Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770262.1:219099781-219104416[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.013 1.5 10.8 0.5 1 23 87 110 87 110 0.96

2 20 0.0069 0.77 11.7 0.2 1 23 116 138 116 138 0.97

3 20 0.0099 1.1 11.2 3.9 2 23 144 165 144 165 0.97

4 20 0.077 8.6 8.4 3.3 1 19 171 189 171 190 0.96

5 20 5.1e-08 5.7e-06 27.9 0.7 2 23 209 230 209 230 0.98

6 20 0.00021 0.023 16.5 1.1 1 23 236 258 236 258 0.92

7 20 1.8e-06 0.0002 23.0 0.8 1 23 264 287 264 287 0.97

8 20 0.002 0.23 13.4 0.7 1 23 297 320 297 320 0.93

9 20 1.9e-05 0.0022 19.7 0.6 1 23 423 445 423 445 0.98

10 20 8.5e-06 0.00095 20.9 5.3 1 23 451 473 451 473 0.98

11 20 0.054 6.1 8.9 0.4 1 23 484 506 484 506 0.94

12 20 1.7e-05 0.002 19.9 4.4 1 23 512 535 512 535 0.97

13 20 6.1 6.8e+02 2.4 0.0 5 19 575 589 574 591 0.92

14 20 0.00034 0.039 15.8 5.6 1 23 596 618 596 618 0.99

15 20 0.018 2 10.4 0.5 2 23 626 647 625 647 0.96

16 20 0.00018 0.021 16.7 2.4 3 23 655 675 654 675 0.98

17 20 4e-05 0.0046 18.7 1.7 1 23 832 854 832 854 0.97

18 20 0.00012 0.014 17.2 4.2 1 23 860 882 860 882 0.98

19 20 4.1e-05 0.0046 18.7 0.6 1 23 889 911 889 911 0.97

20 20 8.7e-06 0.00097 20.8 1.4 1 23 917 939 917 939 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.013	1.5	10.8	0.5	1	23	87	110	87	110	0.96
2	20	0.0069	0.77	11.7	0.2	1	23	116	138	116	138	0.97
3	20	0.0099	1.1	11.2	3.9	2	23	144	165	144	165	0.97
4	20	0.077	8.6	8.4	3.3	1	19	171	189	171	190	0.96
5	20	5.1e-08	5.7e-06	27.9	0.7	2	23	209	230	209	230	0.98
6	20	0.00021	0.023	16.5	1.1	1	23	236	258	236	258	0.92
7	20	1.8e-06	0.0002	23.0	0.8	1	23	264	287	264	287	0.97
8	20	0.002	0.23	13.4	0.7	1	23	297	320	297	320	0.93
9	20	1.9e-05	0.0022	19.7	0.6	1	23	423	445	423	445	0.98
10	20	8.5e-06	0.00095	20.9	5.3	1	23	451	473	451	473	0.98
11	20	0.054	6.1	8.9	0.4	1	23	484	506	484	506	0.94
12	20	1.7e-05	0.002	19.9	4.4	1	23	512	535	512	535	0.97
13	20	6.1	6.8e+02	2.4	0.0	5	19	575	589	574	591	0.92
14	20	0.00034	0.039	15.8	5.6	1	23	596	618	596	618	0.99
15	20	0.018	2	10.4	0.5	2	23	626	647	625	647	0.96
16	20	0.00018	0.021	16.7	2.4	3	23	655	675	654	675	0.98
17	20	4e-05	0.0046	18.7	1.7	1	23	832	854	832	854	0.97
18	20	0.00012	0.014	17.2	4.2	1	23	860	882	860	882	0.98
19	20	4.1e-05	0.0046	18.7	0.6	1	23	889	911	889	911	0.97
20	20	8.7e-06	0.00097	20.8	1.4	1	23	917	939	917	939	0.98

Sequence Information

Coding Sequence: ATGGATAAAATCGACTTGAAGCAAGAACTCAACCTCTTACCCACATTCGATTCGAATCCAATGTCGAACGACAACATAACGCCCTTAAAAGACGAAAGTTTTCCGTTGGAAATTCAGGATGGACGGAAATTCAGCCTGATTGATAACAGAGAGCTGCTCGACTTTGTCGAGGAGAATGCACCGCCAACCCCGAAACGAAGAAAACCCCGAAAACGGGCACCGACAAAATTGGACTTGGCAACGGAAAAGTTAAATTCCTACGTTTGCGAGCTGTGCGATGAGAACTTCCATCTGCCGAATCTGTTGCGGCTGCACAAGCGAGCGCTGCATGTTCTCACGAAACCGTATCAGTGCGGAAAGTGCCCGCAGCAATTCAACGTTGAACGGAATTTCGAGATTCACGCGGCCAGTCACGTTGCGATGCCGGCAGTTTGTTTCGTTTGTGGAAAGTGTTTTAGGCGGACAACTGGCTATCACGGGCACTTGCTAACACACATGGTAGCCGATAATTTCTGTTGCAAGAAATGCGGCGAGGAGTTCGAATACGAGGAGTATTTTCGCAGACACTCGGTCGAGTGTCGGGAAAATCGCAACGATATGGAGGTGGAGGAAGTCGCGGTTAGGAAGTGTGATATTTGCGATAAAAGATTTACTAGACCCAGCAATCTGGCCCGGCATCAGGCAACTCATTCGCAGAGTAAACAGTTTCAGTGCACCGTTTGCGAAATGCGTTTCTCTCAGAAATCTTCGCTGGACCGACACAACGACTTACATCTAGGCGTAAAAGATTTCAAGTGTCCGAAATGTTCGATGAATTTCTCTCAAAGCGGCAACCTTCGCACCCACATGGCACGCGTCCATCCAAAAAATCCCGATCTCACAAATAAGTTTCCATGTCCCGACTGCAGCTGCATCTTTAGCAAACTGAACGCACTCAATCGGCACTCAGCAAAGGTGCATGCCATCGCCAACAAACAATCGCGGATCGACAGTGATGAGCACTACTCGATCGATAATGTTATGGCGCAATTGAAACATTTGCAAAATGATTTCTATCCCCTAGCTGATAGTTCTACAGAAAATTGCTCTCTATTTCCCAACAAATGTGTGGAAATTTCGATCATTCCGGAGACCACAGCGGTCCCTGTAATTGAAGACGAATCGAGTTCTGTAAATCGCTTAGTTAAAATTGTCGAGACTCTCAATCCGCAAGAAGAAAAATCCGAAATAGTTGTAAATCAGTTGGAAAATGGATCGATTAAACTTTATCAATGCGAAGCTTGTTCGAAAAGTTTTCAACGTCCTTCCGATCTTTTgagACACAATCGCGTCCATACAAAAGAAAAACCGTACGATTGCGGAATTTGCGGCCGTTGTTTTTCAGTGAAACACAATCTTCACGTTCATTTACGAACGCATGGAAAGGATGCCAATCGCGTCACAAATTGCTACGAATGTCCCGATTGTTTCAAGCTGTTCAGTTCAATGCGGCGACTTGATATGCATGCGGAGAGTCACGGCGATCGAAAATTATTCCCGTGTAAAATTTGCGGTAAATCTTTTCGTTTCACGAGAAATTTACGAATTCATCGATGCACTACTCATCGGCCGAAAAATAAGCACGAATTGGAGCTGCGACGATCGATGAAAGGTCCAATAGAACTCCGAGCCGCAGTCAACGATCCGGGGGAGGTGCCAACAATTAAACGCTATCAATACTCGATatgtgatttgaaatttaaaaaacgatTATATTTGGCGCAGCACGAGGCGGGGACAAAACGATTTCAATGTCAAACATGTAGAAAaACCTTTATGTCACAGCGTTCGTTGAATACGCATCATAGGATTCATTTGGATCACAAAAAAACGAAACAATGTAACGAATGCGATGCGCAGTTTTGGTCGAATACCGAATTGAAACGGCACCGAGTTGTGCATAGTTCGAAAAGGCCGATTCTTTGTCCATATTGCGGCAAATCGTTTAAAACAAAAGCATCGTGTCGCGTTCATATTTTCACGCATGCCAAGGATTTGATGAAGGAGAAAGATGCTGGTGTGGAAGAATCAGATCGAGGTGAATGTGTTACGGCAGTGGCCACAAATGATTCGAATCAGGATGAAAATGTTTTCTATGTGAGCATTGAATTGCCAGGATTGCAAGATCGTCAGGGTGTTCAAACCGGACCATTACCAGCTCCACCTCAGCTTCTCGCATGGTCGCAAACTCAAGAAACTGTTCAAGCCGAAACGCTGCCACATACACCTCGATTAGATCAGCAAATTATTCAAAGCACTCCATCACCACCACCACCCCCAAACAATCCAAGCTTCATCGAAATGCAAGACCTAATCAAAAACAATAAATCCGCTCGGCGTTTATCAAAAATGATCACAGTTCATTCGGTCGAAAAGGTTTCAATTGATCTCGATTCGCTGGTCTCTGTTTCCGAAACAGACGTCGGTTCGACGGAACGCACATCAGCACGGGAACATGTTTGCGAAATTTGCCGGAAATCATTTCGTAAACCAATCGATTATCGTCGACATCAACTGATTCACACGAAAGAGAAACCATTCGAATGTGATATTTGCCACAAGCCGTTTCGCTTGAAGGGTACACTGGATCATCATCGACGGACTCACGGCGAGAAGCGAGAACTTTTCGATTGTCAGGTTTGCGGCAAGAAATACACTTCACGTAACGTGCTAAAAGTTCATTTACGCATTCATACCAATGAAAGGCCATACAATTGTCCGTATTGCCCGAAAACTTTTCGAACATCGGGACATCGGGCTATACACGTTAGAATGCATTTGAAGGTGAAAGAAACGGAGCAAAAGAGAAAGCAGAAGTGA
Protein Sequence: MDKIDLKQELNLLPTFDSNPMSNDNITPLKDESFPLEIQDGRKFSLIDNRELLDFVEENAPPTPKRRKPRKRAPTKLDLATEKLNSYVCELCDENFHLPNLLRLHKRALHVLTKPYQCGKCPQQFNVERNFEIHAASHVAMPAVCFVCGKCFRRTTGYHGHLLTHMVADNFCCKKCGEEFEYEEYFRRHSVECRENRNDMEVEEVAVRKCDICDKRFTRPSNLARHQATHSQSKQFQCTVCEMRFSQKSSLDRHNDLHLGVKDFKCPKCSMNFSQSGNLRTHMARVHPKNPDLTNKFPCPDCSCIFSKLNALNRHSAKVHAIANKQSRIDSDEHYSIDNVMAQLKHLQNDFYPLADSSTENCSLFPNKCVEISIIPETTAVPVIEDESSSVNRLVKIVETLNPQEEKSEIVVNQLENGSIKLYQCEACSKSFQRPSDLLRHNRVHTKEKPYDCGICGRCFSVKHNLHVHLRTHGKDANRVTNCYECPDCFKLFSSMRRLDMHAESHGDRKLFPCKICGKSFRFTRNLRIHRCTTHRPKNKHELELRRSMKGPIELRAAVNDPGEVPTIKRYQYSICDLKFKKRLYLAQHEAGTKRFQCQTCRKTFMSQRSLNTHHRIHLDHKKTKQCNECDAQFWSNTELKRHRVVHSSKRPILCPYCGKSFKTKASCRVHIFTHAKDLMKEKDAGVEESDRGECVTAVATNDSNQDENVFYVSIELPGLQDRQGVQTGPLPAPPQLLAWSQTQETVQAETLPHTPRLDQQIIQSTPSPPPPPNNPSFIEMQDLIKNNKSARRLSKMITVHSVEKVSIDLDSLVSVSETDVGSTERTSAREHVCEICRKSFRKPIDYRRHQLIHTKEKPFECDICHKPFRLKGTLDHHRRTHGEKRELFDCQVCGKKYTSRNVLKVHLRIHTNERPYNCPYCPKTFRTSGHRAIHVRMHLKVKETEQKRKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00324626;
90% Identity: iTF_00324626;
80% Identity: -