTAAAGCTGGTTTAAAAGAACACATGCGGATCCATACAGGTGAGACtccgtttcaatgtaaattatgTTCGAAAAAATTCGGAATTCGCAAATTGCTGTCATTTCATATGGAGATGAAACATATAAATGAATTGCCTGATCGTAAGCCGAGGTTTCAATGCAGCGTTTGTTCTAAAATTAGCGGTTGTCAGGCAGATTTAAACCGGCATATGCGTATACATACAGGAGAGAAGCCGTTTTCATGTGATGTCTGTTCGGAAAAGTTCCGACATCGAAATACACTAGTAGTTCATATTTCGGCAAAACACTCAAATACATTACCAGATTCTAAACCAAAGCATCAGTGTGAAGTTTGCTCGCATATTTTCGCCCATCAATTCGGTTTAGTCAAACATATGCGTACGCATAAACGCAATAAGCTATTGCAAtgtgaaatttgttttgtaaaATACCGAAACAGCAAAGCGTTGATAACTCATATGGAAACAAAACATTCAAATGATTCGCCTAGTGATGCACCAAAGTATCAATGTAGTTATTGCTCGGAAATGTTTAAACATAACAGCGATTTAATTATTCATGTGCGTAGCCACACAAGTGAGAAGCTATTTGAATGTAAATTATGTTTGGAAAAATTCCGCCACAATCGGTCATTGATGATTCATATGGGAGtaaaacattcaaaaaaattGCCTCCGGTTAAACCGAATTTTCGAACTCTGTTTCAATGTGGATTTTGTTCAGTAAAATACGGACGTGGCCAATCATTGATAGCACATATGGAAACAAAACATTCCAATGATTTGTATAGTGATGATTCGAAATATCAATGTGGTTTTTGTTCGGAAATGTTCAAACGTAACATCGATTTGATCAGACATGTTTGTAGTCCCACAGACAAGAAGCCATTTCAATGTGAATTATGTTTGGAAAAATTTCGTCACAATCAATCGTTGACGATTCATATGGAAACAAAACAtccaaataatttgaatgcttTGGATTTGAACTATGAATGTAGTAtttgttcgaaaattttcaatgatTATAACGATTTAATGAGTCACATGCGTAGTCACAAAGATGATAAGCTGTTTGAATGTGAATTTTGTTCGGCAAAATATCGAAACAGCGTAACGTTGATAACTCATATGGAAACAAAACACTCACATGATTTGCGTAGTGATGAATCGAAAAACCAATGTAGTTTTTGCTCGAAAACATTCAAATACAGCAGAAATTTAGTCAATCATATGCGATTGCACACATACGATAAGCTGTTTCAATGTGAATTATGCTCCGAACAATTCGGAAACAATCAAACGTTGGTGATACATATGGAAATAAAACACTCAAACGATCTGCCTGCTGATGGTCCAAAGTATCAATGCAGTGAttgttcaaaaatttttcactaCAACTGCGATTTAATCGGTCATATGCGAATCCACACAAATAGCTTCTCATTTAAATGTAAATTCTGTACGGAACAATTCCGCCTTGAACAATCGTTGGTGGTCCATATGGAATCAAAACACCCAACTAAATTGTCTGCTGTAGAACCGAACTATCAATGTATTATTTGCCCCAAAGTGTTTGAAAATGTTCTTGAATTAGTCAGTCATATGCCTAGTCACACAGACGAGAAACTTCAATGTGAACTATGTTCGGAGTAA
Protein Sequence
MCLKKLCRTCLSSTELVFPLFDTELMGFCNAAEILEKVTSVPLYNEDNMPDHICVICFCEIKRAYSFKMKCEKSQIVLSQLKEVKINLKKLKDIPDQHEFGSENKCITLKEEPEEILDLYDYDYDDIIVQDNAITSELELNRKSPISDFVKVELDLENFKTEPELNIQDIQDIECCDNECKADKQLKCRTCGKQYESLDLFCRHIVSDHIEEKLCKLCNEEFDCSAIGHSVNHLPSGFLNKSTHGKELEAGEDLEKQIENVQNTGKFCQQCSRHFTNSKVFRLHVCSEILAIQNDMDVEMENKKHTKHPSKCENIRPGQSSDSHMKAKHKKKLSQPQAKIPCSVCSKLISKAGLKEHMRIHTGETPFQCKLCSKKFGIRKLLSFHMEMKHINELPDRKPRFQCSVCSKISGCQADLNRHMRIHTGEKPFSCDVCSEKFRHRNTLVVHISAKHSNTLPDSKPKHQCEVCSHIFAHQFGLVKHMRTHKRNKLLQCEICFVKYRNSKALITHMETKHSNDSPSDAPKYQCSYCSEMFKHNSDLIIHVRSHTSEKLFECKLCLEKFRHNRSLMIHMGVKHSKKLPPVKPNFRTLFQCGFCSVKYGRGQSLIAHMETKHSNDLYSDDSKYQCGFCSEMFKRNIDLIRHVCSPTDKKPFQCELCLEKFRHNQSLTIHMETKHPNNLNALDLNYECSICSKIFNDYNDLMSHMRSHKDDKLFECEFCSAKYRNSVTLITHMETKHSHDLRSDESKNQCSFCSKTFKYSRNLVNHMRLHTYDKLFQCELCSEQFGNNQTLVIHMEIKHSNDLPADGPKYQCSDCSKIFHYNCDLIGHMRIHTNSFSFKCKFCTEQFRLEQSLVVHMESKHPTKLSAVEPNYQCIICPKVFENVLELVSHMPSHTDEKLQCELCSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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