Basic Information

Gene Symbol
ZFY
Assembly
GCA_963669355.1
Location
OY770263.1:158108635-158110718[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.002 0.22 13.4 0.2 2 23 115 137 114 137 0.95
2 16 0.15 16 7.5 2.7 2 19 178 195 177 197 0.93
3 16 1.8e-05 0.002 19.9 1.5 1 23 237 259 237 259 0.98
4 16 0.00023 0.025 16.4 3.8 1 23 265 288 265 288 0.96
5 16 0.026 2.9 9.9 1.9 1 23 299 321 299 321 0.97
6 16 0.0019 0.22 13.4 3.6 2 23 328 350 327 350 0.96
7 16 6.4e-07 7.2e-05 24.4 0.4 1 23 361 383 361 383 0.98
8 16 0.019 2.1 10.3 5.4 1 23 389 412 389 412 0.97
9 16 2.1e-06 0.00024 22.8 2.4 1 23 423 445 423 445 0.99
10 16 0.039 4.4 9.3 4.3 1 23 451 474 451 474 0.97
11 16 1.2e-05 0.0014 20.4 3.2 1 23 488 511 488 511 0.98
12 16 0.0077 0.87 11.6 3.6 1 23 522 544 522 544 0.98
13 16 5.3e-05 0.0059 18.4 0.6 1 23 550 573 550 573 0.98
14 16 3.2e-05 0.0036 19.1 0.4 2 23 583 604 582 604 0.98
15 16 1.3e-05 0.0015 20.3 2.5 1 23 610 633 610 633 0.98
16 16 9.8e-05 0.011 17.5 3.1 1 23 644 667 644 667 0.98

Sequence Information

Coding Sequence
ATGATCTTAAATCAACTGAAAACagttaaaattaacttaaaacgaCTAAAAGATCTTTCATATCGTAGTGAAACTGACAGCGAAATTGaatgcaaaattcaaaaaaatgtaaaaaaggaAACAGAAGAAATAGAACAAAATTTCGAACTCTGTGACTATGACGAAATTATCATCGAAGGTAATGAAAGTGaaagtaaaagtaaaagtaAGAAATGGTCAAATATTCAATTTGCAAAAGTTGAATATCTACCAAATGTCCAAGTGGAGTTTAAAAATGAGCCCGAATTGGAAATTGAAGACATCGATTGTGACGGCAACGAATTCAAGGCTGAAGAGCAATTGAAATGTTTGGACTGTGAAAAACAATTTGAATCGATTGAACTATTCAACAGACATATAGTAACAGATCATATAAAAGAAAAACTGTGTAAACTTTGCAATGAAGAGTTTGACGGCAGCCAATTTAATCATTCGCTCAAACATCTTCCGATTAGCTTTTTGGATGACATTAACCACGAAAACGAAACAAAATATTGTCAACATTGCTCTAAATATTTTGCagatttaaaaatgttaagattACATGCGTGTCCGTCAAATGCATCGAATAGATCCGAttacaataatgaaaaactCTTAGAACAAGAGACTGATCAGAGCCATATGGAAATTAAAGAGACAGAAGAACTTATTGATTCAAAGTCGAAACATCAATGTAGCGTTTGTTCGAAGGTTTATGGTCGTAAAAATAGTTTATCTATTCACATGCGTATCCATACAGGTGAGACtccgtttcaatgtaaattttGTTCGGAAAAATTTCGACATAGATATTTGCTGCGAGTTCATATAGAAATCAAGCATATAAATGAACTTCCTGACGGTAAGCCGAAGTATCAATGTAATGTTTGTTCGAAAATTTTTGCCTGTAAGAATCATCTCGTCGGACATGTGCTTATTCATACGGGCGAGAGACCATTACAATGTAAATTTTGTTCACAAAAATACCGACGCAAACATTCGCTGGCGACTCATGTGAAAATGATACACCCAGAAGAATTGGCAAATGATAAGCCGAATTATCAATGTagtatttgctcaaaaagcttTATTTATAACAGCGACTTAGTCTCACATATGCTTATTCATATTGATGAGAAGCCGTTTCAATGCGAATTTTgttctaaaaagttcaaattcagGCATATGGTACGAGTTCACCTGGAAAAGAAGCACACGAATGAATTGCCTGTTGGTAAATCAACATATCAATGTAacatttgctctaaagtttttggCTATAATTGCGAATTAATCAAACATATGCGTAGCCATACGGATGAGAAGCCGTTTCAATGTAAACTATGCTCTAGTAATTTCCAATACAGACACTTGCTTAGAGTGCATATGGATAGGAAACACATAAAGGAATTGCCCGAAAATAAGCCTAGCGAGAAACCATTTCAATGTAAATTATGTTCGAAAAAATTTCGCCACAATCAATCACTAGTGGCCCATATGCAATCGGAACATACTAATGAATTGAGGGTTACTAAAACGAAACATCAATGCAAGGTTTGTTCGAAAGTTTTTGGTTGCAATAGCCGTTTAGTCAGACATATGCTGATCCATTCTGGTGAGAAACCATTTCAATGTGAAGTGTGCTTGGAAAAATTTCGCCGAAATCAATCGTTAGCGATCCATATGGAAACGAAACATGAACTGCCCGATGCTAAACCAAAGAATCAATGTagcatttgctcgaaaattttcGGTTATAATAACGATTTAGTCAATCATATGCGTAGCCACACAGGTGAAAGCCCATTTCAATGTAAGGTATGCTCGGAAAAATTTCGATATAGTCAATCGCTGGTTCGACATATGAAAATGAGACATTCCGGCGAATTGAATGGTAACAAGCCGTATTAccaatgcagtgtttgctcAAGAACTTATAAATATAGACTGACGCTGAAAATTCATATGAAAACAAAACATGGAATGGAATTTACTGATTAA
Protein Sequence
MILNQLKTVKINLKRLKDLSYRSETDSEIECKIQKNVKKETEEIEQNFELCDYDEIIIEGNESESKSKSKKWSNIQFAKVEYLPNVQVEFKNEPELEIEDIDCDGNEFKAEEQLKCLDCEKQFESIELFNRHIVTDHIKEKLCKLCNEEFDGSQFNHSLKHLPISFLDDINHENETKYCQHCSKYFADLKMLRLHACPSNASNRSDYNNEKLLEQETDQSHMEIKETEELIDSKSKHQCSVCSKVYGRKNSLSIHMRIHTGETPFQCKFCSEKFRHRYLLRVHIEIKHINELPDGKPKYQCNVCSKIFACKNHLVGHVLIHTGERPLQCKFCSQKYRRKHSLATHVKMIHPEELANDKPNYQCSICSKSFIYNSDLVSHMLIHIDEKPFQCEFCSKKFKFRHMVRVHLEKKHTNELPVGKSTYQCNICSKVFGYNCELIKHMRSHTDEKPFQCKLCSSNFQYRHLLRVHMDRKHIKELPENKPSEKPFQCKLCSKKFRHNQSLVAHMQSEHTNELRVTKTKHQCKVCSKVFGCNSRLVRHMLIHSGEKPFQCEVCLEKFRRNQSLAIHMETKHELPDAKPKNQCSICSKIFGYNNDLVNHMRSHTGESPFQCKVCSEKFRYSQSLVRHMKMRHSGELNGNKPYYQCSVCSRTYKYRLTLKIHMKTKHGMEFTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
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80% Identity
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