Ctib015631.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
ZFY
Assembly
GCA_963669355.1
Location
OY770262.1:322047364-322065973[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.036 4 9.5 0.5 2 23 199 221 198 221 0.94
2 21 0.16 18 7.5 0.3 2 23 372 394 371 394 0.93
3 21 0.00068 0.077 14.9 3.2 2 23 455 476 454 476 0.97
4 21 2.6e-07 2.9e-05 25.6 0.8 1 23 492 514 492 514 0.98
5 21 0.018 2 10.4 5.0 1 23 520 543 520 543 0.98
6 21 3.1e-05 0.0035 19.1 1.4 1 23 557 579 557 579 0.99
7 21 0.022 2.5 10.1 1.1 1 23 585 608 585 608 0.97
8 21 1.3e-06 0.00014 23.5 0.9 1 23 622 644 622 644 0.99
9 21 0.00022 0.025 16.4 0.6 1 23 650 673 650 673 0.98
10 21 4e-05 0.0045 18.8 0.5 1 23 687 709 687 709 0.99
11 21 9.8e-05 0.011 17.5 0.2 1 23 715 738 715 738 0.97
12 21 0.00051 0.057 15.3 2.6 1 23 752 774 752 774 0.99
13 21 0.0052 0.58 12.1 6.2 1 23 780 803 780 803 0.98
14 21 3.7e-05 0.0041 18.9 3.9 2 23 818 839 817 839 0.97
15 21 0.1 12 8.0 1.0 1 23 845 868 845 868 0.95
16 21 0.0016 0.18 13.7 4.6 1 23 880 902 880 902 0.98
17 21 0.078 8.8 8.4 2.0 1 23 908 931 908 931 0.97
18 21 0.0021 0.23 13.4 1.2 1 23 945 967 945 967 0.98
19 21 0.0062 0.7 11.9 3.5 1 23 973 996 973 996 0.98
20 21 2.4e-05 0.0028 19.4 1.5 1 23 1010 1032 1010 1032 0.98
21 21 0.22 25 7.0 3.2 1 23 1036 1059 1036 1059 0.97

Sequence Information

Coding Sequence
ATGAATCTCTGTGATCGCAACATCATCGATTCAGAAAGTAGAGCGAGTGACAGTATTGGATCTTACGAAGAAGAAAATGCTAACGCAAATGAGAAATTAAATCTTCAAATTGTGGAAAGAGACTGCACTCGAAATTTTCGGCTAGCATTTAAAAGAGAGCCTGAACATAGCAACCATTTTATGAAAGATGATAAAAATGAGAAAGAATTAGAACGcatcaaaattttgccaaattttcaaatcgtagCAGAAGACTGTGATCCTGAGTTTCAAATAACGTTGAAACAAGAGCCTGATCACGATAGcgctattattataaataatgcAGATTACAACGAATTAGAACTCAACCAAAACTCATCATATTTTGAAATCTTGGATGAATGTGGTCTGGAagatcaatttattttaaaaacagaGCCTGATCAGAATAACCTTGTTATAAAAGATAATGAAAATGAGGAAGAATTAGAATTCAGTGAAAAATCGTCGAATTTTGAAATTGTCGAAGAAGAATGTTTTCCAGATTTTCGTGCGACTTTTAAAGCAGAACCCGAGCTGGATATTGGCATAGATAGCAATGGCGCGGAATTGAAGTGCTCGGGTTGTTTAAAACAGTTTCAATCGCTTGATATGTTCCGCAGTCACATAGTATCTGATCATTTAGAAGAAAACAATTGCAAACTTTGCAATGaagaatttgaatgcAGTCAATTCGAGCATTCGACCAAACATCTCCCATTAGGCTACGACGAACATACAAAAATAGAACACAACGGAAAATTGCGGCAGCGCGAAGCATCAACAAGAGGGCATGTGAAATTCTTTGGCAAACCGGATTTACAATGTTGCAACGAATTAGAACTCAACCAAAActcatcaaattttgaaatcttgGATGAATACGCTCCGGAATATCAAGCTGTTTTGAAAACAGAGCCTGATCAGAATAACCTTGTTATAAAAGTTAATGAAAATGAGGAAGAATTAGAATTCAGTGAAATAtcgtcaaattttcaaattgttgaAGAAGTATGTGTCCCGGATTTTCGTGTGACTTTTAAAACAGAACCCGAGCTGGATATTGACTTTGATTGCAATGACGAGCAACTGAAGTGCTCGGGTTGTTTAAAACAGTTTCAATCGCTTGATATGTTCCGCGGTCACATAGTATCTGATCATTTAGAAGAAAACAATTGCAAACTTTGCAATGaagaatttgaatgcAGTCAGTTCGAACATTCGGCCAAACATCTCCCATTAGAATACGACGAACATATAAAAATTGAACACAACGAAAAATTGCGACACCGCgaagcaacaacaacagggCATGTGAAATTCTTTGGCAAACCTGATTTACAATGTAAGATTTGTTCaaaagttttcggttttagatGCCGTTTAGTAAATCATATGCGCACTCATACCGGTGGAAAATCGTCTGATTGTGATGATAACTCAGCATCAGACTTCCAATGTAGTGTTTGTTACAAAGTTTTCAGTCGCAAATCCGCATTAATAGATCATATGCGTTtacataccggtgaaaaaccgtttcaatgtaaattatgcACAGAAAAGTTTAGAAATAAAACCGCGTTGCTATGCCATAGACGAACTATGCACACAGATGAATTGATTAAAGAAGATAAATCAGTATCAGAATttcaatgcagtgtttgctacaaagttttcggTATGAAAACCCGATTAAGAGCTCACATGCGCactcataccggtgaaaaaccgtttgaCTGTGAATTATGTCGAGAGAAGTTTGGAAGCAGTAACGGGCTGTTATACCATAAACGAACCAAGCACACAGAAGAATTGATTAGTGATGATAAAGCAGTATCAGACttccaatgcagtgtttgctacaaagtttttgGTCGGAAATACGCATTGAGAGATCATATGCGTGTGCAcaccggtgaaaaaccgtttcaatgtGAATTATGCCCGGAAAAGTTTGGAAATAATACCGCGCTGTTATCCCATAaacgaactaagcacacagatgaaTTGATTAGTGATAATAAACCTGTATCAGACttccaatgcagtgtttgcaACAAAGTTATTGGTCAGAAATCCAGATTAAAAATTCATATGCGTATTCATACCGGTGAAAAGCCGTTTGATTGTGAATTATGTCcggaaaagtttggaaacagtaGCGCGCTGCTATGGCACAGACGGACTAGGCACACAGATGAATTGATTAGTGATGTTAAACCAGTACCAGACTttcaatgcagtgtttgctacaaagttttcggAAAGAAATGCGTATTAAGAGATCATATGCGTGtacataccggtgaaaaaccgtttcaatgtaaattttGCCCAAGAAAGTTTAGAACTAGTACCGCACTGCAGTGCCATAGACGAACTAGGCACAAAGATGAATTTATTAGGGATGGTAAACCAGTACCAGACTTACAATGCAGTGTTTGCTGCAAAGTCTTTAGTCAGAAATATCTATTAAAAAATCATATGCGTactcataccggtgaaaaaccgtttgaCTGTGAATTATGTCCGGAAAAGTTTGCAAGCAGCAACGGATTGCTATGCCATAGACGAATTAAGCACACAGATGAATTGGCTAGTGATGATAAACCAGACTTCAAATGCAGtatttgcttcaaaattttcggAATGAAATGCCAATTAAGATATCATATGCGTttgcataccggtgaaaaaccgtttaaCTGTGAATTATGTCCGGAAAAATTTGGAAACACTAGCGCACTGCTATGCCATAGACGAACCAAGCACACAGATAAACTTATAAATGATGATAAACCAGTACCAGACTTCCAATGCAGTGTTTGTTACAAAGTTTTTGGCAAGAAATACATATTAAGAAATCATATGCTTttgcataccggtgaaaaaccgtttcaatgtAATTTATGCCCAGAAAAGTTTAGAAATAATAACGCGCTGCTATGCCATAGACGAACTAAACACACCAATGAATTTATTAGTGATGATAAACCAGTGCCAGACttccaatgcagtgtttgctatAAAGTTTTCGGTCAGAAATACTTAGTAAGAAAGCATATGCGTGAGCAtgaaaaaccgtttcaatgtaaattatgcCCGGAAAATTTTCAGTGCAACGACTCTTTTAAAATCCATGTACAAACAAAACATACAGATCAAGAGACTGAAAAGCCAGATTACATATAA
Protein Sequence
MNLCDRNIIDSESRASDSIGSYEEENANANEKLNLQIVERDCTRNFRLAFKREPEHSNHFMKDDKNEKELERIKILPNFQIVAEDCDPEFQITLKQEPDHDSAIIINNADYNELELNQNSSYFEILDECGLEDQFILKTEPDQNNLVIKDNENEEELEFSEKSSNFEIVEEECFPDFRATFKAEPELDIGIDSNGAELKCSGCLKQFQSLDMFRSHIVSDHLEENNCKLCNEEFECSQFEHSTKHLPLGYDEHTKIEHNGKLRQREASTRGHVKFFGKPDLQCCNELELNQNSSNFEILDEYAPEYQAVLKTEPDQNNLVIKVNENEEELEFSEISSNFQIVEEVCVPDFRVTFKTEPELDIDFDCNDEQLKCSGCLKQFQSLDMFRGHIVSDHLEENNCKLCNEEFECSQFEHSAKHLPLEYDEHIKIEHNEKLRHREATTTGHVKFFGKPDLQCKICSKVFGFRCRLVNHMRTHTGGKSSDCDDNSASDFQCSVCYKVFSRKSALIDHMRLHTGEKPFQCKLCTEKFRNKTALLCHRRTMHTDELIKEDKSVSEFQCSVCYKVFGMKTRLRAHMRTHTGEKPFDCELCREKFGSSNGLLYHKRTKHTEELISDDKAVSDFQCSVCYKVFGRKYALRDHMRVHTGEKPFQCELCPEKFGNNTALLSHKRTKHTDELISDNKPVSDFQCSVCNKVIGQKSRLKIHMRIHTGEKPFDCELCPEKFGNSSALLWHRRTRHTDELISDVKPVPDFQCSVCYKVFGKKCVLRDHMRVHTGEKPFQCKFCPRKFRTSTALQCHRRTRHKDEFIRDGKPVPDLQCSVCCKVFSQKYLLKNHMRTHTGEKPFDCELCPEKFASSNGLLCHRRIKHTDELASDDKPDFKCSICFKIFGMKCQLRYHMRLHTGEKPFNCELCPEKFGNTSALLCHRRTKHTDKLINDDKPVPDFQCSVCYKVFGKKYILRNHMLLHTGEKPFQCNLCPEKFRNNNALLCHRRTKHTNEFISDDKPVPDFQCSVCYKVFGQKYLVRKHMREHEKPFQCKLCPENFQCNDSFKIHVQTKHTDQETEKPDYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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