Cnem007454.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- Zmiz1
- Assembly
- GCA_949316135.1
- Location
- OX438603.1:4561582-4570988[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.087 1e+03 -0.0 0.9 4 24 551 571 548 576 0.88 2 2 8.1e-26 9.6e-22 76.9 4.6 1 50 633 682 633 682 0.98
Sequence Information
- Coding Sequence
- ATGCAACAAGGACACCGCAATACGAGCGAATCGTCCTCTGTCGTGCAGCCGTATCCGCGCGCCAAGGCGGCGGGCGGTGGCGGTGGCGGTTGGCGGTTGGCGGGCGGCGAGCGCAGTCAGAGACCGAACACGGCCGAATGCCGTGCCGAGTGTCGAGACGACGACGTACAAGTGAGTGGGGGACGGGGCGGGTGCGCCACTTATCGCAGCGAGCTGGCAACGCCGCACGGGGTGGGAGCACCCCGCACCGCTACCTCTCACCGTCCCGTCCGTCGGTCCGTCGCCGGCTCGCTCGCCAGTTTACCTTTGGTGGTCGTGAATACAGTCGTCGCTGCACTAGAGGACAGGACGGCGAATTTTGGTGCTGCAGGATACCCTGGGATCTCTGGGAACTACTCGGGAGCCAGCGCTCCCGGTGCAATCAAATTCAACCCTCAGCAAGGGACTATTGGATACCGTGTCAATAACCCTAGCGGATATGGATGCGCCGTTGGAGCGGGCGCGATGAGCGGTGGCGGCGAGAACGCCCAATTCGGCGCCACCGCCGCAATGGTCGCCGCGGCCTCCACGGTCGCGATGCAGGACTCGCAGCCATTCTCCCAGATGCAAAATAACATGACGATGGGAAATCCCCAGTATAGCGCAATGAATGGCTACGGCCAGCAGCGTAGCCATAATCCTGGTATGACTGGCATGGGGATGGGCAATGGTGGCATGAATGGCATGACCGGCATGGCCCAGATGGGAAATGCCGGGATGAACGGCATGAATCCAATGGCTTCAATGGCTAATATGGGAATGCACGGTAACATGATGCCCTCGCAAATGGGTCCAGGACAGATGGGAGGTTCAGCAAAGATGGGCCCAGGGTATCAGAGGCGACACACGCCTTACCCGCAAGGGCAGATGCTCATGACTCAGCGAAAAACGCAATATATGGGGGGCCAACCTAACTTTGGACCTGGGCAATACCCTGCTGGTTACGGAGGGCGGCCCGGCTTCCAAGGGCAATATCCTCCCCAGCAACCGTTAGGGCCTAGTGGGAATTTTGGTCCTGGGATGAGGGGAAATATGCGGCAGTCGACGCCACCTTACTCGAATCAGGGGCAATATTTCAACGGTGCAGTTCCTGCTCAGTTCCCGCAACACCAAGGCGGGAATGGGCAATACGGGGGGCAGTACGGTGGACAGTTTGCGCAAGAAGTAGCTATGAGGACGAACATGACCTACCAGCATAGTCCTGTTCCTGGGAACCCAACGCCACCGTTAACACCTGCTAGCAGTATGCCGCCTTACATTAGTCCAAACGCTGATGTCAAACCCCATTTTAACGAGCTCAAACCACCGATGAGCCTCCAAAATGATGAACTCCGGTTAACATTCCCTGTAAGAGATGGTATTATATTACCACCTTTTAGATTAGAACATAATTTAGCAGTTAGCAATCATGTATTCCAATTAAAATCCACAGTCCACTCAACGTTAATTTGGAGATCAGATTTAGAGTTGCAACTCAAATGCTTCCACCATGAAGACCGGCAGATGAATACGAACTGGCCGGCGAGTGTGCAAGTGTCAGTGAATGCGACGCCCCTAGTCATAGATAGAGGCGAAAACAAAACGTCACATAAACCTCTGTACCTGAAAGAAGTGTGTCAGCCTGGTAGAAACACGATACAAATTACAGTTTCTGCCTGCTGTtgttCGCATCTATTTGTATTACAATTAGTTCACCGACCGAGCGTTAGGAGCGTTCTGCAAGGATTACTACGAAAGCGGTTGCTCACGGCGGATCACTGCATCGCAAAAATCAAGATGAATTTCAACCAATCACCGTCGAACGCCAACAACGGATCGTCCAATGACAGAGATAGCGTCGAACAAACAGCGTTGAAAGTGTCATTGAAATGTCCAATTACGTTTAAGAAGATAACTCTACCTGCGCGTGGGCACGAATGCAAACACATACAATGTTTCGATTTAGAATCGTATCTGCAACTGAATTGCGAGCGGGGGTCTTGGAGATGTCCTGTTTGCAACAAACCAGCGCAACTCGAAGGCTTAGAAGTAGATCAATACATGTGGGGAATACTGAACACGTTGAATGGTTCTGATGTCGACGAAGTCACAATAGACAGCGGGGCTAATTGGAAGGCCGCTAAGAGCCCTAACAACACCGGTATCAAGCAGGAGGATGACAGTAACGACAACAGTGGAAAGCGAAGTAAGGCTGTGTCGCCTGGATCTATGAACATGCCGACAATGAACAACTGGGACATGAATCAAGCGCTATCCCCCTATCTCCCGCCGGATATGAACACTATCGCCAGCGGGTCAATGATCTCATCTTACAACCAAAGTACGCAGAATAGGAACGCTGGGAACAATCAGAACTATGACTTTGGAATGAACAACGGGCCTGGAAGCAATGAGTTCGCGGGCAACGGAGCGTTGTCGCATCTCAATGAAAGCGTCAATTCCTTGGATCCCCTCAACGCCATGGAGAAGAGCTTGAATGAACAGATGCCTCACACGCCGCACACGCCGCACACGCCCGGGTCCGCGCACACgccgggcggcggcggcacgCCGGGCTCGCACACGCCGGGCCCGCCCTCCGTGTCGCACGACCTCACCGACGTTGACATCCCCCCGGACCTCAACTTCGACCCCGCCGCCGTCATCGACGGAGAGGGCACCGACAATCTCAATCTGCTGCCGGAGACGAACGTGGACCCGATGGAGCTGTTGTCGTATTTAGACGCGCCGGCGCTGGGCGAGCTGCTGGCCACGCCGCCGTCGTCGTCGTCGTCCGCCGGCTCGCACCCGCCGCGGGCGCCCTCCTCTGACGATCTGCTCGCGCTCTTCGAGTAA
- Protein Sequence
- MQQGHRNTSESSSVVQPYPRAKAAGGGGGGWRLAGGERSQRPNTAECRAECRDDDVQVSGGRGGCATYRSELATPHGVGAPRTATSHRPVRRSVAGSLASLPLVVVNTVVAALEDRTANFGAAGYPGISGNYSGASAPGAIKFNPQQGTIGYRVNNPSGYGCAVGAGAMSGGGENAQFGATAAMVAAASTVAMQDSQPFSQMQNNMTMGNPQYSAMNGYGQQRSHNPGMTGMGMGNGGMNGMTGMAQMGNAGMNGMNPMASMANMGMHGNMMPSQMGPGQMGGSAKMGPGYQRRHTPYPQGQMLMTQRKTQYMGGQPNFGPGQYPAGYGGRPGFQGQYPPQQPLGPSGNFGPGMRGNMRQSTPPYSNQGQYFNGAVPAQFPQHQGGNGQYGGQYGGQFAQEVAMRTNMTYQHSPVPGNPTPPLTPASSMPPYISPNADVKPHFNELKPPMSLQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKSTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQSPSNANNGSSNDRDSVEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNGSDVDEVTIDSGANWKAAKSPNNTGIKQEDDSNDNSGKRSKAVSPGSMNMPTMNNWDMNQALSPYLPPDMNTIASGSMISSYNQSTQNRNAGNNQNYDFGMNNGPGSNEFAGNGALSHLNESVNSLDPLNAMEKSLNEQMPHTPHTPHTPGSAHTPGGGGTPGSHTPGPPSVSHDLTDVDIPPDLNFDPAAVIDGEGTDNLNLLPETNVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357101;
- 90% Identity
- -
- 80% Identity
- -