Basic Information

Insect: Chorisops tibialis
Gene Symbol: Os03g0733400
Assembly: GCA_963669355.1
Location: OY770263.1:15107654-15123328[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00018 0.02 16.7 0.8 2 23 632 653 631 653 0.96

2 12 8.7e-05 0.0098 17.7 1.4 1 23 660 682 660 682 0.98

3 12 2.8e-07 3.1e-05 25.5 1.3 1 23 699 721 699 721 0.99

4 12 8.6e-06 0.00097 20.8 1.2 1 23 730 752 730 752 0.98

5 12 1e-05 0.0012 20.6 0.7 1 23 758 780 758 780 0.98

6 12 5.4e-05 0.0061 18.3 3.7 1 23 786 808 786 808 0.98

7 12 1.1e-06 0.00012 23.7 0.5 1 23 814 836 814 836 0.95

8 12 0.014 1.5 10.8 2.8 1 23 842 864 842 864 0.98

9 12 7.9e-05 0.0089 17.8 2.1 1 23 870 892 870 892 0.98

10 12 9.6e-07 0.00011 23.8 2.5 1 23 898 920 898 920 0.99

11 12 6.8e-06 0.00076 21.2 1.4 1 23 926 948 926 948 0.99

12 12 0.00029 0.032 16.1 0.0 1 23 954 976 954 976 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00018	0.02	16.7	0.8	2	23	632	653	631	653	0.96
2	12	8.7e-05	0.0098	17.7	1.4	1	23	660	682	660	682	0.98
3	12	2.8e-07	3.1e-05	25.5	1.3	1	23	699	721	699	721	0.99
4	12	8.6e-06	0.00097	20.8	1.2	1	23	730	752	730	752	0.98
5	12	1e-05	0.0012	20.6	0.7	1	23	758	780	758	780	0.98
6	12	5.4e-05	0.0061	18.3	3.7	1	23	786	808	786	808	0.98
7	12	1.1e-06	0.00012	23.7	0.5	1	23	814	836	814	836	0.95
8	12	0.014	1.5	10.8	2.8	1	23	842	864	842	864	0.98
9	12	7.9e-05	0.0089	17.8	2.1	1	23	870	892	870	892	0.98
10	12	9.6e-07	0.00011	23.8	2.5	1	23	898	920	898	920	0.99
11	12	6.8e-06	0.00076	21.2	1.4	1	23	926	948	926	948	0.99
12	12	0.00029	0.032	16.1	0.0	1	23	954	976	954	976	0.97

Sequence Information

Coding Sequence: atGGATCTCAAACGAAGAAAAAAGAGTCAAATTTGGGAATATTTCACAGTCGTTGACAGCTACTATGCCAAATGCGACATTTGTAAAAACAACCTGTGTTATAAGACTTCAGTGACAAACTTAAAACGACATATGTTTGCAAGGCATCCAACGGTTAAATTGTCAGGCGTAGTTCTATCTAAAAGTAGTTTTGGACATACGACTGTGGCTATTGAGAGTTTGGAAAATTACGGAGACGTTGCTATGATGCCTACTATAGAACCAAAACCAAGCATTAGCACGAATGTCCGCGCCGAACCCATGAACCAACAAAGAAATCTTGCAAAGCGACCGGCATTAGTTCAGGATACTTTGGACAATTTCGTGCCAAAGGTGTTGGCATTAacagcaaaacaaaaaatggatGAAGATCTAATGTATCTGTTTACCATTGACTTCCAACCGTTTAGCATTGTAGAGGACTACGGATTTAAGCGATATTCAAATGGTCTTAATCCATCTTATGTTATTCCGAATCGGCGATATATTTCTAACATAATGCTGCCTGCACTGTACGACAAAGTTTTAATGCAAGtgaaacttttatcaaaaacaattaCGAAGTGCAGTTTAACTGCAGATTGTTGGACGTCTTCTAACAATGAAAACTTCATAGGAATAACCGCTCATttcattgatgatgattttttctttaaatcatTTGTACTGGGATGCGTAAGCTATAACGAAACTCATAATGGCTTAAGTTTAGCAAAAATACTAAAGGAGTCAACTGATGAATGGAATCTTTCAGAGAAAATTTGCCTTGCAGTGTCTGATAATGCAGCCAACATGAAGTCAGCAATTATAACTCATTTAGGCTGGAACCATTTCGGATGTCTGGCTCATACTATTAATCTTGTACTACAAACCAGCCTCAAGTTTCTTTCGTCTTTGATTGCAAAAGTACGCAAAATAGTGGTGTGTTTTAAGCGTAGCTCCGCAACTTACGAACAATTTTTGCAGTGCCAGCAAAATACAGGAAAGGAGCAAAAAAAACTGCTGCTCGATGTTGTAACGCGATGGAACTCGACTTACTATATGCTAGAGCGAGTTCTCGAGCTGCAAGATGCAGTTAAAATAACGGTTGCATTAATAGACCAAGATCTTCCGGTATTGTCGACGGATGATTGGGAAATAATGGAGCAGGCGGTTAAAGTTTTAAAGCCATTTGAAGCCTTTACAAAAATCACAAGTGGACACAAGTATGTTACAGCTTCGCTTGTAGTGGTACTAATCCGAGGTTTAAAGAATGTTGTTGAGCAATTGGAAAATGGAAATAATCACGCCATTGTTCAATCTGTTATATCTACCATCAAATCTGGGCTAAGTGCCAAGTTTGACAACCTCGAAATCAATAATACTCTTTGTATTGCAACATTTTTGGACCCGCGCTTCAAAAATATTGCATTCCAATCGCATTTGACAGCGGATCGGGTGAAAGAAAATGTAATAAGCGCCGTTGCCAGCAGAATTTGTCATGAGCAATCTGAAACATCCGTCAAACCAGTAATTGAGCAGCATCCAATAGAATCAGTTGAATCTGAACTGAACATATGGAGCATATATGACAAAGATGCATCGCAAGTGAAACCTGTTGAAACGCCAACATCAAGTGCAATCATCGAAGTCCAACGGTATCTCGAAGATAAGCTGCTTTCGAGAAATGAAGATCCTCTATTGTGGTGGCGGCATAATAAACATAACTACCCGAATCTTTGCCAAATTGCCAGAGAAAATTTATGCGCTATAGCAACTTCTATGCCTTATGAGCGTCTCTTTTCCAAGGCTGGAAACGTTTTAAATGAGCGAAGAGCCAGACTGCAATCGAAAGCACTACCTAAACCGAAACTAGAATGTGAAATATGTAAAAAAGTTTTCGATAAAAATTATCGATTGTTACGGCACAGGAACGTACATAACGCCGAAGGAAAACCATACGAATGTAAAATATGTAAAATTCGTTTTGTTCACGAGAGTAGCATGCGACGACATTTAATCATACATAGCGAAACATTAAACGAAGTCTCGACGGTATTAAATCAGAAAACGAATTTTCAATGTACCGAATGTCCGAAAGAATTTTCAAAACAGGAATCTCTTTCGTCGCATATGCGTACGCATCGCATCACGATGAGCGGTAAAAAGTATCGATGTGATTTATGTCCGAAAGTATTTTCACGTTTGAATTTACTTACGCGCCATTCGAAATCACACGATGAACTACGAAATTTTCAATGCAATTTATGCGATAAGAAGTTCGCATTGAATTCACAACTAATCGATCATCTTAATCGACATAACGGTGTTAAACCGCATGTATGTCCGATTTGTAATAAGGGCTTTCAACAATCCTGTACGCTTAAGGATCATCTTCGAACGCATAGCGGCGAAACACCATTCTTATGTGCAGAATGTGGCAAGGCCTTTAACAATAGCAGCAATCTAAGACAACATTTACTTCGACATACTGGAGCAAAACCATTTCATTGTCCCGAATGTCCCAGCCGTTTTACATGTAAGGGCGGTCTAAAATCACATATGGCTACGCATATGCAACAAAAGCCGTACAGTTGCGATCAATGCGATTCGAAATTTACGAAACCCTATTCATTGAACAAACACAAACGTATTCATACCGGCGAAAAACCATATTCGTGTGAAGTTTGTGGAATGAAGTTCAACTCATCCGATCATGTTAAACGACATATGCGCactcataccggtgaaaaaccatATCGATGTAAATTTTGTGATCGCGCTTTCGCCCAAAGTAACGATCTAGTTAAGCATACACGAAGTCATGTTGGTGAAAAAACTTACGTGTGCACGGAATGCCCGGCAGCATTCCGTTTGTACTCTGAATTACGTGTACACATTCAAGGGCACTATCGGCAAAAGAAAAGTATTGGTGGTGGCATGTCCGGATCCGATACGAATTCGAATTCACACGATGATAGCTTATTAATCGAAAGTTCAGAACAATTTCAAGAACTTTTAGATTTTTCTACACGTCACGGTGCTACTTTTGATCAAATTTGTGTAAAATGCTTGAACGAAATTGAACGAACGTATGTTTTTATAAAAAGATGCGAACTATCGAACACAATTATAAAGAAACATTTGCGACAGATTACTAATTCGAATGTTTCTATGCcgctaaattttaaaatcaatgaaATCGAAGATAATAGAAATTCAAAGGTCAAACAACAAGgctcgacaattacagaagtaATTGATAACTCAGTCGATACGATTTCAGAGGATGATCCATTGATAGCTGATCGAAAAATTGCAGAAATCGATAAATTAGACAATATGAAAGGACAAATAGATCATTTTTCCGATAATGAAGTATTTGTGAAGCAGGAAATTTTTACAGACGATGAAATGCCACTCAAAACTTATAGTTCATTTTTCAATAATGAAAAGTTTACCAAAGATAATGATAAGCCAATTCACAGTTTTTTACATTGCATCGATAGTTTGACAGAGCCTTCAATCGAACAAGATATAAAAAATGAACCTGACCTTGATATCCATACGGATGAAGAAGATAATGTTTCAGATAAATTTATGAGTACAGAATTATATGGGCTATGCAATACTGGTTCGTAG
Protein Sequence: MDLKRRKKSQIWEYFTVVDSYYAKCDICKNNLCYKTSVTNLKRHMFARHPTVKLSGVVLSKSSFGHTTVAIESLENYGDVAMMPTIEPKPSISTNVRAEPMNQQRNLAKRPALVQDTLDNFVPKVLALTAKQKMDEDLMYLFTIDFQPFSIVEDYGFKRYSNGLNPSYVIPNRRYISNIMLPALYDKVLMQVKLLSKTITKCSLTADCWTSSNNENFIGITAHFIDDDFFFKSFVLGCVSYNETHNGLSLAKILKESTDEWNLSEKICLAVSDNAANMKSAIITHLGWNHFGCLAHTINLVLQTSLKFLSSLIAKVRKIVVCFKRSSATYEQFLQCQQNTGKEQKKLLLDVVTRWNSTYYMLERVLELQDAVKITVALIDQDLPVLSTDDWEIMEQAVKVLKPFEAFTKITSGHKYVTASLVVVLIRGLKNVVEQLENGNNHAIVQSVISTIKSGLSAKFDNLEINNTLCIATFLDPRFKNIAFQSHLTADRVKENVISAVASRICHEQSETSVKPVIEQHPIESVESELNIWSIYDKDASQVKPVETPTSSAIIEVQRYLEDKLLSRNEDPLLWWRHNKHNYPNLCQIARENLCAIATSMPYERLFSKAGNVLNERRARLQSKALPKPKLECEICKKVFDKNYRLLRHRNVHNAEGKPYECKICKIRFVHESSMRRHLIIHSETLNEVSTVLNQKTNFQCTECPKEFSKQESLSSHMRTHRITMSGKKYRCDLCPKVFSRLNLLTRHSKSHDELRNFQCNLCDKKFALNSQLIDHLNRHNGVKPHVCPICNKGFQQSCTLKDHLRTHSGETPFLCAECGKAFNNSSNLRQHLLRHTGAKPFHCPECPSRFTCKGGLKSHMATHMQQKPYSCDQCDSKFTKPYSLNKHKRIHTGEKPYSCEVCGMKFNSSDHVKRHMRTHTGEKPYRCKFCDRAFAQSNDLVKHTRSHVGEKTYVCTECPAAFRLYSELRVHIQGHYRQKKSIGGGMSGSDTNSNSHDDSLLIESSEQFQELLDFSTRHGATFDQICVKCLNEIERTYVFIKRCELSNTIIKKHLRQITNSNVSMPLNFKINEIEDNRNSKVKQQGSTITEVIDNSVDTISEDDPLIADRKIAEIDKLDNMKGQIDHFSDNEVFVKQEIFTDDEMPLKTYSSFFNNEKFTKDNDKPIHSFLHCIDSLTEPSIEQDIKNEPDLDIHTDEEDNVSDKFMSTELYGLCNTGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00324608;
90% Identity: iTF_00324608;
80% Identity: iTF_00324608;