Ctib032847.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- ZFY
- Assembly
- GCA_963669355.1
- Location
- OY770264.1:14073347-14093877[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.2 22 7.1 0.2 2 23 298 320 297 320 0.93 2 27 6.3e-05 0.0071 18.1 0.4 2 22 381 401 380 401 0.96 3 27 6.1e-06 0.00068 21.3 0.9 1 23 442 464 442 464 0.98 4 27 0.9 1e+02 5.1 0.3 1 16 470 485 470 486 0.88 5 27 3.9e-05 0.0044 18.8 1.8 2 23 508 529 507 529 0.97 6 27 0.034 3.8 9.5 2.6 1 23 535 558 535 558 0.96 7 27 7.7e-05 0.0087 17.9 3.9 1 23 572 594 572 594 0.99 8 27 0.0044 0.49 12.3 0.6 3 23 602 623 600 623 0.96 9 27 6.6e-05 0.0074 18.1 1.3 2 23 638 659 637 659 0.97 10 27 0.19 22 7.2 3.0 1 23 665 688 665 688 0.97 11 27 3e-05 0.0034 19.1 1.3 1 23 699 721 699 721 0.99 12 27 0.0019 0.21 13.5 0.9 1 23 727 750 727 750 0.98 13 27 0.00055 0.061 15.2 1.4 2 23 765 786 764 786 0.97 14 27 0.034 3.8 9.5 2.6 1 23 792 815 792 815 0.96 15 27 0.00011 0.013 17.3 3.8 1 23 829 851 829 851 0.99 16 27 0.0044 0.49 12.3 0.6 3 23 859 880 857 880 0.96 17 27 9.7e-05 0.011 17.5 1.3 2 23 895 916 894 916 0.97 18 27 9.1 1e+03 1.9 0.2 1 11 922 932 922 934 0.92 19 27 7.9 8.9e+02 2.1 0.2 2 23 1099 1121 1098 1121 0.92 20 27 0.00012 0.013 17.3 3.9 1 23 1180 1202 1180 1202 0.99 21 27 0.044 4.9 9.2 1.7 1 23 1208 1231 1208 1231 0.96 22 27 0.003 0.33 12.9 4.7 1 23 1242 1264 1242 1264 0.98 23 27 0.00084 0.095 14.6 3.1 1 23 1270 1293 1270 1293 0.98 24 27 2.7e-06 0.00031 22.4 1.2 1 23 1304 1326 1304 1326 0.99 25 27 0.24 27 6.9 2.8 1 23 1332 1355 1332 1355 0.97 26 27 0.00069 0.078 14.9 0.7 1 23 1369 1391 1369 1391 0.99 27 27 0.0015 0.17 13.8 0.3 1 23 1397 1420 1397 1420 0.95
Sequence Information
- Coding Sequence
- ATGATGTCCTCTCTATTCGTCGAGAAAATCGAACCCGCAAAGCACACTGCTGCTGATTTGTTGGCGATGTTTACATCAGTTCAGATCGACAAAGAAGATGATTTTCCGCACAACATTTGCGACATCTGCCTTAAAGAAATTCAACAAgcgtatttatttgatttgaaatgtaaAAAATCAGAAATTATTTTACATCAGTTGAGAGAAATCAGAGTTAACTTAAAGAAACTAAACGAAATACCAAAACAAAATGACATTGTTAGCAAAGTTGCTGATGAGCTTGAAAGCATTCTAAAAGAAGATTTTAAGTTTGAAGATGTCATGAGTCTTTGTGGTGGCAACATCAGCGATTCCGAAAGTAATGCAAGTGAGAGAATTCGATCTGCCGAAGAAGAAAATGCTAATACAAGTGAGAAATTAACACTTAAAATTGTGGAAGATGAATGTACTCGAGATTTTCAGCTGGCTTTTAAAAGAGAGCCTGATGATTGCACCCATTTGACGAAAGATTTAGAAGGCATCCAAATagtgtacaattttcaaattgtagaagAAGACTATGATCCTCAGATAACTTTGAAACAAGAGCTTGATTATAACAGAcctattaataaaaataatgtagatCAGAACGAATTACAGCTCACCCAAAACTcatccaattttaaaatattcgatGAATGCGCTACGGAATGTCAAGTCATTTTCAATACAGAGCTTGATCAGAACGACGTTGTTATAAAAGGTAATGATAATGAGGAGGGATTAGAATACAGCGAAATGtcgtcaaattttcaagatctcGAAGAAGAATGTGTCCCGGATATTCGTGTGACTTATAAATCTGAACCCGAGCTGGATATTGGCATAGATTGCTATGACGAGAAATTGGAGTGTTTGGATTGTTTAAAACAGTTTCAATCGCTTGATATGTTCCGCGATCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAAACTTTGCAATGaagAATTTGAATGCAGTCAATTCGAACATTCGGCCAAACATCTTCCATTCAGCAAACTGGAGAGTCCATCTGGTTCAAGTGAAAAGTCTAGACAAAAAGTATATATGACATCAATACAAAATGACGAATTCGTTGGCAAACCTGACCTCCAGTGTAAGATTTGTTCAAAAGTTTTCATAAATAGATACCGATTAGTAAATCATATGCGCACTTATACCGATGAAAACCCGTTTGACTGGGAATTATTGCCGGAAAAGTCTGGAAACAGTACCAGTAGTGCACGAACTAATCCCACAGATGAATtgattaataatgaaaaactagaATCAGACTTTCAATGCAGTGTTTGCAGCAAAGTTTACGGTCAGAAATACCAATTAAAAAATCACATGCTTGTGCATACCGATGAAAAACCTTTTGAATGTGAATTCTGCCCGGAAAAATTTCAACAGAGCCACGCACTATTAGGCTATAGACGATCTAGGCACAGAGATGAATTGATTAATGATGATAAGCCAGTACCAGACTTGCAATGTAGTGTTTGCTACAAATTTTTCGGTGAGAAATACCTATTAAGAAAACATATGCGTactcataccggtgaaaaaccatttgactgtgaattatgtccggtaaaatttaaaactagtAGCGCGCTGCTATGCCATAAACGAACTAAACACACAGACGAATTGATCAGTGATGATAAGCCAGAACCAGAATTCCAATGCaatgtttgctacaaagttttcggTATGAAATGCCTATTAAAAAATCATATGCGTACTCATACCGGTGAGAAACCAATTGACTGCCAATCATGCCCGGAAAAGTTTATAAACATTAAAGCGCTGCGCAaccatagacgaactaagcacacagatgaaTTCATTAGTGATGATAAACTAGTAAAAGACTTGCAATGCaatatttgctcgaaaatatTCGGTCATAAATACGTGTTAAGAGATCATATGCGTGttcataccggtgaaaaaccgtttcaatgtGAATTATGCCCGGCAAAGTTTAGAGTCAGTAAATCACTGCTATGCCATAGACGATCCAAGCACACCGATAAACTAATAAGTGATCTACCAGTTTTCCAATGCAATGTTTGCTCCAGAATTTTCGGTCAGAAATACCGATTAAAAGATCATATGCGTGTACATACtggtgaaaaaccgtttcaatgtGAATTATGCCCGGAAAAATTTCAAAGAAGCCAGCCGTTGCTACtccatagacgaactaagcacagAGATGAATTGATTAGTGATGATAAGCCAGTACCAGACTTGCAATGTAGTGTTTGCTATAAATTGTTCGGTGAGAAATTTCTATTAAGAAAACATATGCGTactcataccggtgaaaaaccatttgactgtgaattatgtccggtaaaatttaaaactagtAGCGCGCTGCTATGCCATAAACGAACTAAACACACCGATGAATTGATCAGTGATGATAAGCCAGTACCAGAAttccaatgcagtgtttgctacaaagttttcggTATGAAATGCCTATTAAAAAATCATATGCGTACTCATACCGGTGAGAAACCAATTGACTGCCAGTCATGCCCGGAAAAGTTTATAAACATTAAAGCGCTGCGAAaccatagacgaactaagcacacagatgaaTTCATTAGTGATGATAAACTAGTAAAAGACTTGCAATGCAGTATTTGCTCCAAAATATTCGGTCATAAATACGTGTTAAGAGATCATATGCGTGttcataccggtgaaaaaccgtttcagTGTGAATTATGCCCGGCAAAGTTTAGAGTCGACAAAGAAGATGATTTTCCGCATAACATTTGCGGCATCTGCCTTAAAGAAATTCAACAAgcgtatttatttgatttgaaatgtaaAAAATCAGAAATTATTTTACATCAATTGAGAGAAATCAGAGTTAACTTAAAGAAACTAAACAAAATACCAAAACAAAATGACATTGTTAGCGAAGTTGCTGGTGAACTTGAAAGTTTTTTAAAAGAAGATTTTAAGGTAGAAGATGTTACGAGTCCCTGTTATCGTAAAATCAGCGATTCCGAAAATAATGTAAATGAATGCGCTCCAGAATATCAAGCTATTTTTAACACAGAGCGTGATCAGAAAAGCCTTATTATAAAATGTAATGAAAATGAGGAAGATTTCGAATTGATCGAAATATCGTCAAATTTTCAATCTGTCGAAGAAGATTGTGTCCCGGATTTTCACGTGGCTTTTAAATCAGAACCCACGCTGGATATTGGCATAGATTGCTATGACGAGCAGTTGAAGTGCTCGGCTTGTTTAAAACAGTTTCAATCGGTTGATATGTTCCGCGGTCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAAACTTTGCAATGaagAATTTGAATGCAGTCAATTCGAACATTCGGCCAAACATCTTCCAATTAGCGAACAGGAGAATCCATCTACCTCAATTGAAGAGTCAATAAGACAAACTGAAAAAGTGCATATGAAAGCAATACACAAAGGCAAACCTCATTTCCAATGTAAGATttgttcaaaagtttttgttcaTAGATACCGATTAAAACCTCATATGCGTactcataccggtgaaaaaccgtttgaCTGTGAATTATGTCCGGAAAAGTTTGGAAGCAGAAGCGCGCTGCTAtgccatagacgaactaagcacacagatgaaCTGATTAGTGAGGTAGCAGACTTTCAATGCAGTGTCTGCTGCaaagtttttggtcacaatTACCTATTAAGAAGGCATATGCTTttgcataccggtgaaaaaccgtttcaatgtaaatcatGCCCGGAAAAGTTTAGAAAGAGCGAGACTCTGCTATaccatagacgaactaagcacatAGATGAACTGATTAGTGAGGTACCAGATTTCCAATGCAGCGTTTGCTACAAAGCTTTCGGCCAGAAATACCTATTAAGAAACCATATGCGTGTGCATACCGGCgaaaaaccgtttcaatgtGAATTATGTCCGGAAAAGTTTAGAATCAGTAAGGCGCTGTTATGCCATAaacgaactaagcacacagataAATTCATTAGTGACGATAAACCAGTACCAGACttccaatgcagtgtttgctacAAAGCTTTTGGTATGAAAGGCATATTAAGAAATCATATGCGTACTCATACCGGCGAAAAACCGTTCGACTGTGAATTATGTCAGGAAAAGTTTGCGAACAGTACCGCACTGCTATGGCACAGGCGAGCTAAGCACACAGATGAATGA
- Protein Sequence
- MMSSLFVEKIEPAKHTAADLLAMFTSVQIDKEDDFPHNICDICLKEIQQAYLFDLKCKKSEIILHQLREIRVNLKKLNEIPKQNDIVSKVADELESILKEDFKFEDVMSLCGGNISDSESNASERIRSAEEENANTSEKLTLKIVEDECTRDFQLAFKREPDDCTHLTKDLEGIQIVYNFQIVEEDYDPQITLKQELDYNRPINKNNVDQNELQLTQNSSNFKIFDECATECQVIFNTELDQNDVVIKGNDNEEGLEYSEMSSNFQDLEEECVPDIRVTYKSEPELDIGIDCYDEKLECLDCLKQFQSLDMFRDHIVSDHLEENICKLCNEEFECSQFEHSAKHLPFSKLESPSGSSEKSRQKVYMTSIQNDEFVGKPDLQCKICSKVFINRYRLVNHMRTYTDENPFDWELLPEKSGNSTSSARTNPTDELINNEKLESDFQCSVCSKVYGQKYQLKNHMLVHTDEKPFECEFCPEKFQQSHALLGYRRSRHRDELINDDKPVPDLQCSVCYKFFGEKYLLRKHMRTHTGEKPFDCELCPVKFKTSSALLCHKRTKHTDELISDDKPEPEFQCNVCYKVFGMKCLLKNHMRTHTGEKPIDCQSCPEKFINIKALRNHRRTKHTDEFISDDKLVKDLQCNICSKIFGHKYVLRDHMRVHTGEKPFQCELCPAKFRVSKSLLCHRRSKHTDKLISDLPVFQCNVCSRIFGQKYRLKDHMRVHTGEKPFQCELCPEKFQRSQPLLLHRRTKHRDELISDDKPVPDLQCSVCYKLFGEKFLLRKHMRTHTGEKPFDCELCPVKFKTSSALLCHKRTKHTDELISDDKPVPEFQCSVCYKVFGMKCLLKNHMRTHTGEKPIDCQSCPEKFINIKALRNHRRTKHTDEFISDDKLVKDLQCSICSKIFGHKYVLRDHMRVHTGEKPFQCELCPAKFRVDKEDDFPHNICGICLKEIQQAYLFDLKCKKSEIILHQLREIRVNLKKLNKIPKQNDIVSEVAGELESFLKEDFKVEDVTSPCYRKISDSENNVNECAPEYQAIFNTERDQKSLIIKCNENEEDFELIEISSNFQSVEEDCVPDFHVAFKSEPTLDIGIDCYDEQLKCSACLKQFQSVDMFRGHIVSDHLEENICKLCNEEFECSQFEHSAKHLPISEQENPSTSIEESIRQTEKVHMKAIHKGKPHFQCKICSKVFVHRYRLKPHMRTHTGEKPFDCELCPEKFGSRSALLCHRRTKHTDELISEVADFQCSVCCKVFGHNYLLRRHMLLHTGEKPFQCKSCPEKFRKSETLLYHRRTKHIDELISEVPDFQCSVCYKAFGQKYLLRNHMRVHTGEKPFQCELCPEKFRISKALLCHKRTKHTDKFISDDKPVPDFQCSVCYKAFGMKGILRNHMRTHTGEKPFDCELCQEKFANSTALLWHRRAKHTDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -