Cnem011612.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- kn
- Assembly
- GCA_949316135.1
- Location
- OX438609.1:3799833-3840163[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.3e-72 7.4e-68 229.6 0.0 11 158 181 318 172 319 0.94 2 4 1.1e-141 1.3e-137 460.0 0.0 182 387 319 542 319 547 0.99 3 4 1.9e-08 0.00023 20.0 0.6 420 467 551 600 543 610 0.85 4 4 0.58 6.8e+03 -4.7 3.3 451 520 633 703 617 713 0.64
Sequence Information
- Coding Sequence
- ATGCTGTGCGACTCATCTCTCCGCCATCCCTTACCCTCGCGCGGTCTCAAAGGGAAACCTTACAACAGGCTATTACAATTCAAAGCAACGAGgtCGGAAGAAAGTGGCGCCCCCTTCGTCAGTCGCGCCGTCCCGCTCGTGAGGCGAGGGCGTGTCCCCAGGGCGCCTCCCACAGTCCGCGGGGACGGAAGGGGCGCAGGCCTGCCGGGGCACTCGGTGGCGCGCTCCCGCGACGCTTGTCTATACGAACGGGAGTGTTTTTGGAAGTACTGTATTTCCCGTTGGTGCGTTTCCGCGCAGTGTCGCGTTCTTGCGGTGGTCGCGGCACGGTTCGCGATTCGGTCGGACGAGTTGaacgcggcggcgggcgggtACACCGGCTCGCCGTGGCCGCCGCTAGAACTGGACCCAACGGGGCTGGGATGGGGACGGAAACTCTACCCGCCGGGAGCGCCCAGGTCTTCAGGCGGACTGATGTTTGGCCTGCATCACCAAGAGGCGGCTGGGGGACTGCACGCTCAGCCGAGGGGCCCTGTCACCTCACTGAAAGAGGAGCCCCTCACGAGGGCCTGGATGACTCCGACATCCCTAGTTGACAATACTAACAGCGTGGGCGTGGGGCGGGCTCACTTCGAGAAGCAGCCTCCCAGTAACCTGCGCAAGAGCAACTTCTTCCATTTCGTGGTAGCTCTATACGATAGAGCGGGACAACCTGTCGAAATCGAAAGGACCGCCTTCATCGGATTCATCGAAAAAGATCAGGAAGCTGAAGGTCAAAAAACCAACAACGGCATTCAGTACAGGCTACAACTTTTATATGCAAAtggtatcCGTCaggaacaagatatttttgtcCGATTAATTGATTCAGTCACAAAACAgcCCATCGTTTATGAAGGTCAAGATAAGAACCCAGAAATGTGCAGAGTATTATTAACACATGAAGTTATGTGCAGgtttttcctcaaattctTCCTAAAATGTAATCAGAACTGTTTGAAGAATGCCGGCAATCCAAGAGATATGAGAAGGTTCCAAgtaGTTATATCGACGCAAGTGATGGTGGACGGACCTCTTCTAGCAATATCGGATAATATGTTCGTACATAACAACAGCAAACACGGGCGGCGGGCGAAACGACTCGACCCTACTGAAGGTATTGAAGCAGCGCCCGAACCTAATTCGGGTCTCTACCCACCCCTACCAGTGGCGACTCCATGCATAAAGGCGATATCACCCAGCGAAGGATGGACGTCTGGCGGTTCAACAGTTATCATAGTAGGGGACAATTTTTTCGACGGACTCCAAGTTGTATTTGGAACCATGCTAGTATGGAGTGAGttaatCACTTCACATGCTATACGAGTACAAACACCTCCAAGGCACATCCCAGGTGTTGTTGAAGTGACGCTTTCGTATAAAAGCAAGCAGTTCTGCAAAGGAGCGCCTGGCCggtttgtttatgtttCAGCGCTCAACGAACCAACGATAGATTACGGCTTCCAAAGGTTGCAGAAGTTGATACCTAGACATCCTGGTGACCCAGAGAAGCTACCCAAAGAAATCATATTGAAGCGAGCAGCAGACCTAGCAGAAGCCCTGTACTCTATGCCTCGTAACAACCAGCTTGGTTTGGGAGCGCCGAGGTCGCCCCCTGCGAGTATGCCCTTCAACTCTTACACGGGACAACTAGCTGTCAGCGTGCAGGATACCGCTGGCTCGCAGTGGACTGAAGAAGAGTACGCGCGGAGCGGCGGCAGCGTGTCCCCGCGGTACTGCTCGGCCGCGTCCACGCCGCACGCGCCCGCCTCCTACCCGCACCCGCAGCACTACCCCGCGCCGCCGACCTCGCTCTTCAATACAAGCTCTCTGTCCCTCGGTCCCTACCACCCTGCCAACGTCGGACATTTATCTGACCATCACTATAACGCGTATAACACGAAAGATAGCGGGCATTATGAAAGGAATGAGAATTCTAAAGAATGTCCGTCAAACACTTATTCGAAATGCAGCGCCGAGTCTGTGAATGGGTCAAAAGAGGGAATGGGCGGCCTCGTATCCTCACCGTTCAGTGTGAATCCGTTTTCGTTGCCGACATGCAGTGCCCAGCAGTACGCGCAAACAGCGCCTCTCGCCTCTAAGTAA
- Protein Sequence
- MLCDSSLRHPLPSRGLKGKPYNRLLQFKATRSEESGAPFVSRAVPLVRRGRVPRAPPTVRGDGRGAGLPGHSVARSRDACLYERECFWKYCISRWCVSAQCRVLAVVAARFAIRSDELNAAAGGYTGSPWPPLELDPTGLGWGRKLYPPGAPRSSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIEAAPEPNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAGSQWTEEEYARSGGSVSPRYCSAASTPHAPASYPHPQHYPAPPTSLFNTSSLSLGPYHPANVGHLSDHHYNAYNTKDSGHYERNENSKECPSNTYSKCSAESVNGSKEGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959956;
- 90% Identity
- -
- 80% Identity
- -