Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770262.1:13976070-13978362[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00036 0.59 11.6 2.1 13 44 75 103 66 103 0.87

2 11 0.0075 12 7.4 1.0 17 39 108 127 105 131 0.80

3 11 0.53 8.7e+02 1.5 0.5 6 30 126 151 124 158 0.73

4 11 0.0027 4.5 8.8 0.3 15 40 194 216 189 219 0.87

5 11 0.61 1e+03 1.3 6.4 15 29 299 313 295 355 0.84

6 11 1.9 3.2e+03 -0.3 0.5 18 28 403 413 396 425 0.83

7 11 9.2e-05 0.15 13.5 3.3 13 40 427 451 414 459 0.87

8 11 0.00029 0.48 11.9 1.0 16 41 464 486 455 488 0.85

9 11 0.33 5.5e+02 2.1 0.2 18 30 494 506 489 516 0.78

10 11 0.015 25 6.4 2.8 19 40 523 541 510 543 0.86

11 11 0.15 2.5e+02 3.2 0.3 18 41 550 570 548 572 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00036	0.59	11.6	2.1	13	44	75	103	66	103	0.87
2	11	0.0075	12	7.4	1.0	17	39	108	127	105	131	0.80
3	11	0.53	8.7e+02	1.5	0.5	6	30	126	151	124	158	0.73
4	11	0.0027	4.5	8.8	0.3	15	40	194	216	189	219	0.87
5	11	0.61	1e+03	1.3	6.4	15	29	299	313	295	355	0.84
6	11	1.9	3.2e+03	-0.3	0.5	18	28	403	413	396	425	0.83
7	11	9.2e-05	0.15	13.5	3.3	13	40	427	451	414	459	0.87
8	11	0.00029	0.48	11.9	1.0	16	41	464	486	455	488	0.85
9	11	0.33	5.5e+02	2.1	0.2	18	30	494	506	489	516	0.78
10	11	0.015	25	6.4	2.8	19	40	523	541	510	543	0.86
11	11	0.15	2.5e+02	3.2	0.3	18	41	550	570	548	572	0.78

Sequence Information

Coding Sequence: ATGGTGAAAAAATGTGAGGAAATAGAAACGTTTGACGGAGAGCCTGATCGTATTGATGACGATGACGATGACGACATATCCCAAGATCCCATAAATATTAAAATCGAATTGGAAGAAATTAAAGATCTGCAACCGAATTGTGAGCTCAGATTAAAAGATGAACAAAATAGCAGTACTGAACCGGAAATTACAATCTCATTTGCCGACGAGATCCAATCCGATGCCAAAAATAAATTCCATTGTGACGTCTGTAAAAATTCATACAATCATAAGAAGTCGTTGATAAGACACCTAAATAAAGCACACAATGCAAACATTTCGAATAGATGTAAGATTTGTAATAAagTTTTTGCCAAGGGCACACAGCTCGAAGCACACATGGAAAAGCACACAAAGAATGAAGCATTTATCTGCAATACCTGTGATGAAgtatttgaaacgaaattgcaatTGAAAACGCATCATGCTACTCATCCCAGAACAAcGCGAAAGCAAACCattgctaaaaatgatgttCTAACCGAAATTAAACTCGAATTGAATGAGGTGGACAATTCATTGTGTATGCCAAATGGAACGAAAATAATTCAATGTAAAATTTGTCGTGAGCAATTCGCAAATATCGAGAAATTAAAAGCACATCTAAGTACTCATGCTGCCGAAGATTCGTTTGAAAGTGTCGATCTCAACAACTGCGAATTGGTGAAATTGTTCAGCCCCATGGAATCGATGGAGCGCAACGAAATAATTAGTTTTATAATTAAAAGTATAAACGAaggaaatttatcgaaattctACTCGATTTCAACCCAATCCGGAATCGAATTATCGCTCAGCGATTCGGAAACCGAGAACGATGCCAACGACGACGATGACGAAAATTTGATTGCGATTCAaaaatatgaatgtaatatTTGCTATAAAATCTTCAATCGACGTTACAAAATTCTCTACCATCAGAAAAACGAACATGAAAATAACGAATTAGAACATCAATGTACGAAATGTTTATGGAAATTCGCAAGCGGTAAACTTTTAACGGATCATTTACGATCGCTGTGTGATAATGAGAATAAGCAATTTTCCTGCAACGAATGCAATATGCGATTTATGTGGATTGAGAATCTTGATTTGCATAAATCCAGTCGACATTCGGTCCAAGCAATCCGACAACAGAAAAAAGAACGGGCTAAAGAAATAGGCTACGTTTGCGAGACGTGCGATAAGAAATTCGTTCGTTACGAACATCTCGAACGTCATAAGACCATTCACTTGCCCAATGATAAGAAATTTGAATGTACGATATGCAAAAAGAAATTCAATCGTAAGGATAATATGCGATCACATATGCGAATTCATAACGCAAATCGAAACAAGGACGAATCGGATAAGCACTTGTGTGTCTATTGCGGTCGTAGTTTTACGAATTCGTCGAATCTAATAGTGCATATGCGACGACACACTGGCGATAAACCATACAAATGTGATTTTTGTGGTAAGGGTTTCCCACGATCGTCTGATTTACAATGTCATCGAAGGACGCACACTGGCGAGAAACCGTGTCTGTGTACTATTTGTGGGAAAGGTTTCTCGCGATCAAACAAACTCGTACGACACATGCGTATTCATACCGGCATTCGTCCTTACAAATGTACCTACTGTGATCGTGCTTTTACGCAATCCAATGATCTAACGCTACACATTCGTCGTCATACTGGGGATAAACCGTACGTTTGTGGCGTTTGTGGCGATCGTTTCATACAGGGCACAGCATTACAGTCACATCGTCGCATGAAGGGTCATTACGAAGGACCTAATCACAGTGCTCCGTTCTCCAGTATCAGCGTAAATAATCCGAATCGAATGAATTTTGCGAATCGTGTCGATCAAATTGGTTTGCCGAAACTCGATACGGTACCGCCGACCGAAATCAAACCTGTCGGCCGGACGGGTAATTTTCGAACACTGATGGTACGGAATGAGGGAGATTTAGAGGAGGATGATGTTATACCGTCGGCAATAATTGAAGTTGCTCGCAGTAATGATAATGTGCTTAGTCAAGCAGTTTCTTCGGTACAGCTCGACCAAAATGATTTCTTTATGCCGTATGCATAA
Protein Sequence: MVKKCEEIETFDGEPDRIDDDDDDDISQDPINIKIELEEIKDLQPNCELRLKDEQNSSTEPEITISFADEIQSDAKNKFHCDVCKNSYNHKKSLIRHLNKAHNANISNRCKICNKVFAKGTQLEAHMEKHTKNEAFICNTCDEVFETKLQLKTHHATHPRTTRKQTIAKNDVLTEIKLELNEVDNSLCMPNGTKIIQCKICREQFANIEKLKAHLSTHAAEDSFESVDLNNCELVKLFSPMESMERNEIISFIIKSINEGNLSKFYSISTQSGIELSLSDSETENDANDDDDENLIAIQKYECNICYKIFNRRYKILYHQKNEHENNELEHQCTKCLWKFASGKLLTDHLRSLCDNENKQFSCNECNMRFMWIENLDLHKSSRHSVQAIRQQKKERAKEIGYVCETCDKKFVRYEHLERHKTIHLPNDKKFECTICKKKFNRKDNMRSHMRIHNANRNKDESDKHLCVYCGRSFTNSSNLIVHMRRHTGDKPYKCDFCGKGFPRSSDLQCHRRTHTGEKPCLCTICGKGFSRSNKLVRHMRIHTGIRPYKCTYCDRAFTQSNDLTLHIRRHTGDKPYVCGVCGDRFIQGTALQSHRRMKGHYEGPNHSAPFSSISVNNPNRMNFANRVDQIGLPKLDTVPPTEIKPVGRTGNFRTLMVRNEGDLEEDDVIPSAIIEVARSNDNVLSQAVSSVQLDQNDFFMPYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00324642;
90% Identity: iTF_00324642;
80% Identity: iTF_00324642;