Cnem000421.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- Kdm5a
- Assembly
- GCA_949316135.1
- Location
- OX438595.1:4518336-4523902[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-17 8.1e-15 55.4 0.0 6 89 264 344 260 344 0.89
Sequence Information
- Coding Sequence
- ATGGACAGTCCAAGACGTGGTCAAAAGCAGACATGGGCGCAGCGTAAATTCGCTCAAGGATACCAGCCACCCTTTGGGACTGTCAGCAACAACAACACAACAACCACCAGAGATGAACAAGCCCTACTCGACATAAGACCCACCAAAACCATGAAACATGACATGAGTGCTATAGAATTATTGGATTTAGTGtcttttaaaaCTCCTATCACTCCAGCTTTGCAAGAGAAATCGCGGCCTTTAGCTGTGGCTGACGCTACTACGTTAcccgaaaaaaataagaatactgaAGCTATTGAATCTACTGGGCATGCAATGTATGGAGACACGCTGTCGCTGAACCAGCGCCTGCCGCGGCCATCGCCCCCGCACAAGGCGGTGCAAGTGCCGCGGCCGCCAACGCCGCCGCGAGCCCGCAGCCCGGCGCAGTCGCCGCCACCGTCGCCGTCGCCGCCGTCGccgtcgccgccgccgccgccgccgtcgCCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTCGCGCATCGTCAACGCGCCTGTGTTCTATCCGACCGCCGACGAGTTCAAGGATCCGATAGCTTATTTCGAGAAGATTATGGTGAAAGCCGATCAGTtcgcaatttgcaaaattgtagctccgaaaggtttcaaacccgcttgcactctcgacggcatggacaggttcaacgtcatgaaccaatacatagtgaggctatacaacaggtgggggccggcggcgagggagatgtgtgccatcaaggcacatctatcctcacagagcgttattttctcgaacgcaccattgGTGGAAGGCATGGAACTCAACCTGCCAAAGCTGTTTAACTTGGTGCAGCAGCAAGGTGGTCTCAAAAGAGTGATAGAGAAGAAGCGATGGGGTCGCATTGCAGAAGAAATGCGCTGCACCAAACTGTCCAACCcggaaaatatatttgatcagatatatgtcaaatatttgttgccttacgacacaatgtctagccGGGAACGCCAACAGATACTTTGCAAGGTAGAAAAAGGTTGGAATAAGAAGAACCAGAAGATTCTTGACCGCGCTGTCAGTCCGCTGCACCGACAGAAGAAGATATTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCGGAGGACGACGCGAGGGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAGATTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTATTGGAAGATAGTGATGCTTGGCACTGAACACATCTGCGTCAATACGGCGTCCATCGACACCGGGGAGCAGGGGTACGGCTTCACTACGAACAAAGCAGACTCCATGTCCAAACACCCCTGGAACCTAAAGgtaatgagtaagaacaaggccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggtatgctgttctctaccagctgttggcaccgagacccgcacAGCCTAccctgggtcgagtacatgcacaacggacccagcaagatatggtatggaatccctGACGCTAAaagtcaggcattcagaaaagcagtagaaacacTGTGCCCATCTTTCTGtctcaataaaatagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcactctgtgtaggctcgagcagaatccaggcgaattcattttagttttgcCGAAAGCCTATTCCTGCTCTATAAGCACCGGTTATAATGAGTCGGAAAGTGTGTACTTTGCTACTGGTGGCTGGTTCGAAAACATCGGTGATGTGTTTGCTGAACTTAAGGCGACATGTGAACCGACCATGTTCGCTCTTGAGCATCTACTGCTAGGAGCGGCCAATGCAAAGGATTTAGAGAAAGCAAGACGGAAACGGGCCGCCGCATGGCTGCAGCAACTTCTAACTCTTGAGATTACTTCACGGAGGGCGCTGGTGTCGGATGGAGTGACAGTAGTGCCGTCACCATCGATTCAATTGACGGAACAGACCGCGTGGAACGTCCGTCACGAATCTGAATGTGAGATATGTAGGTCTACGCTGTATCTATCAGTAGTCAAAGGACTTCCTTCATCCACAGGCACCACTTGTCCCACGCACGCTCTCCATCTACTGAACCTTCcaaaacatcgaaaaaatgtatttcaaatCGTGCTGTACTTTAAAGTATCAAATGAAGAtctcaacaaaatgttatgtgaCGTGCAAGCCATTCTTTCCATTGCTTAg
- Protein Sequence
- MDSPRRGQKQTWAQRKFAQGYQPPFGTVSNNNTTTTRDEQALLDIRPTKTMKHDMSAIELLDLVSFKTPITPALQEKSRPLAVADATTLPEKNKNTEAIESTGHAMYGDTLSLNQRLPRPSPPHKAVQVPRPPTPPRARSPAQSPPPSPSPPSPSPPPPPPSPPSPPPIDRTQTPATSESNGFDAEGSRIVNAPVFYPTADEFKDPIAYFEKIMVKADQFAICKIVAPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCAIKAHLSSQSVIFSNAPLVEGMELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPENIFDQIYVKYLLPYDTMSSRERQQILCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEDDARVMWALSEAEDCIVQGRSMNLPRFRKIAANVMATHFPGPNAPTAAEVELLYWKIVMLGTEHICVNTASIDTGEQGYGFTTNKADSMSKHPWNLKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSTSCWHRDPHSLPWVEYMHNGPSKIWYGIPDAKSQAFRKAVETLCPSFCLNKIVWLPSDITMIPPNLLVEHGVTLCRLEQNPGEFILVLPKAYSCSISTGYNESESVYFATGGWFENIGDVFAELKATCEPTMFALEHLLLGAANAKDLEKARRKRAAAWLQQLLTLEITSRRALVSDGVTVVPSPSIQLTEQTAWNVRHESECEICRSTLYLSVVKGLPSSTGTTCPTHALHLLNLPKHRKNVFQIVLYFKVSNEDLNKMLCDVQAILSIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323266; iTF_00323267; iTF_00323268; iTF_00323262; iTF_00323263; iTF_00323264;
- 90% Identity
- iTF_00323266; iTF_00323267; iTF_00323268; iTF_00323262; iTF_00323263; iTF_00323264;
- 80% Identity
- iTF_00323262; iTF_00323263; iTF_00323264;