Cnem010021.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- KDM5A
- Assembly
- GCA_949316135.1
- Location
- OX438607.1:937179-940094[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-12 3.9e-09 37.2 0.0 36 89 194 244 190 244 0.91
Sequence Information
- Coding Sequence
- ATGTGgcccataaaaaaaaaaaagcctgATGGCGCGGTCGCTGGCCACCGAGAGCATCCTGTCCATGGTGGACTGCGAGTACCTGCTGGACACGCTGTCGCTGAACCAGCGCCTGCCGCGGCCATCGCCCCCGCACAAGGCCGCCGCCGTCGCCGTCGCCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTTGCGCATCGTCAACGCGCCTGTCTTCTATCCCACCGCCGACGAGCTTCCTACCGCTGCTGCCACTTCGACTCTTGTTCTtcgatgtttattttattcacattttgcaggatccgatagcttatttcgagaagattatggtgaaagctgatcagttcgcaatttgcaaaattgtagCTCCGAAAGGTTTCAAACCCGCTTGCACTCTCGACGGCATGGACAGGTTCAACGTCATGAACCAATACATAGTGAGGCTATACAACAGGTGGGGGCCGGCGGCGAGGGAGATGTGTGCCACGAAGGCCCATCTATCGTCACAGAGCGTTATTTTCTCGAAGGCACCATTGCTGTTTAACTTGGTGCAGCAGCAAGGTGGTCTCAAGAGAGTGATGGAGAAGAAGCGATGGGGTCGCATTGCAGAAGAAATGCGCTGCACCAAACTGTCCAACCCGGAAAAGAAATTTGATcagatatatgtcaaatatttgctgccttacgacacaatgtctagccGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAACACGGGAGATTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTACTGGAAGATGGTGATGCTTGGCACTGAACACATCTGCGTCAACTCGGCGTCCATTGACACCGGGGAACAGGGGTACGGCTTCACTACGAACGAAGCAGACTCCATGTCCAAACACCCCTGGAACCAAAAGgtaatgagtaagaacaaagccaacatgctgcggttcatgggtcccgtagttggcgtgaccgtcccgacgttgcatctcggcatgctgttctctagcagctgctggcaccgagacccgcacggcctgccctgggtcgagtacatgcacaatggaccaagcaagatatggtatggaatccccgatgtcaatagtcaggcattcagaaaagcagtagaaacgcTGTGCCCGTCGTTCtgcctcaataaaacagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcactctgtgtaggctcgagcagaatccaggcgaGTCATATTAA
- Protein Sequence
- MWPIKKKKPDGAVAGHREHPVHGGLRVPAGHAVAEPAPAAAIAPAQGRRRRRRRRLRHRSTARRRRPRPSPTASTPRACASSTRLSSIPPPTSFLPLLPLRLLFFDVYFIHILQDPIAYFEKIMVKADQFAICKIVAPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCATKAHLSSQSVIFSKAPLLFNLVQQQGGLKRVMEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMSSRERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEHGRFMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEADSMSKHPWNQKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSSSCWHRDPHGLPWVEYMHNGPSKIWYGIPDVNSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVTLCRLEQNPGESY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323277;
- 90% Identity
- iTF_00323276;
- 80% Identity
- iTF_00323276;