Cnem019294.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Choreutis nemorana
Gene Symbol
ZFY
Assembly
GCA_949316135.1
Location
OX438622.1:903573-907597[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.22 16 6.5 0.8 1 19 103 121 103 124 0.80
2 28 1.6 1.2e+02 3.8 0.5 1 23 155 177 155 177 0.96
3 28 3.9e-05 0.0029 18.4 4.4 1 23 182 204 182 204 0.98
4 28 0.057 4.2 8.4 3.3 2 20 208 226 208 228 0.91
5 28 0.00067 0.05 14.5 1.3 1 23 238 260 238 261 0.96
6 28 0.00064 0.047 14.5 1.6 1 19 267 285 267 289 0.90
7 28 0.0015 0.11 13.4 1.5 1 23 296 318 296 318 0.99
8 28 0.011 0.82 10.6 7.2 3 23 343 366 341 366 0.91
9 28 6.6e-05 0.0049 17.6 1.9 2 21 490 509 489 510 0.93
10 28 0.47 35 5.5 0.4 3 23 516 536 515 536 0.96
11 28 0.0022 0.16 12.9 0.6 3 23 543 564 541 564 0.96
12 28 0.0018 0.13 13.1 0.8 1 23 569 591 569 591 0.98
13 28 0.47 35 5.5 5.0 1 19 594 612 594 612 0.96
14 28 0.00076 0.057 14.3 1.4 1 23 639 662 639 662 0.95
15 28 5.9e-05 0.0044 17.8 2.9 1 23 668 690 668 690 0.98
16 28 5.2 3.9e+02 2.2 0.0 6 23 701 718 700 718 0.92
17 28 0.044 3.3 8.7 0.8 1 23 724 747 724 747 0.94
18 28 8.7 6.5e+02 1.5 2.2 1 15 755 769 755 771 0.84
19 28 8.6e-05 0.0064 17.3 0.2 2 21 872 891 871 892 0.94
20 28 1.9 1.4e+02 3.6 0.1 5 23 901 920 898 920 0.90
21 28 0.0093 0.69 10.9 0.2 1 23 925 948 925 948 0.94
22 28 0.0027 0.2 12.6 2.4 2 23 954 975 953 975 0.86
23 28 0.21 15 6.6 2.9 2 21 979 998 979 999 0.92
24 28 4.7e-06 0.00035 21.2 0.7 1 23 1025 1048 1025 1048 0.95
25 28 0.00019 0.014 16.2 0.5 1 23 1054 1076 1054 1076 0.97
26 28 0.069 5.1 8.1 0.1 1 23 1082 1104 1082 1104 0.98
27 28 0.092 6.8 7.7 0.3 1 23 1110 1133 1110 1133 0.93
28 28 7.4e-05 0.0055 17.5 2.1 1 23 1139 1162 1139 1162 0.96

Sequence Information

Coding Sequence
ATGTCACCATTGCTGCCTGATACCCTTTGTGACAATTGTTCGGAAAGTCTAGAAGCTACCATCCGGTTTATTGAACTCTGCAAGACTTCTAATTTGAAATGGAGGAGGTTTGTCGATCTGGAAGAATGCATAAACCCGCAGAAACATCACGCGGGCGTTGTTGTCGTATCGCAAGGTGATAATATACAAACAATTAATATGAGAAAGCCTTTAGTCCCAAAGACGAAAGCGAACGCGTTGAAGTTTATTAAGCATTCATGCAGAATTAAAACCAGGCATGACGTTCTGAGGGACAGTAAAAAGAACTACCTCTGCCCGCAGTGTCAAAAGACATTTGATAACTTCGCGAAGTTCAACTTTCACGTTAGAGATCTGAAGATGAGGGTATGCGTGTATTGTAAACAAGTAATGGATCTGAGAGACTTTGAAAGGCATGTCAACGAAGTTCACCTAACTCGATGCTACTCATGCACGAGCTGTTCCGATGTTTTTCTAACGAAAGAAGCACTAAGGACTCACGGGAAGCTGCACATGAAAGGCCGATACTTCTGCTACGACTGCAACAGGACGTTTAAAACGTCTGCGCACCTCTCCATCCACCTGAAAAAGCACATGAGCAGGTCCTGCGACGGCTGTCAAAAGAAGTTCACGAACAACGGCTGTTTTAAATACCACAGCAAACTGTGTGACGGTGCAATCAAACCTCGCGTCTACAAATGCGATTACTGCCTAAAAGAGTTCGCCACCAAAGCGGCTATAAAGATCCATATTAACTTCCACCACTTGTGCGTGGAAGTCTTCCAATGCGAGCACTGCGGCAAACGGTTTCCGAACGCGTTCCGCTTGCGCGATCACGATAACGTCCATAATAAGGTATTAGATCGGTACACTTGTCCTATATGCCAGGCGAACTTCCAAACTGAGAGGGGATACAggaaacatacaaaaaaacataagatGAGGAACGAAACGGAACCGTACATTCCCCGGAAACCGGCCACAACAGGACTAACCAGGCGATGCATTTGCGAATGCATAATCTGTCACAAAACCTTCTTCTACAAGAAAAATCTCAAGATCCACTTGATGAAGCAGCACAGCAGTCTCAACTGGGGGGTGGCGGAGGAGAGTGGACTGCCAGCGGGAACGTGCCGAGCTTGCTACGGAGATGCGATCATCGCTGTCCACTTCAAGCAGCTCTTCGACGATTCGACCCTCCAATGGAAACAGGCCATGAACTCCCTCTCCGCCCTTGAATCGCCAGCGGAAGACGACAAAGCCTTTTACGTCTTCTACAACCCAGGCAACGACACCCTGGTCAGAGACAAGACCGATAGGGTGTCGGATACGAAGGAGGTAGCGCGAAGACTCAACGACTCATTGGTAACGCGAAGCTTCAACGACTTCGTCAATTCCGAAgtgaagaagaagaagaaacataaaaaaaggaaacctTGTCTACAGTGCGAGTGCACCAGCTGTGGGAAAACCTTCTATAACccttacaatttaaatttgcatTTGAAGAAAACTATGAATCGTGCTTGCTACCATTGCGGCGTGGTGCTTCAGAGAGATAAATTAGCAAACCACTTAACGACTGTTCACAACGTTTTCTTGTTAGATTGCTACTACTGTAATCAACTTTTCAAAGATGAAGATAAGCTCACTGAGCATTTGCAGACGTACCACACTGATCAGTCGTTCCAGTGTAAGCTATGTGGACTTGGATACGAAAACTTGAGGTCTCTGAGCACGCACCAGTATTCCCATACGCTATTCCACTGCACTGCTTGCGGTAAAGGTTTCGACAATCGCTCGTGCTTCATCCACCACGATCTGACCTGCTCCCAGCATAAAGAAAAGGTTAGGAAGATTCGAAGGAAGATGAGGAAAGAACCCGAGAACTGCTTGTATACTTGCGACCACTGCGGGAATACTTACGACAAGAAACCGTCCTTGAAAATTCACATAATTCAGAAGCATTTAAACGTGTTGCCTTTCGTTTGTAATAAATGCGGGAAGAGAACTTCGACTATCAGCCATTTGAGGTCTCATGAGTCGACACACGCTAAAGAGAGGAAGGTATTTGAATGCGCCTGCGGTGCTAAGCTTCGCACTGAACTGGGTTACCAATTGCACATGAGGATACACACAGGGGAGAAACCTTACGAGTGTCAGGATTGTGGGGAACGGTTCCTTTCGTCTTCTAGGCGATTAGATCATATCAAACGCAGACACAAGAGCTCTGAAGATCTTCCGCACTGCTGCCACAAGTGCCAGGCCCGATTCGTATCAGAGGACGCGTTTTTTCCGATCGGGACATGCGTCTTTTGTGTCAATTCCGTTATCGCCGCTCAAGAGTTTCGTCTTTTGACTCGCAATTCGGATAAAATGTGGAAACACTCGATAGACGCGCTCGAAGGCTTACAGCGCTTAACATGTACGCAAGCTAAATCAGTCTGTGCTGTATTAACAGACCAGTTCACATTGAAAATCATTGAAGACCACAGCGGCGTCGGCGTCGCAACCACACTCAACAACCTCAAGATAAAAGTCCCAGCGAAAAAGACGAAGAAAAAGAAACGCTTCCCAAGAACTGGGCCTTCATCCACCTGTCCAGACTGCGGCAAAGAATTCATGAGCCCCTACTATTTGCACGCACATCTGAAGAACAGCGGGCAGAAGGAAGCTTGCATAACTTGTGGCGAGATTTTCATTCGAGGGGAGCAAATGAGGGACCACTTGATACAGAGACACAGACAAAACGCGTTCCTTTGCAAAGAATGTCCGTCCGTATTTACCAAAGAGGTTGAGTTTAACAGCCACGTTCGGGAAGCCCACAAACCTGGAGCGTTGACTTGCTCGCATTGCGGTAGAACATTCACGAGACTTTCGTCTTTGGACTTCCATTCACAGATGCACGCAGTGAGGACATGCAGGTCGTGCGGGCGGCAGTTCTCTAATAGAGGCTGCTACCGTGAACACAGGTCCCGATGCGAACCTGACGCTAAACCTGTCACCAAAAACCTACCGAGAAATCGTCGCTCAAACATCCGGGACCCCGCCACTTATACTTGCGACTACTGCAACAAAACCTATAAATCCAGACCGCAATTAAAGAACCACATAATCTGGATCCACATGGACGTACGCCCTCACCAGTGCCAGTGGTGTGGCAAAAGGTTCTACACGCCAGCCAGATTGGCAGAGCATACGATCGTCCATACAAGGGAGAGGAACTTCGAATGTGATATATGCGGAGCTAAATTAGTCACTAAAATGGCCGCCGTGTATCACAGGCGGAGGCATACCGGGGAGAAACCTTACGAATGCGACGACTGCGGGGATACCTTCATATCTGCTTCGCGGAGATCGGAACATGCGAAGAGAAAACACGGGAAAGGCCGAAGATTCCAATGTCCACACTGCCCCCTCAGCTTCGTACGAGGGCACGAACTGAGGAAACACACGGAAAAAGCCCATAAAGACCCTGAGAAGAAGGTGGAAGATGATTTGGTGCGTCTCGGGGAGTCCAAACAGTGGGTTAAAGCAGAGAACGTGGTCAAAGACAGCTTCGAAAATATACTCATTACCTCATga
Protein Sequence
MSPLLPDTLCDNCSESLEATIRFIELCKTSNLKWRRFVDLEECINPQKHHAGVVVVSQGDNIQTINMRKPLVPKTKANALKFIKHSCRIKTRHDVLRDSKKNYLCPQCQKTFDNFAKFNFHVRDLKMRVCVYCKQVMDLRDFERHVNEVHLTRCYSCTSCSDVFLTKEALRTHGKLHMKGRYFCYDCNRTFKTSAHLSIHLKKHMSRSCDGCQKKFTNNGCFKYHSKLCDGAIKPRVYKCDYCLKEFATKAAIKIHINFHHLCVEVFQCEHCGKRFPNAFRLRDHDNVHNKVLDRYTCPICQANFQTERGYRKHTKKHKMRNETEPYIPRKPATTGLTRRCICECIICHKTFFYKKNLKIHLMKQHSSLNWGVAEESGLPAGTCRACYGDAIIAVHFKQLFDDSTLQWKQAMNSLSALESPAEDDKAFYVFYNPGNDTLVRDKTDRVSDTKEVARRLNDSLVTRSFNDFVNSEVKKKKKHKKRKPCLQCECTSCGKTFYNPYNLNLHLKKTMNRACYHCGVVLQRDKLANHLTTVHNVFLLDCYYCNQLFKDEDKLTEHLQTYHTDQSFQCKLCGLGYENLRSLSTHQYSHTLFHCTACGKGFDNRSCFIHHDLTCSQHKEKVRKIRRKMRKEPENCLYTCDHCGNTYDKKPSLKIHIIQKHLNVLPFVCNKCGKRTSTISHLRSHESTHAKERKVFECACGAKLRTELGYQLHMRIHTGEKPYECQDCGERFLSSSRRLDHIKRRHKSSEDLPHCCHKCQARFVSEDAFFPIGTCVFCVNSVIAAQEFRLLTRNSDKMWKHSIDALEGLQRLTCTQAKSVCAVLTDQFTLKIIEDHSGVGVATTLNNLKIKVPAKKTKKKKRFPRTGPSSTCPDCGKEFMSPYYLHAHLKNSGQKEACITCGEIFIRGEQMRDHLIQRHRQNAFLCKECPSVFTKEVEFNSHVREAHKPGALTCSHCGRTFTRLSSLDFHSQMHAVRTCRSCGRQFSNRGCYREHRSRCEPDAKPVTKNLPRNRRSNIRDPATYTCDYCNKTYKSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTIVHTRERNFECDICGAKLVTKMAAVYHRRRHTGEKPYECDDCGDTFISASRRSEHAKRKHGKGRRFQCPHCPLSFVRGHELRKHTEKAHKDPEKKVEDDLVRLGESKQWVKAENVVKDSFENILITS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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