Ctib003983.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- -
- Assembly
- GCA_963669355.1
- Location
- OY770262.1:85360476-85370592[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.1e-11 6e-08 33.7 0.0 1 38 468 506 468 511 0.91 2 4 3.9e-13 3.3e-10 40.9 0.2 2 39 523 560 522 563 0.94 3 4 2.8e-17 2.4e-14 54.2 0.0 1 45 577 622 577 622 0.98 4 4 1.1e-17 9.6e-15 55.4 0.1 1 43 629 672 629 673 0.97
Sequence Information
- Coding Sequence
- ATGTGCTTTAGGCATTTTAGGCAATATAAAGCGCATTTAGAGGGACTATTACGAACCGCCGAACAATTGAAAATCAAAGGCTTATGTGAGACAACAGACCAATCTGAAGAATCAGCAAATGAAGCTACGACAATAACAGTTCCGCTACAAGAGCATATCCAACAACCTACTGTTAATACCGGTAATACTGTTAATATATTGAGTCACGTTAATTCGAATCCACTTCGTAAAACGAGAATTCGAAGACGTTCAAAATCGCCTGAAACAAATTCTTCTTCGATAACCAGTGCAACTCAATCGTTTACTACATCATCGATAGTTGGTTTGAATTCAACAATATCGTCAGCAACGAGTCTTGCTGGAGTTGGTTCTGTACCTATCGCAACAACACCTGTTGGTATTAAGTCCGATTCTCATCAACATCATCaccagcagcaacaacaacatcagcatcaacaacaacaacagcaacagcagcaccATCATCAGCAACAGCAGCATCAACAGCACCAACACCACCAACAACATCAGGTTGCCGGCACAAATTCAATTGATAGTGGCCAAGACGGCGGTAGCTCAATAACATCATCGAAACCTGCGAAAATCATCAAAACTGAAGACACATCAAATAATGGAAACAACCTTGTCCCAACTGCCGGAACGATTCTAACTCAAATTGTAGTTGCGCGAGATTGTAAAGACTCTAAAACTATGGCCAGTTTAGGAATGGGAATGAACGGTGGACTTCTAGGTGTTCCTATGGGATTTCTAGATTTCGCACCTGAACCACCAGCTCCATCGGCCACACCCGTTACAGAACATGTCGATATGTCCTGTACGCCCAGCACTGATACACGAGACTTATCAAATCCCACCGAAACGCTCGATATCGACAATCACATAGCCCAGCATATTATCCATCGATTAGATCAATCGCCAATGCATCAGATGCAACATCAGACGAGCACAGCGGACGAGAGtaattcaaatttaatacaaaatattaagacgGAAGTTGTTGAGAAGCAAcatcaacatcatcatcatcaacagcagcaacaacagcagcagcaacagcaacagcaaccacatcatcatcagcagcaacaacagcagcagcaacaactgCAAGGACAATCGCAACAACAGACCCACCATCAGGACATGTCCGGGACGACTGTAATGGAAATCGATCCGAACAATATAAAACACGAACCAGCTATGATAATCACACCAGAAATCGTTACAATGATGACAACTGGAAATATGGACATTTATAATTCCGATACCAGCGAAGATTCTCTTATGATTGCAAACGGCTCACCGAACGATAATAACGAACCGCACTACACGAATCTCGATCAACAGAACGATCTAAAATTGAACATACCGAAAACATGGACACCGGAAGATATGAATTCTGCCTTGGACGCATTGAAAAATCATAATATGAGTCTGACAAAAGCATCGGTTACGTACGGTATTCCGTCGACGACATTGTGGCAGCGGGCGCATCGAATGGGCATCGATACGCCGAAAAAAGAGGGTACGACGAAATCATGGAACGAAGAAGCCCTAAATAGTGCTTTAGAAGCTCTACGAACCGGTCAAATATCGGCCAATAAGGCGTCGAAAGCATACGGTATTCCGTCCTCAACCTTGTATAAAATAGCTCGACGTGAAGGAATTCGATTGGCAGCACCGTTCAATGCAGCACCGACGACATGGACGCCGGAAGATTTGGAGCGTGCATTAGAAGCTATACGAGCTGGTCATACATCCGTCCAAAAGGCTAGCACTGAATTCGGTATTCCAACGgGAACACTTTATGGGAGGTGTAAGCGAGAAGGAATCGAGTTATCCCGATCGAATCCAACCCCTTGGTCAGAAGATGCTATGAATGAAGCCTTAGTAGCAGTGAGagttGGTCACATGTCCATAAATCAGGCAGCTATTCACTACAATCTACCATACAGTTCACTGTACGGTCGATTTAAACGTGGGAAATACGAAGCGACGGGAACAGGAGTTGGTTCCGGAAACAATAGTGGAAATACTTCAGGAAATCTGGAATTAATTGAACATAGTCCGGAAAATTCGTTGCACATGTTCCAGCAGTTCCAGTATAGCCCGGGTCCATCAACGACAccgcagcagcagcaacaacaacaacagcagcagcagcagcagcaacaacagccGCAACTCCATcatcaacagcagcagcaacaacaacagcagcagcaacagcagcagcaacaacaacaacaacaacagcatcaacaacaacagcagcagcaacaacaacagcagcagcagcaacatcaTCAGCCACAACAACATCACCTCCAGCAGCATCCTCAACttcaacaacatcaacatcCACAACAACACCTTCAACAACTCGACGTAGTCACATCGAGTAGTCAAGTTCACACACAAACAGGGCAAATTCAACAAATTTATCACCATCACAGTACACCAGAAAGAAGTTGA
- Protein Sequence
- MCFRHFRQYKAHLEGLLRTAEQLKIKGLCETTDQSEESANEATTITVPLQEHIQQPTVNTGNTVNILSHVNSNPLRKTRIRRRSKSPETNSSSITSATQSFTTSSIVGLNSTISSATSLAGVGSVPIATTPVGIKSDSHQHHHQQQQQHQHQQQQQQQQHHHQQQQHQQHQHHQQHQVAGTNSIDSGQDGGSSITSSKPAKIIKTEDTSNNGNNLVPTAGTILTQIVVARDCKDSKTMASLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMSCTPSTDTRDLSNPTETLDIDNHIAQHIIHRLDQSPMHQMQHQTSTADESNSNLIQNIKTEVVEKQHQHHHHQQQQQQQQQQQQQPHHHQQQQQQQQQLQGQSQQQTHHQDMSGTTVMEIDPNNIKHEPAMIITPEIVTMMTTGNMDIYNSDTSEDSLMIANGSPNDNNEPHYTNLDQQNDLKLNIPKTWTPEDMNSALDALKNHNMSLTKASVTYGIPSTTLWQRAHRMGIDTPKKEGTTKSWNEEALNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYEATGTGVGSGNNSGNTSGNLELIEHSPENSLHMFQQFQYSPGPSTTPQQQQQQQQQQQQQQQQPQLHHQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQHHQPQQHHLQQHPQLQQHQHPQQHLQQLDVVTSSSQVHTQTGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -