Cnem000413.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- KDM5A
- Assembly
- GCA_949316135.1
- Location
- OX438595.1:4431243-4471627[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 9.6e-15 55.1 0.0 6 89 750 830 746 830 0.89 2 2 9.3e-16 6.1e-13 49.4 0.0 17 89 1697 1766 1688 1766 0.85
Sequence Information
- Coding Sequence
- ATGACTTCTGATGAAAAAACCAATATAAAGTGTATTAAGGGCAAAATAGACGTGAACAAGGCTAGTGGTCCAGAGGGAATCCCTGCAGTGGTGCTGCGCAACTGTGCTCCTGAGTTGTCTCCCATCCTAACACGCCTGTATCGCCTCTCACTTGAGACTGGAGTTAACGTGCAGCCTGTGCCCAAAAAAGGAAGCCGTGACGACCCATCTAATTATAGACCCATTTCAGTCACTTCTGTACTCTGTAAGACTATGGAACGTGTACTGAATAATCGTCTCCTTTGCTACCTTGAAGACAATGATCTCCTAAGTGACCGTCAGTTTAGCCGTGGTCGGTCTACTGGGGATCTTCTTGTGTACGCCACCCACCTTTGGAGCGAGGCTATAGAGAGATACGGTGAAGCCATCGCAGTTTCACTTGACGTCTCCAAGGCCTTTGATCGGGTTTGGCATGtgCATATGCAAAAGAAGATGGACAGTCCAAGACGTTGTCAAAAACAGACATGGGCACAGCGTAAATTCGCTCAAGGATACCAGCCACCCGTTGGGACTGGCAGCCACAACAACACAACAACCACCAGAGATGAACAAACCCTACTCGATATAAGACCCCCCAAAACCGTCAAACATGCCATGAGTGCAATAGAATTATTGGACTTAGTGtcttttaaaaATCTTCACCAACATTATGTACAACCAGTAGTGGTGCTGGAACGTATGAAGTCGAAAGCCGACGCAATAGAACCACATCGAAAAAAAGTTCATAgagataaagatattaaaaagcaCAACACAAGAAGTGTCACAAATGTTCAACATTTCAGCAGTGAAGATGAGGCACCTCTGACATATTTCAAATCtctacctaaaaaaaaatctatagttGCTCAAGAAGttttagcTCCTCTTGTAACTACGGCTTCGCCGGAGGAATCATGCCCTTTAGCTGTGACTAACGCTACTAAGATACTTGGAAAATTGGATAACCCGATATATAAAGAAATGAAGAAAACCAAAGCCGTTGAATCTATTGGTGCTGAACACGCATTTAAACAACCAGCATGTagcattaataataaagaaatggaTAATTCTAAAGCTAAAGATTCTAAAAATTCTAGTGAATCGATTTCGATCCCGGTAACGACGGTTACAACTAATCTAATTGATTCTCAAGTTAACGAACAACCACAAGCAGATCGTGCATATTCTCTTTCTACCTACGACAAGTCACAGAAGACCCCATCGAAATCCATCTATGCCAACATGGACAATATAGAGAAATGGTTAGACGATGTTCTTAACGATAAAGAGCTCTCTGAAGTTGTCGCTTTAATAGAAGATAAAGATGATGATCCCAAGGTGTGTCCATCTGTGGAGTTCACAACAGTGCAGCAAGTGATCGCGGCACCGCAACAGGATCTAGAACGGCGCTGTAGAACATGTTCACCCTGTCGGCGCGTGGACAAAGTAAAATCCATCATCAATTTAGTGAGGTCTTGCAGCGAAACCTCTTCCGACGTGTACAGCTTCGACGACGTAGAGGAGGGCCTGAACAAGCAGCGCTTCAAAAGTCGGCGTGCGCCACTTACCGATCCCGAGTGCAACACAATATATCTAGACCTACTGCCCAAGAACAGCCCGCACCTAGTGAGAATCACTCTGGTGAGCGCCCCGAACCGGCCGAAGCAGATCATGCGGGCCAGCCTGATGGCGCGGTCGCTGGCCACCGAGAGCATCCTGTCCATGGTGGACTGCGAGCACCTGCTGGACCAGCTGCTGGACACGCTGTCGCTGAACCAGCGCCTGCCGCGGCCATCGCCCCCGCACAAGGCGGTGCAAGTGCCGCGGCCGCCAACGCCGCCGCGAGCCCGCAGCCCGGCGCAGTCGCCGCCACCGTCGCCGTCGCCGCCGTCGccgtcgccgccgccgccgccgccgtcgCCGCCGTCTCCGCCACCGATCGACCGCACGCAGACGCCGGCCACGTCCGAGTCCAACGGCTTCGACGCCGAGGGCTCGCGCATCGTCAACGCGCCTGTGTTCTATCCGACCGCCGACGAGTTCAAGgatccgatagcttatttcgagaagattatggtgaaagctgatcagttcgcaatttgcaaaattgtagctccgaaaggtttcaaacccgcttgcactctcgacggcatggacaggttcaacgtcatgaaccaatacatagtgaggctatacaacaggtgggggccggcggcgagggagatgtgtgccatcaaggcacatctatcctcacagagcgttattttctcgaaggcaccattggtggaaggcatggaactcaacctgccaaagctgtttaacttggtgcagcagcaaggtggtctcaagagagtgatagagaagaagcgatggggtcgcattgcagaagaaatgcgctgcaccaaactgtccaacccggaaaagaaatttgatcagatatatgtcaaatatttgttgccttacgacacaatgtctagccGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGatagcagcaaacgtgatggcgactcacttccctgggccaaatgcaccgacggcggcggaggtggagctgctctactggaagatggtgatgcttggcactgaacacatctgcgtcaactcggcgtccattgacaccggggaacaggggtacggcttcactacgaacgaagcagactccatgtccaaacacccctggaacctaaaggtaatgagtaagaacaaagccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggcatgctgttctctaccagctgctggcaccgagacccgcacggcctgccctgggtcgagtacatgcacaatggaccaagcaagatatggtatggaatccccgatgtcaatagtcaggcattcagaaaagcagtagaaacgctgtgcccgtcattctgcctcaataaaacagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcattctgtgtaggctcgagcagaatccaggcgaattcatattagttttgacCGATCCGATAGGATCCGATAGCTTATTTCGAGAAGATTATGGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGatagcagcaaacgtgatggcgactcacttccctgggccaaatgcaccgacggcggcggaggtggagctgctctactggaagatggtgatgcttggcactgaacacatctgcgtcaactcggcgtccattgacaccggggaacaggggtacggcttcactacgaacgaagcagactccatgtccaaacacccctggaacctaaaggtaatgagtaagaacaaagccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggcatgctgttctctaccagctgctggcaccgagacccgcacggcctgccctgggtcgagtacatgcacaatggaccaagcaagatatggtatggaatccccgatgtcaatagtcaggcattcagaaaagcagtagaaacgctgtgcccgtcattctgcctcaataaaacagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcattctgtGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGatagcagcaaacgtgatggcgactcacttccctgggccaaatgcaccgacggcggcggaggtggagctgctctactggaagatggtgatgcttggcactgaacacatctgcgtcaactcggcgtccattgacaccggggaacaggggtacggcttcactacgaacgaagcagactccatgtccaaacacccctggaacctaaaggtaatgagtaagaacaaagccaacatgctgcggttcatgggtcccgtggttggcgtgaccgtcccgacgttgcatctcggcatgctgttctctaccagctgctggcaccgagacccgcacggcctgccctgggtcgagtacatgcacaatggaccaagcaagatatggtatggaatccccgatgtcaatagtcaggcattcagaaaagcagtagaaacgctgtgcccgtcattctgcctcaataaaacagtatggctgcccagcgacataactatgatccctcctaacctgctggttgagcatggagtcattctgtGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGgtggaaggcatggaactcaacctgccaaagctgtttaacttggtgcagcagcaaggtggtctcaagagagtgatagagaagaagcgatggggtcgcattgcagaagaaatgcgctgcaccaaactgtccaacccggaaaagaaatttgatcagatatatgtcaaatatttgttgccttacgacacaatgtctagccGGGAGCGCCAGCAGTTGCTTTGCAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGATAGCAGCAAACGTGATGGCGACTCACTTCCCTGGGCCAAATGCACCGACGGCGGCGGAGGTGGAGCTGCTCTACTGGAAGATGGTGATGCTTGGCACTGAACACATCTGCGTCAACTCGGCGTCCATTGACACCGGGGAACAGGGGTACGGCTTCACTACGAACGAAGCAGACTCCATGTCCAAACACCCCTGGAACCTAAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGGTAGAAAAAGGCTGGAATAAGAAGAACCAGAAGATTCTTGACCGTGCTGTCAGTCCGCTGCATCGACAGAAGAAGATCTTAGGCGGCTTGGATAGTTCAGGTGAGGAGAGCTCAGAGGAGGAGGACGAGGAAGACGGGAGAGTCATGTGGGCGCTGTCCGAGGCGGAGGACTGTATCGTGCAAGGACGGAGCATGAACCTACCCAACTTCAGAAAGatagcagcaaacgtgatggcgactcacttccctgggccaaatgcaccgacggcggcggaggtggagctgctctactggaagatggtgatgcttggcactgaacacatctgcgtcaactcggcgtccattgacaccggggaacagggCGCAAATAGCCTCTACCGCTCTCTAATGTCTGTCACTCGTACAATGGAGATCCGGAAACAACATGGTCGTTTGACTCTGTTTTCTCAATACCTCCAGTACAGGCCTGTTTGTTATCTATTCTCCTAA
- Protein Sequence
- MTSDEKTNIKCIKGKIDVNKASGPEGIPAVVLRNCAPELSPILTRLYRLSLETGVNVQPVPKKGSRDDPSNYRPISVTSVLCKTMERVLNNRLLCYLEDNDLLSDRQFSRGRSTGDLLVYATHLWSEAIERYGEAIAVSLDVSKAFDRVWHVHMQKKMDSPRRCQKQTWAQRKFAQGYQPPVGTGSHNNTTTTRDEQTLLDIRPPKTVKHAMSAIELLDLVSFKNLHQHYVQPVVVLERMKSKADAIEPHRKKVHRDKDIKKHNTRSVTNVQHFSSEDEAPLTYFKSLPKKKSIVAQEVLAPLVTTASPEESCPLAVTNATKILGKLDNPIYKEMKKTKAVESIGAEHAFKQPACSINNKEMDNSKAKDSKNSSESISIPVTTVTTNLIDSQVNEQPQADRAYSLSTYDKSQKTPSKSIYANMDNIEKWLDDVLNDKELSEVVALIEDKDDDPKVCPSVEFTTVQQVIAAPQQDLERRCRTCSPCRRVDKVKSIINLVRSCSETSSDVYSFDDVEEGLNKQRFKSRRAPLTDPECNTIYLDLLPKNSPHLVRITLVSAPNRPKQIMRASLMARSLATESILSMVDCEHLLDQLLDTLSLNQRLPRPSPPHKAVQVPRPPTPPRARSPAQSPPPSPSPPSPSPPPPPPSPPSPPPIDRTQTPATSESNGFDAEGSRIVNAPVFYPTADEFKDPIAYFEKIMVKADQFAICKIVAPKGFKPACTLDGMDRFNVMNQYIVRLYNRWGPAAREMCAIKAHLSSQSVIFSKAPLVEGMELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMSSRERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEADSMSKHPWNLKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSTSCWHRDPHGLPWVEYMHNGPSKIWYGIPDVNSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVILCRLEQNPGEFILVLTDPIGSDSLFREDYGERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEADSMSKHPWNLKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSTSCWHRDPHGLPWVEYMHNGPSKIWYGIPDVNSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVILWERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEADSMSKHPWNLKVMSKNKANMLRFMGPVVGVTVPTLHLGMLFSTSCWHRDPHGLPWVEYMHNGPSKIWYGIPDVNSQAFRKAVETLCPSFCLNKTVWLPSDITMIPPNLLVEHGVILWERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKVEGMELNLPKLFNLVQQQGGLKRVIEKKRWGRIAEEMRCTKLSNPEKKFDQIYVKYLLPYDTMSSRERQQLLCKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGYGFTTNEADSMSKHPWNLKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKVEKGWNKKNQKILDRAVSPLHRQKKILGGLDSSGEESSEEEDEEDGRVMWALSEAEDCIVQGRSMNLPNFRKIAANVMATHFPGPNAPTAAEVELLYWKMVMLGTEHICVNSASIDTGEQGANSLYRSLMSVTRTMEIRKQHGRLTLFSQYLQYRPVCYLFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323250; iTF_00323252;
- 90% Identity
- iTF_00323250;
- 80% Identity
- -