Basic Information

Gene Symbol
Arid5b
Assembly
GCA_963669355.1
Location
OY770263.1:41846180-41871873[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.5 3.7e+04 -3.4 0.0 3 24 438 461 437 464 0.68
2 2 1e-13 8.4e-10 40.3 0.2 2 89 475 555 474 555 0.88

Sequence Information

Coding Sequence
ATGATAAAACGATTGTGGCTCTCATTTGGCGACCCGAAAATCGGTCGCTTACTGCGGACGCAAGCCCAGGTGCACGTACTCGCTAACCCGGATCTTGATCATATGTTGGTGGTTGGAGGGCCTTGTGGCTTCCATGGTCCTTATACGTTTTACAAAGGCTTAGAAATCGCGCCTGCATCAACCGCAATCACCTTAAATGGACTGCACTGTTCACGAAGTCAGGCTTCAGTAAATAATTCACAAATATCCTCAACGGcaggaaataaaacaaaaccggCAACAAGGAAATGTTCCAGTGATAGACGAGTGGATAATACCGAAAATGATTCAAGACACCAGAAACCATTAATATTAGCTCTTGGCGACTGTATACCTGTGAAACCGTGGTCAGATTCATCAATAGCATGTTTAGCAGAAATCAGAATGATTTGGCGTGATAAAAATGAACCATCGCTACTAACAGGCTTAAGACTTTATTTTCTTCCCGAAAATACGCCGCTGGGACGGAGTTCACATGGAGAGGATGAAGTTGTTGCAATATCCGACAAAGTTGTTATTCGTGCGGAAGATTTGCTGAATTGGCTCGACGAGAAGCTTCAATGGAATTGGGGACTAGTAAAGACACCGTGTCCGAAAGCGAACATCAAGTCCAGAAACCACACGCCGAAAAGCTCCGCTGAATCCGCCACAAGTACAGTGGCTTCTAGCATCTCGCTACGTAATTCACAATTGGATTTTTCCGATGTCGAAAAAGAAAAACGTTCAGATTCAAACGTAAGCACCCGAATCGCAGTTCTCAGTTATCCAAGATATTGCCGTTATAGAGCAACACTAAAACGACTGGAAAATGTTGATGACGAATGGTTCAAGAGCTCTGTGGTAGCTGCCCTCTGTGGATTTTCGTCGGTCTCGTCGGAATTCCGTGTTATGTTTTGCAGGGACACATTCGATTATCCAGAGCTCGAAACGCATGAACTCTTATGCAATCACTTAGCGCCTAAATTAAAAGGACGCCCCAgaggaagaaaaaagaaaagccgCTCGGAATCACCATTTTCGGGCAAACGTATCGATTCCGGTAGTGAATCTAATGATTctgatatttcaatattttcaattggaaaAAATATGACCATAAAAGTTGAACCTCGATCACATTTGCGATTCAATCATAGGCCGGCTCGAACAAAATTGAAATCAGAGTCTGACTATAAGCCTTGTAAACCGTTCGACATTAAGAAAGAGGCAGACGATGATATTAAGGATGTCAAGTCGCCGCCACGATTGCGCGTTAAAGATGAAGTGGTTAATAAAAAGTTTATTGAAAAGGCGAAAAAGTTTCTACGGGCAAAGCCCATTGTCAAGAGAATACAACAAGTTCCTCTAGTTCGGCCAGCCCCATGTAGTAGCAGTCCATCCGAAGAGAAATTCTTCCTTCGGAAGCTGCATGAATTTCATGTTAAGCATGACAATGTGATACCAAAAATGCTGTGGCTGAGCCTGAAGGACGTGCATCTTTACGCGATTTTTCGTCAGGTTAAGAAACTCGGCGGATATGACGCGGTCACTGCAAGCAAACAATGGAAAATGCTATTTGGTGAAAACAATGAATCACATTTAACAATTACAAGAAGAAAATACGAAAGAATCCTTCTGCCGTTAGAAAGATCGGAGCTAGTTACCAAAAAATCGTCATCAACAAAATCCGAAATCAAAAAAGAACCGATTGCTGTTGAAGAGATCGCACCAAAGGTTCCTAGTCTGAAAGTTACAATTAAGAAGGAAAAGAAGAGCGAATCCGAGTCGGAACTCAGTAAAGAGGATATGGCAACGATACAAAGCAAAGTAAAGTCGAAAATTCCATCTGTAGAGGATGAAGTCGATGTAAAGCCTGAAATGCCGGTGGCAGAGCCCGAAAAAGAAATATCCGTCACGACAAGTTCGGTATCGGTTTCGCCAGTGTCTGTTCCAGTTACGGTAATAGTAGAATCACCAGATAACCGGAAAAGAACGTCGTCATCGTCTGATGAAGATATAAAGCCATTAATCTCCACATTGCCTACCACTGCATCATCAACAACTACTACAACCACAACAACAAAATCGAAAACAACATCATCCTCACAGAAAATACAAATTCAACAGCCACACACGACAATTACTGTTCATCAGACGACAATACATCCGCAAACGCATTCCAAACATTCGACACAAAATCAGATTACAAATCAAATTCAAATCACGAATCAAATTCAAATACAGCAGATAACTGTTCAACCAAATGGAACTGATACGTCAAATACGGCGAAGAGTTCATCGGAATTCCGTTGCAATATAAAGCAGGACGTGGACGGTGGACAAGAAGTAAAGATTGAAAATCGAGATACTAGCAATACTTCACAGTCTCGTGATGAGAATTGTGTGGTTACTGCTCCAGCATCCTTACGCACTACAGTACGGGTTAAAAATGAACTGAAACCATTCGAAAAGGAAAATATTCCATTCATTGCAGCTGGTACGACAATAACACCGGTCTTATCACAAGCTGGCGCAACGAAAAAAGCGACGGACGTGATTGATCTGGCCGATAGCGACGGAGATAGTGAAAGTTCGATATCAATACGTAAAAGAGCTTCGCCTAGCCTGGAAAACACAATTTTACCGCCGGTTAAAAAACGCAAATTAGATATTCTGCGTGAAGGCGGTCTAGAAGTGACTGCCATAAGTAACACACATGGGATAATTTCAACATCTTCCGTATTGCCGCATGTTTCTCTGCGAATACCTTCTCAAACTGCGATTAATCCTGTAAGACGTTTATCAGATGAAGAATTCAGTTTACCTGCCGCAACAAGCTTGATAATTCCAGTTAATGGATTGAGAAACGGTACACCGAAAATCACGGCGCGAAGTATGTACTCGAAGACTGGGAAAATATTTGGAAATCCGAAAGATATTTTGCTGCCAACACCGCCTGCACAGAGTAATTCCGGCGAGATTCTCGACCTAACAGTTAAGTCTCCGTTGAAGTTTCCTTCATTGGAAATTCATCCTATACCGTCAGTTCGTCACGTTCGATCGCCACCATTGGGCCAGTCCTCGTCATCTGCGATCAATTTAAGCAATCCGAAACCAAAATTAACCGATAACGGATTACAAATCACCTTGGTGCCTCAACATCAGCAATCAACTGTTACGCCACCTCTTACTCATGTCCAGAATATCCATAATTCACAAAATCACAACATTAAAAGGAAGAGCGTCGATATTCTTTCAGTGCCGGTAGCTACCTCGTCGTCAAGTCAGCGACAAACACAGTCACAATCGACATTGCGTACTAAACAAGATAAGAAGCGAAATACGTCGCCGAATCAATCGTCGCCCCCGAAACCTGCCTTGCCTATCTCATCCAACTTTCCCAATTCCAAGGTTCCACCTTTTCCGTTTCAACCTTTCACACATTTGGCTGCAGCTGCTCCGCATCCATTCCTGCTGAATCCTCTATTCCTATCAAATTTGTACGCCCAGAGGCCGAATCTTTTTACTCCTAACCAAATTCCGCAGGAGCTTCTACAGCTCTACAAAAATTTGCCGACAGAAATGGGAGCTGTGCCGATCTCCAAAagctaa
Protein Sequence
MIKRLWLSFGDPKIGRLLRTQAQVHVLANPDLDHMLVVGGPCGFHGPYTFYKGLEIAPASTAITLNGLHCSRSQASVNNSQISSTAGNKTKPATRKCSSDRRVDNTENDSRHQKPLILALGDCIPVKPWSDSSIACLAEIRMIWRDKNEPSLLTGLRLYFLPENTPLGRSSHGEDEVVAISDKVVIRAEDLLNWLDEKLQWNWGLVKTPCPKANIKSRNHTPKSSAESATSTVASSISLRNSQLDFSDVEKEKRSDSNVSTRIAVLSYPRYCRYRATLKRLENVDDEWFKSSVVAALCGFSSVSSEFRVMFCRDTFDYPELETHELLCNHLAPKLKGRPRGRKKKSRSESPFSGKRIDSGSESNDSDISIFSIGKNMTIKVEPRSHLRFNHRPARTKLKSESDYKPCKPFDIKKEADDDIKDVKSPPRLRVKDEVVNKKFIEKAKKFLRAKPIVKRIQQVPLVRPAPCSSSPSEEKFFLRKLHEFHVKHDNVIPKMLWLSLKDVHLYAIFRQVKKLGGYDAVTASKQWKMLFGENNESHLTITRRKYERILLPLERSELVTKKSSSTKSEIKKEPIAVEEIAPKVPSLKVTIKKEKKSESESELSKEDMATIQSKVKSKIPSVEDEVDVKPEMPVAEPEKEISVTTSSVSVSPVSVPVTVIVESPDNRKRTSSSSDEDIKPLISTLPTTASSTTTTTTTTKSKTTSSSQKIQIQQPHTTITVHQTTIHPQTHSKHSTQNQITNQIQITNQIQIQQITVQPNGTDTSNTAKSSSEFRCNIKQDVDGGQEVKIENRDTSNTSQSRDENCVVTAPASLRTTVRVKNELKPFEKENIPFIAAGTTITPVLSQAGATKKATDVIDLADSDGDSESSISIRKRASPSLENTILPPVKKRKLDILREGGLEVTAISNTHGIISTSSVLPHVSLRIPSQTAINPVRRLSDEEFSLPAATSLIIPVNGLRNGTPKITARSMYSKTGKIFGNPKDILLPTPPAQSNSGEILDLTVKSPLKFPSLEIHPIPSVRHVRSPPLGQSSSSAINLSNPKPKLTDNGLQITLVPQHQQSTVTPPLTHVQNIHNSQNHNIKRKSVDILSVPVATSSSSQRQTQSQSTLRTKQDKKRNTSPNQSSPPKPALPISSNFPNSKVPPFPFQPFTHLAAAAPHPFLLNPLFLSNLYAQRPNLFTPNQIPQELLQLYKNLPTEMGAVPISKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00203279;
90% Identity
-
80% Identity
-