Ctib001598.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- -
- Assembly
- GCA_963669355.1
- Location
- OY770262.1:34745542-34748749[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00045 0.74 11.3 1.4 18 44 198 221 188 221 0.89 2 23 1 1.7e+03 0.5 0.1 19 41 238 257 233 262 0.82 3 23 0.00041 0.67 11.4 0.4 18 43 272 294 261 295 0.88 4 23 1.1 1.7e+03 0.5 0.1 19 40 312 330 306 336 0.82 5 23 0.00043 0.7 11.4 0.1 18 43 346 368 339 369 0.91 6 23 1 1.7e+03 0.5 0.1 19 41 386 405 381 410 0.82 7 23 0.00041 0.67 11.4 0.4 18 43 420 442 409 443 0.88 8 23 1 1.7e+03 0.5 0.1 19 41 460 479 455 484 0.82 9 23 0.00041 0.67 11.4 0.4 18 43 494 516 483 517 0.88 10 23 1.1 1.7e+03 0.5 0.1 19 40 534 552 528 558 0.82 11 23 0.00043 0.7 11.4 0.1 18 43 568 590 561 591 0.91 12 23 6.1 1e+04 -1.9 0.1 19 40 608 626 606 633 0.76 13 23 0.0004 0.66 11.4 0.4 18 43 642 664 631 665 0.88 14 23 1 1.7e+03 0.6 0.1 19 41 682 701 676 706 0.82 15 23 0.00043 0.7 11.4 0.1 18 43 716 738 709 739 0.91 16 23 1 1.7e+03 0.5 0.1 19 41 756 775 751 780 0.82 17 23 0.00041 0.67 11.4 0.4 18 43 790 812 779 813 0.88 18 23 1 1.7e+03 0.5 0.1 19 41 830 849 825 854 0.82 19 23 0.00041 0.67 11.4 0.4 18 43 864 886 853 887 0.88 20 23 1.1 1.7e+03 0.5 0.1 19 40 904 922 898 928 0.82 21 23 0.00043 0.7 11.4 0.1 18 43 938 960 931 961 0.91 22 23 1 1.7e+03 0.5 0.1 19 41 978 997 973 1002 0.82 23 23 0.0006 0.99 10.9 1.3 18 43 1012 1034 1001 1035 0.88
Sequence Information
- Coding Sequence
- ATGGACGGTATTTCCCACGAGGTGCAATCAGCACAAAATGAACAACTAGACGACAGTGCTGCAGCAGGTCATTCGTTGGACATGGATATGGAAGAAGTCTGCAAAGACGCGGACAACTTGCAGACTGTCCAATCCATCACGTACCTACCGCAATTTGTAATCCGTGAATTGGATTCAGCGGGAAAAACTATACACACCTATTCCCCTTTTGCGCAGCACGACGGAAAAGTCATTTTCAAGCTGGACACGAAAGAACGAAATTCCAAGGGGAATGGAACGGTTCCTTCGCAGCCGCAGTTATATAGTGTGTCCGAACACCTTCCTGGAAGTGCAGTTCCTTCGAGTAACGAAAGAATTGCCAGCACGGAAATGGACGAAGCCCGCGACGATACAGTGAACAATTCTGTCGAACTCACCACCACTGCAAAGAGACCTTTGAAAGCAGTGAAGAATTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACACCACGTCACACACATTCACAAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCATTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGATGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCCTTAAAATGTTGGAAAAACCCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCATTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGATGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCCTTAAAATGTTGGAAAAACCCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACAGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCCTTAAAATGTTGGAAAAACCCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCATTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGATGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCCTTAAAATGTTGGAAAAACCCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACAGCACGTCACACACATTCACGAAGAACTGGAAAAGCACGAAACGCAGCACAAAGGAGGAAAACCCTTCGCCTGCCAGCAATGTCCGAAAACGTTTACACGGCGTCAGGAGCTGGACCGACACCTCGTGTCGCACGAGCGCCGTCGCcttaaaatgttgaaaaaaccCATTCCAACTTGCGACTATTGTGGGAAGATTTTCAAACGCCCGTTTAACCTGAAACACCACGTCACACACATTCACGAGCGTCACCGCTTGAATATCCCGCAGTGa
- Protein Sequence
- MDGISHEVQSAQNEQLDDSAAAGHSLDMDMEEVCKDADNLQTVQSITYLPQFVIRELDSAGKTIHTYSPFAQHDGKVIFKLDTKERNSKGNGTVPSQPQLYSVSEHLPGSAVPSSNERIASTEMDEARDDTVNNSVELTTTAKRPLKAVKNWKSTKRSTKEENPSPASNVRKRLHGVRSWTDTYERRRLKMLKKPIPTCDYCGKIFKRPFNLKHHVTHIHKELEKHETQHKGGKPFACQQCPKTFTRRQELDRHLVSHERRRLKMLKKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQEMDRHLVSHERRRLKMLEKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQELDRHLVSHERRRLKMLKKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQELDRHLVSHERRRLKMLKKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQEMDRHLVSHERRRLKMLEKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTQRQELDRHLVSHERRRLKMLKKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQELDRHLVSHERRRLKMLEKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQELDRHLVSHERRRLKMLKKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQELDRHLVSHERRRLKMLKKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQEMDRHLVSHERRRLKMLEKPIPTCDYCGKIFKRPFNLKQHVTHIHEELEKHETQHKGGKPFACQQCPKTFTRRQELDRHLVSHERRRLKMLKKPIPTCDYCGKIFKRPFNLKHHVTHIHERHRLNIPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00324621;
- 90% Identity
- iTF_00324621;
- 80% Identity
- iTF_00324621;