Basic Information

Insect: Choreutis nemorana
Gene Symbol: -
Assembly: GCA_949316135.1
Location: OX438606.1:6599699-6610076[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.68 1.1e+03 0.2 0.1 19 26 431 438 423 442 0.88

2 18 6 9.4e+03 -2.9 0.0 18 28 458 468 454 476 0.80

3 18 0.081 1.3e+02 3.1 1.0 18 30 504 517 496 526 0.75

4 18 0.0028 4.4 7.8 2.7 6 37 521 552 519 553 0.73

5 18 0.024 38 4.8 2.8 5 34 548 573 546 587 0.81

6 18 0.0028 4.5 7.8 4.9 18 38 588 609 576 613 0.89

7 18 0.088 1.4e+02 3.0 2.9 13 31 611 629 604 637 0.71

8 18 0.022 35 4.9 2.9 6 33 629 660 627 666 0.71

9 18 0.017 27 5.3 5.3 5 38 660 693 657 694 0.77

10 18 0.0014 2.2 8.8 1.2 5 38 688 721 685 728 0.85

11 18 0.025 39 4.8 5.9 8 38 719 749 714 756 0.81

12 18 0.08 1.3e+02 3.1 5.0 17 38 755 777 745 784 0.81

13 18 0.0029 4.5 7.7 4.0 11 38 778 805 772 811 0.83

14 18 0.0037 5.8 7.4 2.6 18 38 812 833 806 834 0.83

15 18 0.0019 3 8.3 3.0 5 33 828 856 826 862 0.80

16 18 0.048 75 3.8 1.9 14 33 864 884 856 890 0.75

17 18 0.00033 0.52 10.8 4.3 6 38 885 917 884 918 0.85

18 18 0.023 37 4.8 1.3 19 38 925 945 919 952 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.68	1.1e+03	0.2	0.1	19	26	431	438	423	442	0.88
2	18	6	9.4e+03	-2.9	0.0	18	28	458	468	454	476	0.80
3	18	0.081	1.3e+02	3.1	1.0	18	30	504	517	496	526	0.75
4	18	0.0028	4.4	7.8	2.7	6	37	521	552	519	553	0.73
5	18	0.024	38	4.8	2.8	5	34	548	573	546	587	0.81
6	18	0.0028	4.5	7.8	4.9	18	38	588	609	576	613	0.89
7	18	0.088	1.4e+02	3.0	2.9	13	31	611	629	604	637	0.71
8	18	0.022	35	4.9	2.9	6	33	629	660	627	666	0.71
9	18	0.017	27	5.3	5.3	5	38	660	693	657	694	0.77
10	18	0.0014	2.2	8.8	1.2	5	38	688	721	685	728	0.85
11	18	0.025	39	4.8	5.9	8	38	719	749	714	756	0.81
12	18	0.08	1.3e+02	3.1	5.0	17	38	755	777	745	784	0.81
13	18	0.0029	4.5	7.7	4.0	11	38	778	805	772	811	0.83
14	18	0.0037	5.8	7.4	2.6	18	38	812	833	806	834	0.83
15	18	0.0019	3	8.3	3.0	5	33	828	856	826	862	0.80
16	18	0.048	75	3.8	1.9	14	33	864	884	856	890	0.75
17	18	0.00033	0.52	10.8	4.3	6	38	885	917	884	918	0.85
18	18	0.023	37	4.8	1.3	19	38	925	945	919	952	0.93

Sequence Information

Coding Sequence: ATGAATCCAGAACACCATAATCTCAACACGGGTGGTGGCCAGCCCCCTGGAAACTCGGAGAGTCAAACTCAAAGAGTGCAGCCTGGCCAGCAATCACAGCAGGCAAATAATTTACCCGTGACAACGTCGGCCACAGATCTTCGGGTCAATTCAGCTGCAGTAAATGTCGCTTTGTCGAGCGTTGCCAAATACTGGGTGTTTACAAACCTATTCCCTGGACCGATACCACAAGTGTCGGTCTATGGACTACCAACTGGAGCTAGAATCGAGAATGGGAAACCAGTtcaggAGATTGGACAGGGTCATGGTAATATCCTGAATGGAGACCCAAACATCATTTTGGGTCAAACTGGCCACCCACAAGTCACTATATCTGGCCCTGGTGGTCAGCAAATACCAGTGACTCAGATAATTGCTGCACAATCTGGACAAAATCATGAAGGACTTGTTGCTCATAACCAGCAGCAACAGCAGGAGCTTAGCCAGCAGCAAGGGACAAGCAGTGGTCAGGTCTCCATACAAGGAGGACAAACCACTCACCAGCAGGTACCCAATAATCGGGTGGAGTTTGTCCAACACCATAACATTGATATGGTAAATGAAGTGACTCATCACTCCCAACAACACAACATTCTTCAGCAACAGTTGATGGGCACTTCAAGGCCGGAACATGGGAATCAACagATCCAGTTGACTGTGAGTGAAGATGGCATAGTGACAGTGGTGGAACCTGGTGGAGGTAAGCTGGTGGACAAAGAAGAGCTTCATGAAGCCATTAAAATGCCTAATGATCATACTCTTACTGTCCACCAGCTACAGCAGATAGTTGGACAACAGGTGATAGACAGTGTGGTACGAATTGAACAGGCAACTGGTGAACCTGCAAACATCCTAGTAACACATAATCCTGATGGGACTACTTCCATAGAGGCCAGTGCTAACGAGTCCCTGATGGTTAAAGATGAGAAAGTAAATGCTAAGATAGAGACCGCACAGTTTGCTATACCTACAGATATTAAGGATCTCAAAGGCATTGATTTGAAGAGTGTTGGTACTATGGGCATGGAAGGTGCAGTAGTAAAGATATCAGCAAGTTCAGAACATGATCTCCATGGGATGTATAAAGTTAATGTTGAAGACCTGTCTCAGCTGCTGGCATACCACGAAGTTTTCGGAAAACTTAATTCTGATGGACAGCCTCAagcaaaaGTGATAAGTGAGGTAGAAGTTGATGTCCCCGGTCCAAGCGCCGCTATTACTGAATCGGAGACCTCTCCGGGACATCACGCCTGCGACATATGTGGAAAGATATTCCAATTCCGTTACCAACTTATAGTGCACAGacGTTATCACGGAGAGCGTAAGCCATATACGTGTCTAGTGTGTGGTTCAGCATTTGCAAATCCTGTGGAGCTGTCAAGACACGGAAAGTGTCATGttactacaacaacaacaacgcAAGCAGTAGAGCCCAGACCAGAGAAGCGGCTCGCACCCGACAAGCCGTACGCATGCACCACATGCCATAAAACATTTGCTAGAAAGGAACATCTCGACAACCATGTCAGAAGTCATACTGGAGAAACGCCATAtagGTGTCAATACTGCGCCAAAACATTCACCCGCAAAGAGCACATGGTGAACCATGTGAGAAAACACACGGGTGAAACTCCACACAGATGTGATATCTGCAAGAAAAGCTTTACAAGGAAAGAACATTTCATGAACCATGTTATGTGGCATACTGGTGAAACACCTCATCATTGTCAATTATGCGGGAAGAAGTATACTAGAAAGGAGCATTTAGTGAACCATATGAGGTCGCATACGAACGACTCCCCGTTCCGATGCGACCTTTGTGGAAAATCTTTCACAAGAAAAGAACACTTCTCCAACCACATACTATGGCACACTGGTGAGACCCCCCACCGCTGTGACTTTTGTTCTAAAACCTTCACCCGTAAGGAGCACCTACTGAACCACGTGCGCCAGCATACTGGTGAATCCCCGCACCGCTGTAATTACTGCTCCAAGTCTTTCACGAGGAGAGAACATCTCGTTAACCATGTGCGTCAACATACCGGTGAAACGCCCTTCCAGTGTGGATACTGCCCGAAAGCTTTCACAAGGAAGGATCATCTAGtAAACCACGTCCGCCAGCACACTGGTGAATCCCCGCATAAATGTTCGTATTGCACAAAGTCGTTCACGAGGAAGGAACATCTAACCAATCACGTGCGGCAACACACCGGAGAGTCCCCGCATCGGTGTACATACTGCGCTAAGTCATTCACTAGGAAAGAACATCTAGTTAATCACATACGACAACACACCGGCGAAACGCCCCACAAATGTTCGTATTGCCCGAAAGCGTTCTCTCGCAAGGAGCACCTCACGAACCACATACGCCAGCACACAGGTGATACGCCACACACATGCTCTTACTGCAACAAGAGCTTCTCAAGGAAAGAGCATCTCGTCAACCACGTGCGTCAACACACTGGGGAGACTCCATTCAAATGCTCCTACTGTTCAAAAGCGTTCTCTCGCAAGGAGCATCTGACTAATCACACACACCTACACACTGGTGAAACACCGCACAAGTGTCCATTCTGCACGAAAATGTTCTCTAGAAAGGAACATCTCACCAATCATGTCAGGATACATACGGGCGAATCTCCCCATCGATGCGAGTTCTGCCAGAAGACTTTCACCCGAAAGGAGCATCTAACTAACCATTTGAAACAGCATACCGGAGATACGCCTCACGCTTGCAAAGTGTGCGCCAAACCTTTCACCAGGAAGGAACATCTGGTCACGCATATGAGATCGCACAGTTGTGGAGAGCGTCCACATAGCTGCAGTGAGTGTGGCAAATCCTTCCCGTTGAAAGGGAACTTGCTGTTCCACGAGCGCTCCCACGCCAAGTTCAAGCATCAACGCGCTCAAGGGCAAGCCGCTGAAACAGCCCCCGAGACCAATGAAGAGTGCGCCGACGGGAACAAGTGTGAAAAGGAAGAAGAAAGGGTCGAAAGGAAACCTGACGTCAGtcgGATTCAAATAGAAAATGGGCCGACAGAAAATGCTGTGCCCCAAAATCAACAGGCAAATGCGACCGCAATGCAAGTCACAAGTCAACAAGTTCGAACAGTAGCAGTGACAAGTGCTGCAGTGACGGGCACGTTTACTCACGCGGCCAGTACCATCGCCCACCATCCCGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHNLNTGGGQPPGNSESQTQRVQPGQQSQQANNLPVTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQEIGQGHGNILNGDPNIILGQTGHPQVTISGPGGQQIPVTQIIAAQSGQNHEGLVAHNQQQQQELSQQQGTSSGQVSIQGGQTTHQQVPNNRVEFVQHHNIDMVNEVTHHSQQHNILQQQLMGTSRPEHGNQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASANESLMVKDEKVNAKIETAQFAIPTDIKDLKGIDLKSVGTMGMEGAVVKISASSEHDLHGMYKVNVEDLSQLLAYHEVFGKLNSDGQPQAKVISEVEVDVPGPSAAITESETSPGHHACDICGKIFQFRYQLIVHRRYHGERKPYTCLVCGSAFANPVELSRHGKCHVTTTTTTQAVEPRPEKRLAPDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQLCGKKYTRKEHLVNHMRSHTNDSPFRCDLCGKSFTRKEHFSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLVNHIRQHTGETPHKCSYCPKAFSRKEHLTNHIRQHTGDTPHTCSYCNKSFSRKEHLVNHVRQHTGETPFKCSYCSKAFSRKEHLTNHTHLHTGETPHKCPFCTKMFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCAKPFTRKEHLVTHMRSHSCGERPHSCSECGKSFPLKGNLLFHERSHAKFKHQRAQGQAAETAPETNEECADGNKCEKEEERVERKPDVSRIQIENGPTENAVPQNQQANATAMQVTSQQVRTVAVTSAAVTGTFTHAASTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00323671;
90% Identity: iTF_00323671;
80% Identity: iTF_00323671;