Ctib013594.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
Zbtb41
Assembly
GCA_963669355.1
Location
OY770262.1:272231674-272247865[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 1.3 1.4e+02 4.6 0.4 2 23 306 328 305 328 0.93
2 22 2.3e-06 0.00026 22.7 1.1 1 23 391 413 391 413 0.99
3 22 0.0043 0.49 12.4 2.9 1 23 419 442 419 442 0.97
4 22 0.00027 0.031 16.1 5.0 2 23 457 478 456 478 0.97
5 22 0.033 3.8 9.6 2.7 1 23 484 507 484 507 0.96
6 22 0.0002 0.022 16.6 2.4 1 23 521 543 521 543 0.99
7 22 0.028 3.2 9.8 1.3 1 23 549 572 549 572 0.97
8 22 6.8e-06 0.00076 21.2 3.8 1 23 586 608 586 608 0.99
9 22 0.24 27 6.9 5.3 1 23 614 637 614 637 0.96
10 22 5.7e-05 0.0064 18.3 3.2 1 23 651 673 651 673 0.99
11 22 0.015 1.6 10.7 3.2 1 23 679 702 679 702 0.97
12 22 3.4e-06 0.00039 22.1 1.0 1 23 716 738 716 738 0.99
13 22 0.00031 0.034 16.0 1.2 2 23 745 767 744 767 0.97
14 22 5.1e-05 0.0058 18.4 4.0 1 23 781 803 781 803 0.99
15 22 0.00025 0.029 16.2 0.5 3 23 811 832 809 832 0.97
16 22 0.00019 0.022 16.6 3.3 1 23 846 868 846 868 0.99
17 22 0.039 4.4 9.3 1.4 1 23 874 897 874 897 0.96
18 22 6.8e-06 0.00077 21.2 3.6 1 23 911 933 911 933 0.99
19 22 4.7e-05 0.0053 18.5 0.4 1 23 939 962 939 962 0.97
20 22 0.00044 0.049 15.5 3.5 1 23 976 998 976 998 0.99
21 22 0.021 2.3 10.2 3.6 1 23 1004 1027 1004 1027 0.97
22 22 2.2e-06 0.00024 22.7 1.5 1 23 1041 1063 1041 1063 0.99

Sequence Information

Coding Sequence
ATGATGTCCTCTATATTCGACGAGGAAATCGAATCCGCCATGCACACTGCTGCAGATCTGCTGGCGATGTTTACATCCGTTCAGGTCGACAAAGCAGATGATTTTCCGCATAAGATTTGTGACACCTGCCTTAAAGAAATTCAACAAgcgtatttatttgatttgaaatgtaGAAAATCAGAAATTATTTTACATCAATTGAGAGAAATCCGAGTTACCTTAAAAAAACTAAACGAAAtaccaaaacaaaagaaaatttttagcgAAGGTACTGGTGAActtgaaagtattataaaagAAGACTTCAAGCTAGAAGATATTATGAATCTCTGTGATCGCATTATCAGCGATTCCGAAAGTAATACAAGTGAGAGAATTGGATCTGTCGAAGAAGAAAATGCTAATGCTAgtgagaaattaaattttcaaattgtggAAGAAGAATGTACTCGAGATCTTCAACTGGCCTTTAAAAGTGAGCCTGATCATAGCAACCATTTTATGAAAGATGATACAAATGAGAAAGAATTAGAACGCATAAAAATGgtgtcaaattttcaaattgaaagagaAGACTGTGATCCTGAGATTCAAATAACTTTGAAACAAGAGCCTGATCACAATTGTCCTATTATTAGAAATAATGAATGTCAAAACGAATTAGAACTAAACCAAAACTCATCAAATTTTGTAATCTTGAATGAAGGCGCTCAGGAATATCAAGTTAGTTTCAACACAGGGCATGATCAGAACAACCTTATTATAAAAGATAATGAAAGTGAGGGAGAACTAGAATTCAGTGAAATAtcgtcaaattttcaaattgtcgAAGAAGACGGTTTTCCGCATTTTCGTGTAAATTTTAAAACAGAGCCCGAGCTGGATATTGGCATAGATTGCAATGACGAGGAATTGAAGTGCTCGACTTGTTTAAAACTATTTCAATCGCTTGATATGTTCCGCGGTCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAGACTTTGCAATGaagAATTTGAATGCAGTCAATTCGAACATTCGGCCAAACATCTCCCATTTAGCGAACCGGAAAAACCATCTGGTTCAAGTGAAAAGTCAATAACACAAACTGAAAAAGTGCATATGAGAGCAATACACAAAGACGAACTCTTTGGCAAACCTGATTTCCAATGTAAGATTTGTTCAAAAGTTTTCGTTCGTAGATACCGTTTAGTAGATCACATGCGTAttcataccggtgaaaaaccgtttgaCTGTGAATTATGTCCAGAAATGTTTAGAAACAGAAGCTCGCTGCTAtgccatagacgaactaagcacacagatgaaCTCATTAGTGACAATAAACCAGAACGAGACTTgcaatgcagtgtttgctacaaagttttcgaTCATAAATACCTATTAAGAGATCATATGTGTAaacataccggtgaaaaaccgtttgaCTGTGAATTATGTCCGGAAAAGTTCAGAAAACGTGACGCGCTGCTAtgccatagacgaactaagcacacagatgaaTTTATTAGTGATGATAAACCAGTATCAGAATACCAATGCAGTGTTTGCAGCAAAGTTTTCGGTATGAAATGCCGATTAAGAGTTCATATGCGAAtacataccggtgaaaaaccgtatGACTGTGAATTATGTCCGGAAAAGTTTGGAAACCGTGACGCGCTGCTAtgccatagacgaactaagcacGCAGATGAATTTATTAGTGATGATAAACCAGTACCAGATTTCCAATGCAatatttgctacaaagttttcggTCGGAAATACCTATTAAGAGATCATATGTGTAcacataccggtgaaaaaccgtttgaCTGTGAATTGTGTCCGGAAAAGTTTAGAAAACGTCACGCGCTCCTATGCCAcagacgaactaagcacacagatgaGTTTATTAGTGATGACAAACCAGTACCAGACTTTCAATGCAGTGTTTGCAGCAAAGTTTTCGCCATGAAATGCCGATTAAGAGTTCATATGCGTACACATAGTGGTGAAAAACCGTTTGACTGTAAATTATGTCCGGAAAAGTTTAGAAAACGTGGCTCGCTGCTATGCCATAtacgaactaagcacacagatgaaTTTATTAGTGATGATACTCCAGTACCAGACTTCCAATGTAGTATTTGCAGCAAAGTTTTCGGCATGAAATACCTTTTAAGAGATCATATGCGTatgcataccggtgaaaaaccgatTCAATGTAAATTATGCCCGGAAAAGTTTAGAAAGAATATCGATCTGTTATcccatagacgaactaagcacacagatgaatttattagtgatgataaaccggtaccagacttccaatgcagtatttgctacaaagttttcggTCTGAAATGCCTATTAAGAAAACATATGCGTactcataccggtgaaaaaccgtttggCTGTGAATTATGTCCGAAAACGTTTATAGACAGTAGAGCGCTGCTATACCATAGACGGACTAAGCACACAGATCAATTTATTAGTGATGATAAACCAGTACCAGACTTCCAGTGCAGTGTTTGCAGCAAAGTTTTTGGCATGAAATGCCGATTAAGAGTTCATATGCGTAcacataccggtgaaaaaccgtttgaCTGTGAATTATGTCCGGAAAAGTTTGGAAACCGTGACGCGCTGCTAtgccatagacgaactaagcacacatATGAATTGATTAGTGATGATAAACCAATACCAGACTACCAATGCAgtatttgctacaaagttttcggTCGGAAATACCTATTAAGAGATCATATGTGTactcataccggtgaaaaaccgtttgaCTGTGAATTATGTCCGGAGAAGTTTGCAAGCAGTTACGGGTTGCTACGCCACAGACGAACTAATCACACCGATGAATTCATTAGTGATAATAAACCAATACCAGACTTCCAATGCAGCATTTGTTACAAAGTTTTCGGTCTAAAATGTCGATTAAGAGTTCATATGCGTACACATACCGGTGAAAAGCCATTTGACTGTGAATTATGTCCGGAAAAGTTTAGAAAACGTGGCTCGCTGCAAtgccatagacgaactaagcacacaaATGAATTGATTAGTGATACAGCACCAGTACCAGACttccaatgcagtgtttgcaGCAAAGTTTTCGGCATGAAATACCTATTAAGAAATCATATGCGCAcacataccggtgaaaaaccgatTGACCGTGAACTATGTCCGGAAAAGTGA
Protein Sequence
MMSSIFDEEIESAMHTAADLLAMFTSVQVDKADDFPHKICDTCLKEIQQAYLFDLKCRKSEIILHQLREIRVTLKKLNEIPKQKKIFSEGTGELESIIKEDFKLEDIMNLCDRIISDSESNTSERIGSVEEENANASEKLNFQIVEEECTRDLQLAFKSEPDHSNHFMKDDTNEKELERIKMVSNFQIEREDCDPEIQITLKQEPDHNCPIIRNNECQNELELNQNSSNFVILNEGAQEYQVSFNTGHDQNNLIIKDNESEGELEFSEISSNFQIVEEDGFPHFRVNFKTEPELDIGIDCNDEELKCSTCLKLFQSLDMFRGHIVSDHLEENICRLCNEEFECSQFEHSAKHLPFSEPEKPSGSSEKSITQTEKVHMRAIHKDELFGKPDFQCKICSKVFVRRYRLVDHMRIHTGEKPFDCELCPEMFRNRSSLLCHRRTKHTDELISDNKPERDLQCSVCYKVFDHKYLLRDHMCKHTGEKPFDCELCPEKFRKRDALLCHRRTKHTDEFISDDKPVSEYQCSVCSKVFGMKCRLRVHMRIHTGEKPYDCELCPEKFGNRDALLCHRRTKHADEFISDDKPVPDFQCNICYKVFGRKYLLRDHMCTHTGEKPFDCELCPEKFRKRHALLCHRRTKHTDEFISDDKPVPDFQCSVCSKVFAMKCRLRVHMRTHSGEKPFDCKLCPEKFRKRGSLLCHIRTKHTDEFISDDTPVPDFQCSICSKVFGMKYLLRDHMRMHTGEKPIQCKLCPEKFRKNIDLLSHRRTKHTDEFISDDKPVPDFQCSICYKVFGLKCLLRKHMRTHTGEKPFGCELCPKTFIDSRALLYHRRTKHTDQFISDDKPVPDFQCSVCSKVFGMKCRLRVHMRTHTGEKPFDCELCPEKFGNRDALLCHRRTKHTYELISDDKPIPDYQCSICYKVFGRKYLLRDHMCTHTGEKPFDCELCPEKFASSYGLLRHRRTNHTDEFISDNKPIPDFQCSICYKVFGLKCRLRVHMRTHTGEKPFDCELCPEKFRKRGSLQCHRRTKHTNELISDTAPVPDFQCSVCSKVFGMKYLLRNHMRTHTGEKPIDRELCPEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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