Cnem001969.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- CSRNP3
- Assembly
- GCA_949316135.1
- Location
- OX438596.1:8789854-8792076[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.19 4.5e+03 -2.3 3.5 60 101 22 70 6 97 0.44 2 3 3.7e-101 8.8e-97 323.7 8.0 2 218 212 420 211 420 0.93 3 3 0.38 9.1e+03 -3.3 3.1 43 85 606 649 578 714 0.53
Sequence Information
- Coding Sequence
- ATGGAAACTACAACCCCAGATTCAGTCGAAAGTCAAGACCTTCAGTTATCCtgcaataacaaaaataaagaaatggaATCATCGTCGGATACAAAAAacgaaaacattaaatattgcGACGAAAATAGTGCGGACCTAAGCTCTAATGAGGAACaaagtaatgaaataagtAACAGCGGCTCTCAGTTTTATGAGAGCAGTGATAGTAAATTAGATTTTGCTGTAAAAATAGATGATAATGATACTTTAAGTGATATTGATGACATTAAAACTGACACCGCGTCTGCTGATAGTGAAGACTCAGCTCTTGGCAGTCTGCCACCCGATAACGTAAGCGTTGAAAGAGACGAAGAAGCACAAGACAGATCCGATGGAAGTGATTCAGGGCTAGGATCGGAAACCACCGAAGACGTTAAGATCCCAAGCTTTAATTTGGACCTTCCTTGTACAACTGGTTTAAACAAAGAATCATCAAATGATTTAGAGCCAACAACCTCTGACCAAAACGTCAATTTAATCGAAGCAAAGCAAAAAGATGGAGAGATTTCTAACTCCATTGCTGAACGGCCAAGTAAAAGTAGCCTCAAACGGAAATTAAGTGAAGATGACAAAGATGAGCCagaatttaaaagaaaaaagaaatctatacaattcaataatatcacagtattttattttcctagGGCACAAGGCTTTTCGTGCGTACCTTCCCAAGGGGGATCAACTTTAGGAATGGAGTGGCAGCACACGCatgttcaaaattttactttaacgGAACATGCATTGGAACAGAGACGGTTGCACAGACAAATCTTACAACAGCTAAAAAACGAGCGTCATGCTATACAAGGCGCAGCTTTATCATCAAGTGAAGAAAGTGATACTGAAGAAGAAGCTAGTGACATTTCAGAATCCGAATTAGATTTAGatagttattattttcttcagCCCGTTCCGACAAGACAAAGGAGAGCATTATTACGAGCTGCCGGTGTTCGTAAAATCGAAGGTTACGAAAAAGATGAATGTAGAGATATAAGAACATCACGAGAATTTTGTGGTTGTGCTTGTAAAGGTGTTTGCAATCCAAATACTTGCTCATGTAGCCTTGCGGGAATAAAATGTCAAGTTGATAGATTAAGTTTTCCCTGTGGTTGCACAAGAGACGGTTGTTGTAACGTAACAGGAAGAATAGAATTCAATCCGATAAGAGTGAGAACTCACTTTATTAATACGCTCATGAGATTAGgtttagaaaagaaaaatgaagAAAGTCAAGAAGCTGCAAAAAGGCAATGGGCTGAAGCTCATAGTGCCAATACGTCAACATGCCTTCAAAGCACGACGTACGCAAGAGATCATACCCAGGGACGTGACGATAGCTTATTGCGAGACGTAAATTTAACTCCGAGGATAGAGGTAGAGTCTTGTGTTAATGCTGGAAGTTATAACAATGTCCATTGCGATATGAACGCTGCTATCCAAAACAATATGCGGCAAACTGATATGTCGTATGGGTATAGAAGTGATGACGTAACGCAAAGacaacaaaatgaaaataatgttatgcATTACAATGCTATGAATAATAGCAACCACGCTGATCCCTACACTTCTAACATATTGCAAGGGAAAGGCCCGCCATATTCAGCGGCCAACACAATGGGGTATGAAACTATGTCAAATAATGTTCTAAGATTTTCATGCGATCTCAATTACGGATACGGTCAACATTCAGATAATAATCATCACTACAAAAGTCTACAAAGTTTTTCGGCTTCCAGTTTTGAAGAGTTTGCTCATAACTCGCATATGTCTATGTTCAGTCATTATGGTCATATGTACAATTCAGAATACATGCAAAAGTCGAATACAAACGTTCAAACAATAGATCACAATTCCCAACAGTACCATGTGATGCCTCAAAACCATTACGACATGTACAAAACTACTGCAGAGAATGTTCCTAATGAAAACAATTCACAATTTTCTAATGTAATGACTATTCCATATCAACCTAGCAATAAGTTACAAAATGTAGACAGTAACGAGAATTGGTTTAGTCAGAACTCTTTAATAAGTTTGGAACACTCCGACCAAACCACGCAGGACGCATCTGAATTGCAGACTGCAGCGGAAACTCCGGCTGAGGAACCAACGGAGCCAACCGAAAACTTTGGAGAGCTCATAAAGAATACTATGGTAGAATCCGTTACTGTGTAG
- Protein Sequence
- METTTPDSVESQDLQLSCNNKNKEMESSSDTKNENIKYCDENSADLSSNEEQSNEISNSGSQFYESSDSKLDFAVKIDDNDTLSDIDDIKTDTASADSEDSALGSLPPDNVSVERDEEAQDRSDGSDSGLGSETTEDVKIPSFNLDLPCTTGLNKESSNDLEPTTSDQNVNLIEAKQKDGEISNSIAERPSKSSLKRKLSEDDKDEPEFKRKKKSIQFNNITVFYFPRAQGFSCVPSQGGSTLGMEWQHTHVQNFTLTEHALEQRRLHRQILQQLKNERHAIQGAALSSSEESDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPNTCSCSLAGIKCQVDRLSFPCGCTRDGCCNVTGRIEFNPIRVRTHFINTLMRLGLEKKNEESQEAAKRQWAEAHSANTSTCLQSTTYARDHTQGRDDSLLRDVNLTPRIEVESCVNAGSYNNVHCDMNAAIQNNMRQTDMSYGYRSDDVTQRQQNENNVMHYNAMNNSNHADPYTSNILQGKGPPYSAANTMGYETMSNNVLRFSCDLNYGYGQHSDNNHHYKSLQSFSASSFEEFAHNSHMSMFSHYGHMYNSEYMQKSNTNVQTIDHNSQQYHVMPQNHYDMYKTTAENVPNENNSQFSNVMTIPYQPSNKLQNVDSNENWFSQNSLISLEHSDQTTQDASELQTAAETPAEEPTEPTENFGELIKNTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -