Basic Information

Insect: Chloromyia formosa
Gene Symbol: ZUP1
Assembly: GCA_964017055.1
Location: OZ024815.1:132989588-133009054[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.049 5.1 8.9 0.3 1 23 223 246 223 246 0.97

2 8 0.012 1.3 10.9 0.7 1 23 251 273 251 273 0.98

3 8 1.3e-05 0.0013 20.2 4.2 1 23 279 301 279 301 0.99

4 8 2.3e-06 0.00023 22.6 1.4 3 23 309 329 307 329 0.97

5 8 6.1 6.4e+02 2.3 1.9 1 23 365 388 365 388 0.91

6 8 0.073 7.5 8.4 0.0 2 23 394 416 394 416 0.95

7 8 0.26 27 6.7 0.0 2 23 599 621 598 621 0.95

8 8 1.3e-05 0.0014 20.2 0.1 2 23 645 667 644 667 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.049	5.1	8.9	0.3	1	23	223	246	223	246	0.97
2	8	0.012	1.3	10.9	0.7	1	23	251	273	251	273	0.98
3	8	1.3e-05	0.0013	20.2	4.2	1	23	279	301	279	301	0.99
4	8	2.3e-06	0.00023	22.6	1.4	3	23	309	329	307	329	0.97
5	8	6.1	6.4e+02	2.3	1.9	1	23	365	388	365	388	0.91
6	8	0.073	7.5	8.4	0.0	2	23	394	416	394	416	0.95
7	8	0.26	27	6.7	0.0	2	23	599	621	598	621	0.95
8	8	1.3e-05	0.0014	20.2	0.1	2	23	645	667	644	667	0.95

Sequence Information

Coding Sequence: ATGCCTGATTTTAGTAGTTCCAATTGTCGCGTTTGTTTGCAAGAATATCGCGAAGATTTTGAAAGCATTTATGACCTGGACGACACTATATTAAATCTCTCTCCGCTGGGAGTGATGTATGAAGAGCTTTTCTCATTGAAGATACACCTTGAATCTCACCACCCACGATACCTATGCAATTACTGTGGTCTACAATTAAAACTCTTTCACAACTTTAAAGCGAAAGCTCTAGAGTCATACGGAAAATTTGACGAAACTGATTCAAAAACTGTAGACGAATTGACTGTTACTGTACAGCTAGaaaatgatgttgatgttgaaaGTGAAACACACCATAAATATGATATAAAATTGGAAACGACAGAAATTGTAGAGCATGTCGAGCCGTTTGAAGAAGCGCCACCACCTCTTTCCAAGGAACTTGAGCCAACTGAGGAACATGGTGAAACCGAGCACATTGAAGCTGTCGAAGTGGAAACATGGGAAGACATGGATGGCGAAAAAAGCGACGGCTATGAAGATGACAATGAATTTGTGGATATTCAGTATTTGGATGATATTATGGAGAAAAGCGAAGCAGTTAGCATGGAAAATGAGGAAACAACTGAATGCGTAGAGGAAGAGGAGCCAAACGTTCCCAAGAAATACAAATCAGCGACTAGTGTGTATCCTTGTAAAAGTTGTGATCAGGTGTTTTTGAAGAAAGTCGAAATGATTAGTCACAGACGGATTGAACACAAACGTGAAATATTTTCATGCAATCAATGTCCGAAAAAGTTTTTATCCGAAGAGCAGTTTGGTGTTCACTTAAACACACATTGGGGTCTACCAGCCTACCAGTGCGACATGTGCAGCAAATCGTTCAAACAGAAAGTCCACTACATAAATCACCTGCGCAATCATTGGAATATACGAAATGTGCATTGCGAAACTTGTGGCAAAGGTTTCGTTACAAAATCTGATTTGAAAATGCACCTCCGAATGCATACCGATGAGCGTCGCTATGAATGTGATATTTGTTCCTGTGCGGATCGGGATATCATGTCGTCAGCGGATGATGATGCGGGAGCGTGCTATGTGCCGGCCCAGGAGCATTCGTGCGAAATTTGCGGCCTAACCGGACTCACGGACGATATGATGCGGGATCACACGAGAACGTGTCACGTCGAAGGGAACGCTCAATGTCCGTTTTGCGGATTCAGCGGAGTCTCACCAGCTGAGCTGCTACTCCACGTGAACCAGGCCCACTTGGACTATCTAACGCCCGAGAACGAGCTGATGAGTTTCATCGATGACCCCAGTCCCAGTATCGATGATGAATCCGACTCGCTGTCAGAATGTCAAGGTCTAACGCCACCAAATCAAAACTGCAACAATCATGGTCTAAATCATCAAAAGCCCAACGTTAATAGTGTAAAGTCCTCAGtaacagcaacagcagcagcaggaGCAACGATTTATAACGATATCTCTAATACAAATTATACGCCGTCGTGTTCGAACAACCCGAATCAGTCAAACGAATGTAATAATAAAAACTGTGATATGGTCAATGGTGGCAGCAGTAGTAATGGTGGCAGCAGTAGTAATGGTGGCAACAGTAGTAATGGTGGCAGCAGTAGTAATGGTGGTAGTACTAGTAGTAATTCAAATAGTAACAGTAAGGAGCAACTTGTAAATGGTTTTGATTTACCAAACGGTAGCGGTAGTGCTGGTCAAGGTTCGCCGTCACGCTCACAGCTTGGACTGAAAttgaaaagtcactcgccggccACACGTAAACAGAGTCCGTTGCAATGTCCATTATGTCCATATTCATCAGAGaatgcaaatattttggaggAACATATAAATCGCTCACATTTTGATCCACTTAGTCCTAGCGTTAATTCGAATTCTTCCAGCAATCACTTGAGTACCTTGAATGCACTACAATGTCCAATTTGTACGCGTACGTTTGAAAATTCTTCAGATTTAGAGCTTCACGTTAACATAGAGCATAGGGATATTTTAAGTCCTGGCAAAGTCAATACCAATGAGAACGGGGGTTACAGTGTCGGACACAATGGCAGTACTTGTCCCGTGTGCAATATTTCGCTGGACAAGATGAAATCTAAAGAAGTGGACTTGCATATCGAAGGACACTTTGCCAAAAGTCCGCTTAATGTTAATTCCAATTCGGATTTAGAGAAGGAGGCACAAAAATTGCGCGAACAACGTGAATTTGAAATGCTTCGTGCCCAATATGGAATGGACGATCAGGGTAACTTTCGCGAGCAATCGGCGGCTGCAATGCAACGGGCCGTTTATGCCGGCGAAATGAGTGTTGCCGACTACTATGAACGACAAGTTGGTCTACGGGCTGCAGAATCGCATGGAATTGATGATGGAACATCGTGTACAAAATCAGTTGCGCCACGTGTTCTATCGTTGTCGTCCTCGTCGCCGGGTGTTATTAAATCTTTAGTTTGCTCGGCCGTTGATCATTATGCTTCTAGCTATGGCGATAAGGGGTGGGGATGTGGCTATAGGAATCTTCAAATGCTTTTGTCATCGCTTTTGCAGAACACAACTTTTAATGAGGCGCTTTATTCCGCCTGGGGTACTCATGGTCCGTCAAGGACCGCTATGCCAAGCATCTCACGATTGCAGAAAATGGTGGAAGCCGCCTGGGCTCAAGGTTTCGATGTACAGGGTTCTGAACAACTTGGCTGCAAACTTCACAACACACGGAAGTGGATCGGTGCAACTGAAGTTGTAACGGTTTTATCGTGGTTGCGCATCAACTGCCAACTGGTCGATTTTCATCGTCCAACATCCGCAGATGGTCGACATCCGGAATTATTCAATTGGGTATTCCAATATTTCGATGAGCCACGTGTGTACACGCCGCCATTGTATCTCCAACATCAAGGACACTCACGAACAATTATAGGTATAGAACAGAGAGCATCTGGCCTAACATTATTGGTGCTGGATCCAAGTCATGGTCCGCGACAAGTAGCAGCATTAGGTTCATCACAAGACTCTTTAAGACTGATACGACGAGGACCATCAGCAATGAGAGCTCCACAATATCAAATTGTCGCCGTTTGGGGTCTCATTGATACCGAAGAACAATACCAAGTAAGTAAATTTTAA
Protein Sequence: MPDFSSSNCRVCLQEYREDFESIYDLDDTILNLSPLGVMYEELFSLKIHLESHHPRYLCNYCGLQLKLFHNFKAKALESYGKFDETDSKTVDELTVTVQLENDVDVESETHHKYDIKLETTEIVEHVEPFEEAPPPLSKELEPTEEHGETEHIEAVEVETWEDMDGEKSDGYEDDNEFVDIQYLDDIMEKSEAVSMENEETTECVEEEEPNVPKKYKSATSVYPCKSCDQVFLKKVEMISHRRIEHKREIFSCNQCPKKFLSEEQFGVHLNTHWGLPAYQCDMCSKSFKQKVHYINHLRNHWNIRNVHCETCGKGFVTKSDLKMHLRMHTDERRYECDICSCADRDIMSSADDDAGACYVPAQEHSCEICGLTGLTDDMMRDHTRTCHVEGNAQCPFCGFSGVSPAELLLHVNQAHLDYLTPENELMSFIDDPSPSIDDESDSLSECQGLTPPNQNCNNHGLNHQKPNVNSVKSSVTATAAAGATIYNDISNTNYTPSCSNNPNQSNECNNKNCDMVNGGSSSNGGSSSNGGNSSNGGSSSNGGSTSSNSNSNSKEQLVNGFDLPNGSGSAGQGSPSRSQLGLKLKSHSPATRKQSPLQCPLCPYSSENANILEEHINRSHFDPLSPSVNSNSSSNHLSTLNALQCPICTRTFENSSDLELHVNIEHRDILSPGKVNTNENGGYSVGHNGSTCPVCNISLDKMKSKEVDLHIEGHFAKSPLNVNSNSDLEKEAQKLREQREFEMLRAQYGMDDQGNFREQSAAAMQRAVYAGEMSVADYYERQVGLRAAESHGIDDGTSCTKSVAPRVLSLSSSSPGVIKSLVCSAVDHYASSYGDKGWGCGYRNLQMLLSSLLQNTTFNEALYSAWGTHGPSRTAMPSISRLQKMVEAAWAQGFDVQGSEQLGCKLHNTRKWIGATEVVTVLSWLRINCQLVDFHRPTSADGRHPELFNWVFQYFDEPRVYTPPLYLQHQGHSRTIIGIEQRASGLTLLVLDPSHGPRQVAALGSSQDSLRLIRRGPSAMRAPQYQIVAVWGLIDTEEQYQVSKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -