Ctib032802.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
ZFY
Assembly
GCA_963669355.1
Location
OY770264.1:13529153-13532529[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00023 0.026 16.4 4.7 1 23 313 335 313 335 0.99
2 24 0.032 3.6 9.6 4.0 1 23 375 397 375 397 0.97
3 24 0.024 2.7 10.0 2.3 1 23 403 426 403 426 0.98
4 24 0.0042 0.47 12.4 2.8 1 23 432 455 432 455 0.97
5 24 0.00094 0.11 14.4 2.5 2 23 470 491 469 491 0.97
6 24 0.00079 0.088 14.7 4.4 1 23 497 520 497 520 0.97
7 24 4.9e-08 5.5e-06 27.9 2.8 1 23 534 556 534 556 0.99
8 24 0.039 4.4 9.3 3.4 1 23 562 585 562 585 0.97
9 24 0.00043 0.048 15.5 0.8 1 23 599 621 599 621 0.98
10 24 4.7e-05 0.0053 18.5 1.3 1 23 627 650 627 650 0.96
11 24 0.002 0.22 13.4 2.6 1 23 656 679 656 679 0.98
12 24 4.9e-08 5.5e-06 27.9 2.8 1 23 693 715 693 715 0.99
13 24 0.039 4.4 9.3 3.4 1 23 721 744 721 744 0.97
14 24 0.00043 0.048 15.5 0.8 1 23 758 780 758 780 0.98
15 24 4.7e-05 0.0053 18.5 1.3 1 23 786 809 786 809 0.96
16 24 0.002 0.22 13.4 2.6 1 23 815 838 815 838 0.98
17 24 4.9e-08 5.5e-06 27.9 2.8 1 23 852 874 852 874 0.99
18 24 0.039 4.4 9.3 3.4 1 23 880 903 880 903 0.97
19 24 0.00017 0.019 16.8 1.7 1 23 917 939 917 939 0.98
20 24 2.3e-05 0.0025 19.5 1.4 1 23 945 968 945 968 0.98
21 24 0.00073 0.083 14.8 5.4 1 23 974 996 974 996 0.97
22 24 0.016 1.8 10.6 3.5 1 23 1002 1025 1002 1025 0.97
23 24 3.1e-05 0.0035 19.1 1.2 1 23 1039 1061 1039 1061 0.99
24 24 0.22 25 7.0 2.9 3 23 1069 1090 1067 1090 0.96

Sequence Information

Coding Sequence
ATGGTTAATAGTCAGGATATGAACATAATTTTTAAACCATATCTTACgattgattttaatttgaaatcctTTCCTTTCTTTACACAGGTCGACAAAGAAGATGATTTTCCGCACAACATTTGTGGCAACTGCCTTAAAGAAATTCAACAAgcgtatttatttgatttgaaatgtaaAAAATCAGAAATTATTCTACATCAACTGAGAGAAATCAGAGTTAAATTAAAGAAACTAAAAGAAATACCAAAACAAAATGACATTGTTAGCGAAGTTGCTGGTGAACTTGAAAGTATTCCAAAAGAAGATGTCATGAATCTCTGTGATCGCAACATCGGCGTTTCCGAAAGTTCAGCAATTGAAAGAATTAAACCTTTAGTATCTCAAGTAACTTTGAAAAAGAAACCTGATCATACCAGCcgtattataaaaaataatccCGGTCAGAACGAATTAGAACTCAACCAAAACTCACCCAATTTTGAAATCTTCGGTGAATGCGATGCGGAATATCAAGTTCTTTTAAAAACAGAGCCTGATCAGAACAACCTTATTATAAAAGACAAAGAAAGCGAGGACGAATTGCAATTCAGCGTAACGGATTTTCCTGTGACTTTTAAATCTGAACCTGAGCTGGATCTTGGCATAGATTGCTATGATGAGCAATTGGAGTGCTCGGCTTGTTTAAAACAGTTTCAATCACTTGATATATTCCGCGGTCACATAGTATCTGATCATTTAGAAGAAAACATTTGCAAACTTTGCAATGaagAATTTGAATGCAGTCAAATCGAACATTCGGGCAAACATCTTCCATTTAGCCATTTGGTTGCAATCGAACCGGACAACCCATCTGACTCAAGTGAAGAGTCAATAAGACAAACTGAAAAAGTACCAATGACAGTAATACACAAAGATGAATTCTTTGACAAACCGTATTTTCAATGTAAGATTTGTTCAAAAGTTTTCAATTATAGATGCCGTTTAGTAAATCATTTGCGTACACACACCGGTGAAAAACCGGTTGACTGTGAATTATGTCCTGAAAAGCCTGGAAACAGTAGCAGTAGTGCACGAACTAACCACACAGATAAATTGATTAATGATGATAAACCAGTACCAGACTTTCAATGCAGTGTCTGCTTCAAAATTTTCGGTCATAAATGGATATTAAGAAGGCATATGCATGagcataccggtgaaaaaccgtttcaatgtaaattatgcCCGGACAAATTTCAACGCTGCGACGCACTTAAAAGCCATGAACAAACAGAACACACAGATCAAAAACCGTTTGATTGTAAATTTTGTCCGGCAAAGTTTAGAAACAGTAAGACGCTGCTATACCATAGACAAACTAAGCACACAGATAAATTGATTATTAAGGATAAACCACTACCAGATTTAAAATGCAgtgtttgcaacaaagttttcgGTAAGATATGTCTATTAAGATATCATATGCGGTCTCACAACGGTGAAAACCCGTTTCACTGTGAATTCTGTCCAGAAAAGTTTAGAAGCAGTACCGCGCTGCGTTACCATAGACGGactaagcacacagatgaaTTGATTAGTAAGGATAAACCACTACCAGATttccaatgcagtgtttgcGACAAAGTTTTCTGTCGGAAaagtttattaaaaattcatatgcGTGTGCACACCGGTGAAAAacagtttcaatgtaaattatgcCCGGAAAAGTTTAGAATCAGTAGCGATCTGCTATGCCATAGACGAAGTAAGCACACAGATGAATTGATTACCGATAATAAACTAATACCAGACTTTCAATGCAGTGTCTGCTTCAAAATTTTCGGTCTTAAATGGTTATTAAGAAGGCATATGTATGTGCATACCGGTGAAACACCGTTTAAATGTAAATTATGCCCGAAAAAATTTCAACGCAGCGACGCACTTAAAAGCCATGAACAATCAGAACACACAAATCAAAAACCGTTTGTTTGTAAATTTTGTCCGGCAAAGTTTAGAAACAGTAGGACGCTGCTATACCATAGACAAACTAAGCACACAGATAAATTGATTAGTAAGGATAAACCACTATCAGATttccaatgcagtgtttgcGACAAAGTTTTCTGTCGGAAaagtttattaaaaattcatatgcGTGTGCACACCGGTGAAAAacagtttcaatgtaaattatgcCCGGAAAAGTTTAGAATCAGTAGCGATCTGCTATGCCATAGACGAAGTAAGCACACAGATGAATTGATTACCGATAATAAACTAATACCAGACTTTCAATGCAGTGTCTGCTTCAAAATTTTCGGTCTTAAATGGTTATTAAGAAGGCATATGTAtgtgcataccggtgaaaaaccgtttaaATGTAAATTATGCCCGAAAAAATTTCAACGCAGCGACGCACTTAAAAGCCATGAACAATCAGAACACACAAATCAAAAACCGTTTGTTTGTAAATTTTGTCCGGCAAAGTTTAGAAACAGTAGGACGCTGCTATACCATAGACAAACTAAGCACACAGATAAATTGATTAGTAAGGATAAACCACTATCAGATttccaatgcagtgtttgcGACAAAGTTTTCTGTCGGAAaagtttattaaaaattcatatgcGTGTGCACACCGGTGAAAAacagtttcaatgtaaattatgcCCGGAAAAGTTTAGAATCAGTAGCGATCTGCTATGCCATAGACGAAGTAAGCACACAGATGAATTGATTACCGATAATAAACTAATACCAGACTTTCAATGCAGTGTCTGCTTGAAAATTTTCGGTCATAAATGGTTATTAAGAAGGCATATGTATGTGCATACTGGTGAAAAACCGTTTAAATGTAAATTATGCCCGAAAAAATTTCAACGCAGCGACGCACTTAAAAGCCATGAACAAACAGAACACACAGATCAAAAACCGTTTGATTGTAAATtttgcaacaaagttttcgGTAAGAAATGTCTATTAAGATATCATATGCGGTCTCACACCGGTGAAAACCCGTTTCACTGTGAATTCTGTCCAGAAAAGCTTAGAAGCAGTACCGCGCTGCGTTACCATAGACGGactaagcacacagatgaaTTGATTAGTGCTGATAAGGCAGTATCAGACTTCCAGTGCAGTATTTGCTATAAAGTTTTTGGTGTGAAAACCCGATTAAAAAATCATATGCGTGTGCATAGCGGTGAAAAACCGATTGACTGTGAATTATGTCCGGAAAAGTTTGTACACAATAGAGCGTTGCTAtgccatagacgaactaagcacaccAAAGAATTCATTAGTGAGGATAAACCAGAAGCTGGGCTTTGA
Protein Sequence
MVNSQDMNIIFKPYLTIDFNLKSFPFFTQVDKEDDFPHNICGNCLKEIQQAYLFDLKCKKSEIILHQLREIRVKLKKLKEIPKQNDIVSEVAGELESIPKEDVMNLCDRNIGVSESSAIERIKPLVSQVTLKKKPDHTSRIIKNNPGQNELELNQNSPNFEIFGECDAEYQVLLKTEPDQNNLIIKDKESEDELQFSVTDFPVTFKSEPELDLGIDCYDEQLECSACLKQFQSLDIFRGHIVSDHLEENICKLCNEEFECSQIEHSGKHLPFSHLVAIEPDNPSDSSEESIRQTEKVPMTVIHKDEFFDKPYFQCKICSKVFNYRCRLVNHLRTHTGEKPVDCELCPEKPGNSSSSARTNHTDKLINDDKPVPDFQCSVCFKIFGHKWILRRHMHEHTGEKPFQCKLCPDKFQRCDALKSHEQTEHTDQKPFDCKFCPAKFRNSKTLLYHRQTKHTDKLIIKDKPLPDLKCSVCNKVFGKICLLRYHMRSHNGENPFHCEFCPEKFRSSTALRYHRRTKHTDELISKDKPLPDFQCSVCDKVFCRKSLLKIHMRVHTGEKQFQCKLCPEKFRISSDLLCHRRSKHTDELITDNKLIPDFQCSVCFKIFGLKWLLRRHMYVHTGETPFKCKLCPKKFQRSDALKSHEQSEHTNQKPFVCKFCPAKFRNSRTLLYHRQTKHTDKLISKDKPLSDFQCSVCDKVFCRKSLLKIHMRVHTGEKQFQCKLCPEKFRISSDLLCHRRSKHTDELITDNKLIPDFQCSVCFKIFGLKWLLRRHMYVHTGEKPFKCKLCPKKFQRSDALKSHEQSEHTNQKPFVCKFCPAKFRNSRTLLYHRQTKHTDKLISKDKPLSDFQCSVCDKVFCRKSLLKIHMRVHTGEKQFQCKLCPEKFRISSDLLCHRRSKHTDELITDNKLIPDFQCSVCLKIFGHKWLLRRHMYVHTGEKPFKCKLCPKKFQRSDALKSHEQTEHTDQKPFDCKFCNKVFGKKCLLRYHMRSHTGENPFHCEFCPEKLRSSTALRYHRRTKHTDELISADKAVSDFQCSICYKVFGVKTRLKNHMRVHSGEKPIDCELCPEKFVHNRALLCHRRTKHTKEFISEDKPEAGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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