Cnem004685.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- XBP1
- Assembly
- GCA_949316135.1
- Location
- OX438599.1:9090584-9092242[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 1.9e-14 53.8 12.3 2 64 43 105 43 106 0.96 2 2 0.00067 0.61 10.5 0.3 32 55 87 110 86 112 0.90
Sequence Information
- Coding Sequence
- ATGAGTGCCCCTATAATTATCACAGTACCTAACAACTACTTGTCGGTGGACGAGATACCTTCGAAGGTAGTCGTCGACGACAGCGCTCCCGTCTCCAGAAAACGAAGACTCGACCACTTGTCATGGGAGGAGAAGATGCAGAGGAAGAAGCTGAAGAATCGCGTGGCGGCGCAGACGTCCCGCGACAGGAAGAAGGCTAAGATGGATGAAATGGAGTCTCGGATTAACCAGCTGTGTGACATGAACGAGAAGTTGGTGAGCGAGGTGGAGAGCCTGAAGGCGTTGAACGAGAGACTGTTGAGCGAGAATACAGCGTTGAAGAGTGAGGCGGCGGCAGGCGGCGTCGCGGGGGCCCCCAGACCGGCAGCGTCTGAGCCTCGGCAGAAGGACGGGCCCCCAGCGGCGGCGCGTGCGGCACGCCTCCTCCTCACGATGTACCTCCTCTCACAGACCTCCTCCAGCACCTCGGCTCTGAAGAATACCTTGACACACTCCAGCAACTTGCAGAATCCCTCCTCCAAGAAATTGATGCAGGTGCTTCAAGAGAGACTGAAGATGCTCCCTGGAGAGTGCAATGAAAGAGCTCAAGTGGTGGGGCCCGCAGCAAAGCACATGGAATCCAGTGAAAGTGTAAAGGATGACATGAAACATGATGTAGACAGGATCCTGTCACAGCATTCCTATGCACATCCCTACACACCAGACCTGATCATCACACCACCACCCTCTGAACATGGAGACAAAGGAGATGTTTTCTATGAGAGCTTTGATGAGGCCAATGACTGCATCACAATAGAAGTGCCTTGTGAAGAACAGACAGAGACAGAGCCAAAAACAGAGGAAATAAGGCCTCTAAAGGTGGAGACAGATTTCAGTTTACTAACTGAAGGGGGTACAGGCGTCACGTTAGAGTGTGAAATGAAGTTACTGTCGCCATTGAGTTTGTCTCCTAAGTCAGTTGAAGATGATTTGTTTGCAGTGTCTCCTGCACACACAAGTCTAAGTTCGGACCTAGGTTACGAGTCCCTTGCCTCTCCCTTCAGTGAACCTGACCAGATGGACTTGTCAGACTTTTGGTGTGATTCCTTTTCAGAACTGTTCCCTGGATTAGCATAA
- Protein Sequence
- MSAPIIITVPNNYLSVDEIPSKVVVDDSAPVSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRINQLCDMNEKLVSEVESLKALNERLLSENTALKSEAAAGGVAGAPRPAASEPRQKDGPPAAARAARLLLTMYLLSQTSSSTSALKNTLTHSSNLQNPSSKKLMQVLQERLKMLPGECNERAQVVGPAAKHMESSESVKDDMKHDVDRILSQHSYAHPYTPDLIITPPPSEHGDKGDVFYESFDEANDCITIEVPCEEQTETEPKTEEIRPLKVETDFSLLTEGGTGVTLECEMKLLSPLSLSPKSVEDDLFAVSPAHTSLSSDLGYESLASPFSEPDQMDLSDFWCDSFSELFPGLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -