Ctib032848.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- ZFY
- Assembly
- GCA_963669355.1
- Location
- OY770264.1:14104125-14110861[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.073 8.2 8.5 0.3 2 23 299 321 298 321 0.93 2 18 5.1e-06 0.00058 21.6 3.5 1 23 384 406 384 406 0.99 3 18 0.0091 1 11.3 1.7 1 23 412 435 412 435 0.97 4 18 5e-06 0.00056 21.6 4.3 1 23 449 471 449 471 0.99 5 18 0.0073 0.82 11.6 4.5 1 23 477 500 477 500 0.97 6 18 0.012 1.3 11.0 0.1 2 23 515 536 514 536 0.97 7 18 0.00037 0.042 15.7 1.2 1 23 542 565 542 565 0.98 8 18 1.7e-05 0.0019 20.0 1.5 2 23 580 601 579 601 0.97 9 18 0.0055 0.62 12.0 2.3 1 23 607 630 607 630 0.98 10 18 5.1e-05 0.0058 18.4 0.6 1 20 644 663 644 666 0.93 11 18 0.00066 0.074 14.9 1.3 1 23 672 695 672 695 0.97 12 18 9.2e-05 0.01 17.6 1.6 2 23 707 728 706 728 0.97 13 18 0.19 22 7.2 1.8 1 23 734 757 734 757 0.96 14 18 2.1e-05 0.0024 19.6 1.9 1 23 768 790 768 790 0.99 15 18 0.00031 0.035 16.0 2.6 1 23 796 819 796 819 0.97 16 18 2.4e-05 0.0027 19.4 3.7 1 23 830 852 830 852 0.98 17 18 0.00012 0.014 17.2 4.5 1 23 858 881 858 881 0.98 18 18 2.7e-06 0.00031 22.4 2.4 1 23 891 913 891 913 0.99
Sequence Information
- Coding Sequence
- ATGTGCCGAACGTGCTTGAGATCGGGAGAAACGCTGTCCTCTCTATTCGACGAGGAAATCGAACCCGCAAAGCATACTGCTGCTGATCTATTGGGGATGTTTACATCCGTTCAGGTCGACAAAGAAGATGATTTTCCGCATAGCATTTGCGACATCTGCCTTAAAGAAATTCAACAGGcgtatttatttgttttgaaatgtAAAAAATCAGAAATTATTTTACATCAGTTGAGAGAAATCAGAGTTAacttaaaaaaactaaaagaaatacCAAAACAAAATGACATTGTTAGCGAAGTTGCTGGTGAACTTGAAAGCATTCTAAAAGAAGATTTTAAGTTCGAAGATGTCATGAATCTCTGTGATCGCAACATCAGCGATTCCGAAAGTTATGCAAATGAGAGAATAGGATCTGTCGAAGAAGAAAATGCTAATGCACGTGAGAAATTAAGACTGCGGATTGTAGAAGAACAATGTGCACGAGATCTTCAACTGGCCTTTAAAAGAGAGCGTGAGCAAAGCCACCATTTCATGAAAGATGAGACAAACGAGAAAGAATTAGAACGCATAGTATCAAATCTTCAAATTGTAGAAGAAGACTGTGATCCTCAAATAACTTTGAAACAAGAGCCTGATCACAACAGCCCTATTATTAGAAATAATGCAGctcagaacaaattagaactCAACCAAAACTCATCCAAATTTGAAATCTTCGATGAATGTGCTTCGGAATATGAAGTTATGTTCAAAACAGAACCTGATCAGAACGACTTTCTTAAAAAAGATTATGAAAATGAGGAAGAATTAGAATTCAGTGTAACGGATTTACCTGTAACTTTTAAAGCAGAACCCGAGCTGGATATTGGCATAGATTACAATGACGAGCGATTGCAGTGCTCGGATTGTTTAAAACAGTTTCAATCGCTTGATATGTTCCGCGGTCACATAGTATCTGATCATTTAGAAGAAAACAATTGCAAACTTTGCAATGaagAATTTGAATGCAGCCAATTCGAACATTCGGCCAAACATCTTCCAATTAGCGAACCGGAGAATCCATCTGGCTCAAGTGAAGAGTCAATAATGCAAACTGAAAAAGTGCATATGAAAGCAATACACAAAGGCGAATCCTTAGACAAATCTGATTTCCAATGCACGATTTGTTCAAAAGTTTTCGTTCATAGATACCGATTAAAAGATCATATTCGGactcataccggtgaaaaaccgtttgaCTGTAAATTATGCCCGGAAAAATTTGGAAACACTACAACTCTGCTGTACCATAAACGAACTAAGCATACAGATGAATTCAATAGTAATGATAAACCAGTATCAGACTTCCAATGCActgtttgcaacaaagttttcgGTCATAAATTCCTACTAAGATATCATATGCGTactcataccggtgaaaaaccgtttgaCTGTGAATTCTGTCCGGAAAAGTTTAGAAACTGTCAAACACTTTTATaccatagacgaactaagcacacagatgaaTTGAATAGTGATGATAAACCAATACCAGACTTGCAATGTAGTGTTTGCTACAAAGTATTCGGTGTGGGGTGGCGCTTAAGAAAACATATGCTtgtgcataccggtgaaaaaccgtttcagTGTGAATTATGTCCGGCAAAGTTTGGACAAAGTAACACGCTGCAATACCATAGACGAACCAAGCACACAGATCAATTGATTAGTAATGATAAACTAGTAAAAGACTTGCAATGCAGTGTTTGCTCCAAAATTTTCGGTCATAAATACCTGTTAAGAGATCATATGCGTGTCCATACtggtgaaaaaccgtttcaatgtAATTTATGCCCCGAAAAGTTTAGAATGAGCCAAAATCTGCTATtccatagacgaactaagcacacagatgaaTTGATTAGTGATGATAAACCAGTACCAGACTTTCAATGCAGTGTATGCTACAAAGTTTTCGGTCGCAAATCGCTATTAAAAATGCATATGCCTGTCCATATCAGTGAACAAATGTTTCAATGTCAAGCATGCCCGGAAAAGTTTAGAAAGAGTGTCGAGCTGCTACGTCATAGGAAAAGTAAGCACACAGATGAACTGATTAGTGATGTACTAGACCTCCAATGCAATGTTTGCTCCAAAATTTTCGGTATGAAGCACCAATTAAAAAATCATATGCTTGTGCATACCAATGAAAAACCGTTTGACTGTGAATTATGTCCGGAAAAGTTTGGAAGCAGAAGCGCGATGCTATGtcatagacgaactaagcacacagatgCAATGACTTGCGATATACCAGATttccaatgcagtgtttgctcCAAAATTTTCGGTTATAAATACCGATTAAAAAATCATATGCGtgtgcataccggtgaaaaaccctTTCATTGTAAACTATGCCCGGAAAAGTTTGGAAGGAACGAAAGTTTGCAAAGCCATGAACGAACAAAGCACACAGATGAACAGATTAATGAGGCAGCAGACTTCAAGTGCAGTGTCTGCTACAAAGTTTTTGGTTACAATTACCAATTAAGAAGGCATATGCAtgtgcataccggtgaaaaaccgtttcagTGTAAATTATGCCCGAAAAAATTTGCAAGAAGCCATAGACTTAAAACTCATGTGCAAACAAAACATACAGATCAAGTGATTGAAAAGCCGGATTATAAGTGCAAGGTTTGCtcgaaagtttttgtttttaaacagAGTCTAAGCCGTCATATGCGTTTGCATACGCGTGTGATTGGTTAG
- Protein Sequence
- MCRTCLRSGETLSSLFDEEIEPAKHTAADLLGMFTSVQVDKEDDFPHSICDICLKEIQQAYLFVLKCKKSEIILHQLREIRVNLKKLKEIPKQNDIVSEVAGELESILKEDFKFEDVMNLCDRNISDSESYANERIGSVEEENANAREKLRLRIVEEQCARDLQLAFKREREQSHHFMKDETNEKELERIVSNLQIVEEDCDPQITLKQEPDHNSPIIRNNAAQNKLELNQNSSKFEIFDECASEYEVMFKTEPDQNDFLKKDYENEEELEFSVTDLPVTFKAEPELDIGIDYNDERLQCSDCLKQFQSLDMFRGHIVSDHLEENNCKLCNEEFECSQFEHSAKHLPISEPENPSGSSEESIMQTEKVHMKAIHKGESLDKSDFQCTICSKVFVHRYRLKDHIRTHTGEKPFDCKLCPEKFGNTTTLLYHKRTKHTDEFNSNDKPVSDFQCTVCNKVFGHKFLLRYHMRTHTGEKPFDCEFCPEKFRNCQTLLYHRRTKHTDELNSDDKPIPDLQCSVCYKVFGVGWRLRKHMLVHTGEKPFQCELCPAKFGQSNTLQYHRRTKHTDQLISNDKLVKDLQCSVCSKIFGHKYLLRDHMRVHTGEKPFQCNLCPEKFRMSQNLLFHRRTKHTDELISDDKPVPDFQCSVCYKVFGRKSLLKMHMPVHISEQMFQCQACPEKFRKSVELLRHRKSKHTDELISDVLDLQCNVCSKIFGMKHQLKNHMLVHTNEKPFDCELCPEKFGSRSAMLCHRRTKHTDAMTCDIPDFQCSVCSKIFGYKYRLKNHMRVHTGEKPFHCKLCPEKFGRNESLQSHERTKHTDEQINEAADFKCSVCYKVFGYNYQLRRHMHVHTGEKPFQCKLCPKKFARSHRLKTHVQTKHTDQVIEKPDYKCKVCSKVFVFKQSLSRHMRLHTRVIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -