Cnem004120.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- F54F2.9
- Assembly
- GCA_949316135.1
- Location
- OX438599.1:1973358-1979036[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.3 8.3e+03 -2.6 0.0 11 42 24 55 19 58 0.61 2 3 7.9e-07 0.00089 19.7 0.0 2 38 292 331 291 339 0.85 3 3 9.6e-09 1.1e-05 25.8 0.1 2 43 372 418 371 420 0.85
Sequence Information
- Coding Sequence
- ATGGGTCTGAGACTTTtggtagttttatttttagtagcAAGCGTTACAGCTTGGGACGACGACGATCTAGAAGTGTTTGATGTTGTCGAAGAAGTTAACCAGAATTTTTACGAATTACTTGGTGTTACTCAGGATGCTACACCAGCACAAATCAAGTCAGCGTTTAAGAAGTTGACCCTGAAGCTTCACCCGGACAAGAATGATTCTCCGGATGCTGATGTACAGTTCAGGAACCTCGTCTCCGTACATAATGTTCTCAAGGATCCAGGGAAACGAGAGAAGTATAATGAGGTTCTGAAGAATGGTCTACCAAACTGGAGATCAGCAGTGTACTACTACAGGCATGTGAGAAAGATGGGCCTGGCAGAGGGATCCCTGATCCTGTTTATAATCATCACATTCGGTCAGTATGCTGTTGGATGGGCAGCGTATGCGGAGAAAAAATATACTGCTGAACAAATCCTGAACAGTAGAGGCAAGAAGCACTTTAAGAAGTCAGGATTTGACACCGGATTAGCGGAGTTATTAGATCAGTTACCAAGACCCAGCATCAAGGACACCCTGCCCTTCCAAATACCCAGGCTCCTCTGGTGGTCCATCACAGCAATACCTCGAGGAATTCAAGAGTATAAGAGAAGGGCCGAAGAGCAGAAAGCTGAggaaattaaacttaaaaagaaGGAGGAAGAAGAGCGGTTGAGGTTGGAGCGCGAGCTGGAAGCAGCGAAGGCGTTCAAGGCAGCcggcgtgcggcggcggcgcgggttCGTGCCGCCGGAGCGGGAGGGCTGTCTGCTGGATGCTGCTGATGAACCTGATGCCAGTGGCGCTGACAGACCTGTTGCGCATGCACCACCACCAATAGTATCCGGTGGTCTTTGGACAGACGATGATCTAGCTGAACTGGTGCGACTGGTGAAGAAGTACCCACCAGGCAGCGCCGATCGCTGGGAGAGGATCGCGGAGTCCATGATGAGGAGCGTCACTGAAGTCACGCATATGGCACACAAGCTAAAGGAGAACTGCTACAAGCTACCGGGGCAGGAAGCAAACGAGCCCATCCCTGAACCACCTAAGAAGGTGAAAACCCGTAAGCCTGAGGAGGTATCAGCGGGCAACTGGTCCCAGACTCAGCAGAAGGCGCTGGAGGGCGCATTAGCCAAATTCCCCAAAGGCGGCGCTGGAGATCGATGGCAGAAAATAGCCAACACTGTACCGGGGAAAACCAAAgaGGAATGCATGCAgagatgtaaatatttatcagaCATGGTGAGAAAACAGAAGCAGAAAGAAGAAGAACAGAACGAAAGCGAAGCAGCTGCCAACGGACCGCTGGACAGCAATAACAGTATAGAGAACGAAACGTGa
- Protein Sequence
- MGLRLLVVLFLVASVTAWDDDDLEVFDVVEEVNQNFYELLGVTQDATPAQIKSAFKKLTLKLHPDKNDSPDADVQFRNLVSVHNVLKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSLILFIIITFGQYAVGWAAYAEKKYTAEQILNSRGKKHFKKSGFDTGLAELLDQLPRPSIKDTLPFQIPRLLWWSITAIPRGIQEYKRRAEEQKAEEIKLKKKEEEERLRLERELEAAKAFKAAGVRRRRGFVPPEREGCLLDAADEPDASGADRPVAHAPPPIVSGGLWTDDDLAELVRLVKKYPPGSADRWERIAESMMRSVTEVTHMAHKLKENCYKLPGQEANEPIPEPPKKVKTRKPEEVSAGNWSQTQQKALEGALAKFPKGGAGDRWQKIANTVPGKTKEECMQRCKYLSDMVRKQKQKEEEQNESEAAANGPLDSNNSIENET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -