Ctib032896.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
ZBTB41
Assembly
GCA_963669355.1
Location
OY770264.1:15097656-15101832[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.3 33 6.6 0.3 3 23 172 193 170 193 0.95
2 17 3.1e-06 0.00035 22.2 1.9 1 23 256 278 256 278 0.99
3 17 0.00019 0.021 16.6 2.6 2 23 318 339 317 339 0.96
4 17 0.0037 0.42 12.6 1.2 1 23 345 368 345 368 0.96
5 17 4.3e-06 0.00049 21.8 3.9 1 23 382 404 382 404 0.99
6 17 0.56 63 5.7 7.1 1 23 410 433 410 433 0.94
7 17 0.0003 0.034 16.0 4.7 1 23 447 469 447 469 0.98
8 17 5.3e-05 0.006 18.4 1.8 1 23 475 498 475 498 0.98
9 17 0.0003 0.034 16.0 4.7 1 23 512 534 512 534 0.98
10 17 4.6e-05 0.0052 18.6 2.0 1 23 540 563 540 563 0.98
11 17 4.3e-06 0.00049 21.8 3.9 1 23 577 599 577 599 0.99
12 17 0.56 63 5.7 7.1 1 23 605 628 605 628 0.94
13 17 0.0003 0.034 16.0 4.7 1 23 642 664 642 664 0.98
14 17 5.3e-05 0.006 18.4 1.8 1 23 670 693 670 693 0.98
15 17 0.0003 0.034 16.0 4.7 1 23 707 729 707 729 0.98
16 17 0.00052 0.058 15.3 1.8 1 23 735 758 735 758 0.98
17 17 9.5e-06 0.0011 20.7 4.4 1 23 772 794 772 794 0.99

Sequence Information

Coding Sequence
ATGGCCTCTGTATTCGACGAGAAAATCGAACCCGCAAGGCGCACTGTAGCTGATCTGTTGGCGATGTTTACATCCGTTCAGGTCGACAAAGAAGATGACTTTCCGCATAACATTTGTAACATTTGCCTTAACGAAATTCAACAGgcgtatttatttgatttgaaatgtaaGAAATCAGAAATTATTTTACATCAATTGAGAGAACTCAGAGTTACCTTAAAAAAACTGAACGTAATACCACAACAAAATGAAATTGCTAGCGAAGTTGCTGGTGAACTTGAAAGTAttctaaaagaaaattttaagatagaagaTGTCAGGAGTCTCTGTGATCGCACCATCATCGATTCCGAATATTCTGATCAGAACAACCTTATTATAAACGACAATGAAAATGAGGAAGAATCGGAATTCAGCGAAATATCGTCAAATCTTCAAGTTTTCGAACATGAACGTGTCCCGAATTTTCATGTGTCTTTTAAATCAGAACCCGAGCTGGATATTGGCATAGATTGCTCGACTTGTTTAAAACAGTTTCAATCGCTGGATATGTTCCGCGGTCACATAGTAACTGATCATTTAGAGGAAAACATTTGCAGACTTTGCAATGAAGaatttgaATGCAGTCAATTCGAACATTCGGCCAAACATCTTCCATTTAGCGAATCGGAGAATCCATCTGGCTCAAGTGAAGAGTCAATAAGACAAACTGAAAAGGTGCATATGAAAGCAATACACAAAGACGAATTCGCTGGAAAACATGAATTCCAGTGTAAGATTTGTTCAAAAGTTTTCGTTAATAGATACCGATTAAAAGATCATGTGCGTactcataccggtgaaaaaccgtttgaCTGTGAACTATGTCCGGAAAAGTTAAGAAACTATCAAACATTTCTATACCGTAaacgaactaagcacacagatgaaTTCGTTGGCAAACGTGAACTCCATTGTAAGATTTGTTCAAAAGTTTTCGTTAAAAGATACCGTTTAGTAAATCATATGCGTCTGCATACCGGTGAAAACCCGTTTCAATGTATATTATGCCCGGAAAAATTTCGAAGCAAGCAGACGCTGCTAGGCCACCaacgaactaagcacacagatgaaTTGATTAGTGATGATGAACCAGTACCAGAATTTCAATGCAgtgtttgcaacaaagttttcgGTTACAAATGTTTATTAAGAAATCATATGCGTACTCATACCGGCGAAAAACCGTTTGATTGTTCATTATGTTCGAAAAAGTTTAGACACAGAAAATCGCTGGTATGCCATAGAATAACTAAGCACTCAGATGAATTGATTAGTGATGATAAACCAGTACCAGACTTCCAATGCAgtatttgctacaaagttttcggTTACAAATGTTTCTTAAGAAATCATATGCGTttgcataccggtgaaaaaccgtttcaatgtaaattatgcCCGGAAAAATTTCGAAGCAAGCAGATGCTGCTAGGCCACCAACGAACTAAGCACTCAGATGAATTGATTAGTGATCATAAACCAGTACCAGACTTCCAATGCAgtatttgctacaaagttttcggCTACAAATGCTTCTTAAGAAATCATATGCGTctgcataccggtgaaaaaccgtttcaatgtaaattatgcCCGGAAAAATTTCGAAGCAAGCAGACGCTGCTAGGCCACCaacgaactaagcacacagatgaaTTGATTAGTGATGATGAACCAGTACCAGAATTTCAATGCAgtgtttgcaacaaagttttcgGTTACAAATGTCTATTAAGAAATCATATGCGTACTCATACCGGCGAAAAACCGTTTGATTGTTCATTATGTTCGAAAAAGTTTAGACACAGAAAATCGCTGGTATGCCATAGAATAACTAAGCACTCAGATGAATTGATTAGTGATGATAAACCAGTACCAGACTTCCAATGCAgtatttgctacaaagttttcggTTACAAATGTTTCTTAAGAAATCATATGCGTctgcataccggtgaaaaaccgtttcaatgtaaattatgcCCGGAAAAATTTCGAAGCAAGCAGATGCTGCTAGGCCACCAACGAACTAAGCACTCAGATGAATTGATTAGTGATCATAAACCAGTACCAGACTTCCAATGCAgtatttgctacaaagttttcggTTACAAATGTTTCTTAAGAAATCATATGCGCctgcataccggtgaaaaaccgtttcaatgtaaattatgcCCGGGAAAATTTCGAAGCAAGCAGACGCTGCTAGGCCACCaacgaactaagcacacagatgaaTTGATTAGTGATGATGAACCAGTACCAGAATTTCAATGCAGTGTTTGCAAAAAAGTTTTCGGTTACAAATGTCTATTAAGAAATCATATGCGTACTCATACCGGCGAAAAACCGTTTGATCGTTATGTTCGAAAAAGTTTAGACACAGGAAATCGCTGA
Protein Sequence
MASVFDEKIEPARRTVADLLAMFTSVQVDKEDDFPHNICNICLNEIQQAYLFDLKCKKSEIILHQLRELRVTLKKLNVIPQQNEIASEVAGELESILKENFKIEDVRSLCDRTIIDSEYSDQNNLIINDNENEEESEFSEISSNLQVFEHERVPNFHVSFKSEPELDIGIDCSTCLKQFQSLDMFRGHIVTDHLEENICRLCNEEFECSQFEHSAKHLPFSESENPSGSSEESIRQTEKVHMKAIHKDEFAGKHEFQCKICSKVFVNRYRLKDHVRTHTGEKPFDCELCPEKLRNYQTFLYRKRTKHTDEFVGKRELHCKICSKVFVKRYRLVNHMRLHTGENPFQCILCPEKFRSKQTLLGHQRTKHTDELISDDEPVPEFQCSVCNKVFGYKCLLRNHMRTHTGEKPFDCSLCSKKFRHRKSLVCHRITKHSDELISDDKPVPDFQCSICYKVFGYKCFLRNHMRLHTGEKPFQCKLCPEKFRSKQMLLGHQRTKHSDELISDHKPVPDFQCSICYKVFGYKCFLRNHMRLHTGEKPFQCKLCPEKFRSKQTLLGHQRTKHTDELISDDEPVPEFQCSVCNKVFGYKCLLRNHMRTHTGEKPFDCSLCSKKFRHRKSLVCHRITKHSDELISDDKPVPDFQCSICYKVFGYKCFLRNHMRLHTGEKPFQCKLCPEKFRSKQMLLGHQRTKHSDELISDHKPVPDFQCSICYKVFGYKCFLRNHMRLHTGEKPFQCKLCPGKFRSKQTLLGHQRTKHTDELISDDEPVPEFQCSVCKKVFGYKCLLRNHMRTHTGEKPFDRYVRKSLDTGNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-