Cnem000075.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- Kdm5a
- Assembly
- GCA_949316135.1
- Location
- CASGFM010000033.1:84640-87019[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-18 5.8e-15 55.9 0.0 6 89 94 174 90 174 0.89
Sequence Information
- Coding Sequence
- CGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTCGCGCATCGTCAACGCGCCTGTGTTCTATCCGACCGCCGACGAGTTCAAGGATCCGATAGCTTATTTCGAGAAGATTATGGTGAAAGCCGATCAGTtcgcaatttgcaaaattgtagctccgaaaggtttcaaacccgcttgcactctcgacggcatggacaggttcaacgtcatgaaccaatacatagtgaggctatacaacaggtgggggccggcggcgagggagatgtgtgccatcaaggcacatctatcctcacagagcgttattttctcgaacgcaccattgGTGGAAGGCATGGAACTCAACCTGCCAAAGCTGTTTAACTTGGTGCAGCAGCAAGGTGGTCTCAAAAGAGTGATAGAGAAGAAGCGATGGGGTCGCATTGCAGAAGAAATGCGCTGCACCAAACTGTCCAACCcggaaaatatatttgatcagatatatgtcaaatatttgttgccttacgacacaatgtctagccGGGAACGCCAACAGATACTTTGCAAGGTAGAAAAAGGTTGGAATAAGAAGAACCAGAAGATTCTTGACCGCGCTGTCAGTCCGCTGCACCGACAGAAGAAGATATTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCGGAGGACGACGCGAGGGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAGATTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTATTGGAAGATAGTGATGCTTGGCACTGAACACATCTGCGTCAATACGGCGTCCATCGACACCGGGGAGCAGGGGTACGGCTTCACTACGAACAAAGCAGACTCCATGTCCAAACACCCCTGGAACCTAAAGgtaatgagtaagaacaaggccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggtatgctgttctctaccagctgttggcaccgagacccgcacAGCCTAccctgggtcgagtacatgcacaacggacccagcaagatatggtatggaatccctGACGCTAAaagtcaggcattcagaaaagcagtagaaacacTGTGCCCATCTTTCTGtctcaataaaatagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcactctgtgtaggctcgagcagaatccaggcgaattcattttagttttgcCGAAAGCCTATTCCTGCTCTATAAGCACCGGTTATAATGAGTCGGAAAGTGTGTACTTTGCTACTGGTGGCTGGTTCGAAAACATCGGTGATGTGTTTGCTGAACTTAAGGCGACATGTGAACCGACCATGTTCGCTCTTGAGCATCTACTGCTAGGAGCGGCCAATGCAAAGGATTTAGAGAAAGCAAGACGGAAACGGGCCGCCGCATGGCTGCAGCAACTTCTAACTCTTGAGATTACTTCACGGAGGGCGCTGGTGTCGGATGGAGTGACAGTAGTGCCGTCACCATCGATTCAATTGACGGAACAGACCGCGTGGAACGTCCGTCACGAATCTGAATGTGAGATATGTAGGTCTACGCTGTATCTATCAGTAGTCAAAGGACTTCCTTCATCCACAGGCACCACTTGTCCCACGCACGCTCTCCATCTACTGAACCTTCcaaaacatcgaaaaaatgtatttcaaatCGTGCTGTACTTTAAAGTATCAAATGAAGAtctcaacaaaatgttatgtgaCGTGCAAGCCATTCTTTCCATTGCTTAg
- Protein Sequence
- RTQTPATSESNGFDAEGSRIVNAPVFYPTADEFKDPIAYFEKIMVKADQFAICKIVAPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCAIKAHLSSQSVIFSNAPLVEGMELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPENIFDQIYVKYLLPYDTMSSRERQQILCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEDDARVMWALSEAEDCIVQGRSMNLPRFRKIAANVMATHFPGPNAPTAAEVELLYWKIVMLGTEHICVNTASIDTGEQGYGFTTNKADSMSKHPWNLKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSTSCWHRDPHSLPWVEYMHNGPSKIWYGIPDAKSQAFRKAVETLCPSFCLNKIVWLPSDITMIPPNLLVEHGVTLCRLEQNPGEFILVLPKAYSCSISTGYNESESVYFATGGWFENIGDVFAELKATCEPTMFALEHLLLGAANAKDLEKARRKRAAAWLQQLLTLEITSRRALVSDGVTVVPSPSIQLTEQTAWNVRHESECEICRSTLYLSVVKGLPSSTGTTCPTHALHLLNLPKHRKNVFQIVLYFKVSNEDLNKMLCDVQAILSIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -