Cnem020800.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- cnc
- Assembly
- GCA_949316135.1
- Location
- OX438624.1:5216354-5230444[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-13 3.1e-10 40.3 5.9 3 65 394 456 392 456 0.94
Sequence Information
- Coding Sequence
- ATGCGTTCTATGTCTGTGGAGCAGAGGTGGCAGGATCTGGCGTCGCTGCTGACGATCCCCCCGCCGCCGGAGCAGTACCAGCACTACCACCACCATCACCAGCATCCGCACAACATCAGTGCTCATGGCGCGGCTGCAGGGTATGCTCCGAACTACCACGCCCCCCTTCCTCCGCCTATGCCGGAGAAACACCCTGATGCTTacgGTGCGGCCGCTCCGATAGATGGCGCTTATAAAGTCGAATCAGCCCATCATCCACAACAGCACGATGGTATTTACTATCAGaaTTCGACGAGCGAAATGGCAACGCCGACGACTCAAGACGGCTTCCTTCAGTCGATACTCAATGATGAAGATCTTCAGCTGATGGATATGGCTATGAACGAGGGGATGTACACCATGAGGATGCTTGACAGCGCCACCGGACACCATGCTGTACATCACAACCACGCACATATGATGATGACCGAGCGTGACTCGGCATCCGATAGCGCGGTATCGTCTATGGGTTCTGAACGTGTTCCGTCTCTCTCTGACGGTGAATGGTGCGATGCAAGCGACTCGGCGCAGGAGTTTCACAGCTCTAAATTTCGTCCGTACGACGCCGGCTACGGGAGAGACAGGGCTCACCATCAACCACCTCAGAAGAAACATCACATGTTCGGGAAGAGATGCTTCCAGgagCAAACACCGCAGACATTAGAGCCGCTGGCACCGCCTCGACCCGCCCCGGTCAAGTACGAGTGTCCCGAACAAACCTACCACCACGACGCCATGCACATGCACAACGaGTATTCGTCTAGGCAACAGCTGGTGCCTCACGTGTCACAGCCGGCCCTCGACATAACAGCGCCTCACTCAAGTCACTCACTATTACAGCCGGGTGTGCACCTCCCGGAATCGAACCCGCGTCTGTTAATGGACAGAGTCCGACACAACCACACTTACAGCTCCCAGCAGGATTCCAGACCGGCGGCTGTCAGAGACAAACGAGTCCGTCGCGTCACGGACGGCAGTATGTCCGATAGTGGGTCGTCAGTCGGACACCTGACACGGGACGAGAAACGAGCAAAGGCACTCGGTATACCGTTGGAAGTGCAAGATATAATAAACTTGCCCATGGACGAGTTTAACGAGCGCCTGTCAAAGCATGATCTCAGTGAAGCCCAGCTGTCTCTCATCAGAGATATACGTAGGCGAGGCAAGAATAAGGTGGCTGCACAGAACTGCCGCAAACGCAAGCTGGACCAGATCACGTCGCTGGCGGACGAAGTGCGCTCCGTGCGCGACCGCAAGCTGCGCACCCAGCGTGACCACCACACGCTGCACGCTCAGCGCGCCAGCCTCAAGGAACTCTTCCAGGCGCTCTACAGACACGTGTTCCAGAACCTCCGCGACCCCGAGGGCCGTCCTATATCATCAGCGCAATACTCTCTTCAACAAGCTGCTGACGGCAACGTCGTGCTTGTACCCAAGATGCAGCACGCTGaTAACACCATGAACAGGACAGACGATGATATGAACGAAAGGAAAGCTAAGCACTACGACCAgtga
- Protein Sequence
- MRSMSVEQRWQDLASLLTIPPPPEQYQHYHHHHQHPHNISAHGAAAGYAPNYHAPLPPPMPEKHPDAYGAAAPIDGAYKVESAHHPQQHDGIYYQNSTSEMATPTTQDGFLQSILNDEDLQLMDMAMNEGMYTMRMLDSATGHHAVHHNHAHMMMTERDSASDSAVSSMGSERVPSLSDGEWCDASDSAQEFHSSKFRPYDAGYGRDRAHHQPPQKKHHMFGKRCFQEQTPQTLEPLAPPRPAPVKYECPEQTYHHDAMHMHNEYSSRQQLVPHVSQPALDITAPHSSHSLLQPGVHLPESNPRLLMDRVRHNHTYSSQQDSRPAAVRDKRVRRVTDGSMSDSGSSVGHLTRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRSVRDRKLRTQRDHHTLHAQRASLKELFQALYRHVFQNLRDPEGRPISSAQYSLQQAADGNVVLVPKMQHADNTMNRTDDDMNERKAKHYDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -