Ctib030865.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- ken
- Assembly
- GCA_963669355.1
- Location
- OY770263.1:287332154-287341772[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-11 2.5e-08 34.9 0.0 4 44 260 300 260 300 0.93 2 3 0.34 2.9e+02 2.7 0.0 28 38 330 340 308 346 0.89 3 3 1.3e-15 1.1e-12 48.8 0.0 3 40 365 401 363 403 0.95
Sequence Information
- Coding Sequence
- ATGAATCACTTGAAATGGATGTCGCATTCGGCGACAATAATGGAGTTGCAGCGGAGCCTGCATCAGGACAGCAGCGCTTGCGATGTGATTGTGATTGgcaacaataataaagtatttcgtGCCCATCGCTTTTTACTGTGCTTTGCGAGCGACTATTTTAAGGAAATGTTCCGCGAAATTCCCGTCCACCAGGAAGTCACCGTGCTCCTTCCAGATGTGCGCTCGAGCATTCTGAAGAACATCCTGAATTTTATTTACACGGGCGAAGTTTGCGTTAGTTCAGCCGATTTATCCGATTTTCTCGAGAATATCAACCTGCTGGGCATTAAGAGTGCCATCAGCTTCGAGTGTCATATGAACAAGCAGAAGTCGCTCGGCAAGGAAGTAACGATCGAACCGATCCTTGTGGAGGAGGACGAAGCGGAGCAGCCGAGCGGATCGCAGAAACAGGAAGAGGATTTAGACGGCCAGCAGAGCACAAAAGATTTCGATTACTTGGAAGTTTACAATGGCGACGAAAAAATCTCTCAGTATACAATCGAACATTCGAACAACGACTACATTCTGGCTGAAAATACCGATTCAACTTTCGTACTTCCTGTTGTAAAGAGCAGCGACAATGAGATCACAATGAAGCAACGATACGTTAGTGAAATACAAATGGAAGCAGACTATCAGGAAAGCAGCAATCAAACACCGCTCGAATCGCTCAAATCGGAATCACCGGAAAAACTGAAATTAGAATCAACTCAAACAGCGGCACCATCACGAAGCGTTGCATTCGATGCTGCCGTCGAAGATGTTCTAAAGTTCGGTGCTAGTTTACAGAAAGCCGCCACAAAATATAACGTTTCAAAAACTGTGCTGTGGCGTAAGGTACGAAAACATCCCGACTATAAAATCGAACGTGAACATCCAATGTTAAATTTGGCAATCGAAATGCTCGAAAAGGGGGAATCATTGAAGACAATAAGCCATCTAATTAAAATTCCCATATCGACATTGCATCGACATAAAGTGCGCTTATTGCAGGAGGGTCGATTGCCCGATCACGTTCAAGTAAAACGTCGCGATTCCAAAGACAATCTAAAGGAACGTTTGGCCGATGCAATTGGTGCCTGTTCTCGCGGCATGTCACAGAATCAAGCTGCCAATGTTTATTCCGTACCGAAATCGACGCTATGGCGGCACCTCCAGAAGCACACGCTTAATGTTAAAATCGAAGCGGGCATTGCCGATGAGATATCGATATCGAGTTAA
- Protein Sequence
- MNHLKWMSHSATIMELQRSLHQDSSACDVIVIGNNNKVFRAHRFLLCFASDYFKEMFREIPVHQEVTVLLPDVRSSILKNILNFIYTGEVCVSSADLSDFLENINLLGIKSAISFECHMNKQKSLGKEVTIEPILVEEDEAEQPSGSQKQEEDLDGQQSTKDFDYLEVYNGDEKISQYTIEHSNNDYILAENTDSTFVLPVVKSSDNEITMKQRYVSEIQMEADYQESSNQTPLESLKSESPEKLKLESTQTAAPSRSVAFDAAVEDVLKFGASLQKAATKYNVSKTVLWRKVRKHPDYKIEREHPMLNLAIEMLEKGESLKTISHLIKIPISTLHRHKVRLLQEGRLPDHVQVKRRDSKDNLKERLADAIGACSRGMSQNQAANVYSVPKSTLWRHLQKHTLNVKIEAGIADEISISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00324562;
- 90% Identity
- iTF_00324562;
- 80% Identity
- iTF_00324562;