Cnem000068.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Choreutis nemorana
Gene Symbol
PRP4K
Assembly
GCA_949316135.1
Location
CASGFM010000033.1:12412-28343[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-16 2.8e-13 50.4 0.0 17 89 576 645 567 645 0.85

Sequence Information

Coding Sequence
ATGGACAGTCCAAGACGTTGTCAAAAACAGACATGGGCACAGCGTAAATTCGCTCAAGGATACCAGCCACCCGTTGGGACTGGCAGCCACAACAACACAACAACCACCAGAGATGAACAAACCCTACTCGATATAAGACCCCCCAAAACCGTCAAACATGCCATGAGTGCAATAGAATTATTGGACTTAGTGtcttttaaaaATCTTCACCAACATTATGTACAACCAGTAGTGGTGCTGGAACGTATGAAGTCGAAAGCCGACGCAATAGAACCACATCGAAAAAAAGTTCATAgagataaagatattaaaaagcaCAACACAAGAAGTGTCACAAATGTTCAACATTTCAGCAGTGAAGATGAGGCACCTCTGACATATTTCAAATCtctacctaaaaaaaaatctatagttGCTCAAGAAGGTGCTGAACACGCATTTAAACAACCAGCATGTagcattaataataaagaaatggaTAATTCTAAAGCTAAAGATTCTAAAAATTCTAGTGAATCGATTTCGATCCCGGTAACGACGGTTACAACTAATCTAATTGATTCTCAAGTTAACGAACAACCACAAGCAGATCGTGCATATTCTCTTTCTACCTACGACAAGTCACAGAAGACCCCATCGAAATCCATCTATGCCAACATGGACAATATAGAGAAATGGTTAGACGATGTTCTTAACGATAAAGAGCTCTCTGAAGTTGTCGCTTTAATAGAAGATAAAGATGATGATCCCAAGGTGTGTCCATCTGTGGAGTTCACAACAGTGCAGCAAGTGATCGCGGCACCGCAACAGGATCTAGAACGGCGCTGTAGAACATGTTCACCCTGTCGGCGCGTGGACAAAGTAAAATCCATCATCAATTTAGTGAGGTCTTGCAGCGAAACCTCTTCCGACGTGTACAGCTTCGACGACGTAGAGGAGGGCCTGAACAAGCAGCGCTTCAAAAGTCGGCGTGCGCCACTTACCGATCCCGAGTGCAACACAATATATCTAGACCTACTGCCCAAGAACAGCCCGCACCTAGTGAGAATCACTCTGGTGAGCGCCCCGAACCGGCCGAAGCAGATCATGCGGGCCAGCCTGATGGCGCGGTCGCTGGCCACCGAGAGCATCCTGTCCATGGTGGACTGCGAGCACCTGCTGGACCAGCTGCTGGACACGCTGTCGCTGAACCAGCGCCTGCCGCGGCCATCGCCCCCGCACAAGGCGGTGCAAGTGCCGCGGCCGCCAACGCCGCCGCGAGCCCGCAGCCCGGCGCAGTCGCCGCCACCGTCGCCGTCGCCGCCGTCGccgtcgccgccgccgccgccgccgtcgCCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTCGCGCATCGTCAACGCGCCTGTGTTCTATCCGACCGCCGACGAGTTCAAGGTAGGGGTCTGCTTCCTACCGCTGCTGCCACTTCGACTCTTGTTCTTcgGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGgtggaaggcatggaactcaacctgccaaagctgtttaacttggtgcagcagcaaggtggtctcaagagagtgatagagaagaagcgatggggtcgcattgcagaagaaatgcgctgcaccaaactgtccaacccggaaaagaaatttgatcagatatatgtcaaatatttgttgccttacgacacaatgtctagccGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGatagcagcaaacgtgatggcgactcacttccctgggccaaatgcaccgacggcggcggaggtggagctgctctactggaagatggtgatgcttggcactgaacacatctgcgtcaactcggcgtccattgacaccggggaacaggggctcgagcagaatccaggcgaattcattttagttttgcCGAAAGCCTATTCCTGCTCTATAAGCACCGGTTATAATGAGTCGGAAAGTGTGTACTTTGCTACTGGTGGCTGGTTCGACAACATCGGTGATGTGTTTGGTGAACTTAAGGCGACATGTGAACCGACCATGTTCGCTCTTGAGCATCTACTGCTAGGAGCGGCCAATGCAAAGGATTTAGAGAAAGCAAGACGGAAACGGGCCGCCGCATGGCTGCAGCAACTGCTAACTCTTGAGATTACTTCACGGAGGGCGCTGGTGTCGGCTGGAGTGACAGTAGTGCCGTCACCATCGATTCAATTGACGGAACAAACCGCGTGGAATGTTCGTCTCGTATCTGAATGTGAGATATGTAGGTCTACGCTGTATCTATCAGTAGTCAAAGGACTTCCTTCATCCACAGGCACCACTTGTCCCACGCACGCTCTCCATCTACTGAACCTTCCAAAACATAAGGAAAATATACCCCTTCTCGAGCTGCACCTCAAAGTGTCAGATGAAGATCTCAACACAATGTTATCTGATGCGCAAGCAATTCTTTCTATTGCGCATAAGACTGGTCTACGTGAGTTGGAGATCTTGAAGCGGCTCAACGACGCAGATTCGGAGGACAAGTTCCATTGTCTCCGATTGTTCAGGCACTTCTTCCACAAGCGCCATCTGTGCATGGTCCTCGAACCTCTCTCCATGAATCTCAGGGAGGTGCTCAAGAAGTACGGCAAGAACAGCGGCATACATATTAAAGCTGTCAAAAGCTACACACAGCAGATTCTGCTCGCATTGAAATTGCTTAAGAAAACCGGTATATTGCATGAAGAGATAAAACCAGATAACATCTTAGTGAACGAGAGCAAGTTGATACTCAAGCTCTGTGACTTTGGTTCTGCTACGCATGTGTCAGACAACGAAATAACTCCGTACTTAGTCTCGCGTTTCTATCGAGCTCCAGAAATTATCCTTGGATGTTCCTACGACCACGGCATAGACATGTGGTCCACCGCTTGTACCATTTACGAACTGTCAATAGGAAAAATTATGTTCATCGGAAAGTCTAACAATGAGATGTTGAAGTACTTTATGGATCTGAAAGGGAAAATACCTAACAAGATCATAAAGAAAGGAATCTTCAAGGATCAGCATTTTGACGCAAACTGCAACTTCCTGTATCATGAATTAGATATTGTTACAGAAAGGGAAAAGGTAGTAGTGATGTCGACGATAAAGCCAACCCGTGTCCTTCAGTCTCAGTTGGCTCCTGCCCACCATCGTCTGCCGACAGCGGAGGCCAAGAAGGTTGCACAACTCAAGGATCTCCTCGAACGAATGCTAATGCTAGATCCGGCTAAAAGAGCCTCAGTCAATCATTGTCTCACTCACCCTttttatacaagaaaaaatttagattaa
Protein Sequence
MDSPRRCQKQTWAQRKFAQGYQPPVGTGSHNNTTTTRDEQTLLDIRPPKTVKHAMSAIELLDLVSFKNLHQHYVQPVVVLERMKSKADAIEPHRKKVHRDKDIKKHNTRSVTNVQHFSSEDEAPLTYFKSLPKKKSIVAQEGAEHAFKQPACSINNKEMDNSKAKDSKNSSESISIPVTTVTTNLIDSQVNEQPQADRAYSLSTYDKSQKTPSKSIYANMDNIEKWLDDVLNDKELSEVVALIEDKDDDPKVCPSVEFTTVQQVIAAPQQDLERRCRTCSPCRRVDKVKSIINLVRSCSETSSDVYSFDDVEEGLNKQRFKSRRAPLTDPECNTIYLDLLPKNSPHLVRITLVSAPNRPKQIMRASLMARSLATESILSMVDCEHLLDQLLDTLSLNQRLPRPSPPHKAVQVPRPPTPPRARSPAQSPPPSPSPPSPSPPPPPPSPPSPPPIDRTQTPATSESNGFDAEGSRIVNAPVFYPTADEFKVGVCFLPLLPLRLLFFGERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKVEGMELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMSSRERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGLEQNPGEFILVLPKAYSCSISTGYNESESVYFATGGWFDNIGDVFGELKATCEPTMFALEHLLLGAANAKDLEKARRKRAAAWLQQLLTLEITSRRALVSAGVTVVPSPSIQLTEQTAWNVRLVSECEICRSTLYLSVVKGLPSSTGTTCPTHALHLLNLPKHKENIPLLELHLKVSDEDLNTMLSDAQAILSIAHKTGLRELEILKRLNDADSEDKFHCLRLFRHFFHKRHLCMVLEPLSMNLREVLKKYGKNSGIHIKAVKSYTQQILLALKLLKKTGILHEEIKPDNILVNESKLILKLCDFGSATHVSDNEITPYLVSRFYRAPEIILGCSYDHGIDMWSTACTIYELSIGKIMFIGKSNNEMLKYFMDLKGKIPNKIIKKGIFKDQHFDANCNFLYHELDIVTEREKVVVMSTIKPTRVLQSQLAPAHHRLPTAEAKKVAQLKDLLERMLMLDPAKRASVNHCLTHPFYTRKNLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-