Basic Information

Insect: Chloromyia formosa
Gene Symbol: L
Assembly: GCA_964017055.1
Location: OZ024815.1:3362394-3401606[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.7e-06 0.001 20.6 1.7 1 23 330 352 330 352 0.98

2 18 0.81 83 5.1 5.8 1 23 358 380 358 380 0.98

3 18 4.2e-07 4.3e-05 24.9 3.1 1 23 386 408 386 408 0.99

4 18 3.5e-05 0.0036 18.9 0.2 1 23 414 436 414 436 0.98

5 18 7.4 7.7e+02 2.1 0.2 10 23 502 516 494 516 0.88

6 18 0.0046 0.47 12.2 0.7 2 23 542 564 541 564 0.96

7 18 0.13 14 7.6 0.4 1 23 665 687 665 687 0.95

8 18 0.0029 0.3 12.8 0.1 2 23 696 717 695 717 0.96

9 18 0.0012 0.12 14.0 1.4 1 23 725 750 725 750 0.88

10 18 2.4 2.4e+02 3.7 0.1 1 19 755 773 755 775 0.91

11 18 2.4 2.5e+02 3.6 0.5 1 23 785 808 785 808 0.94

12 18 0.0039 0.4 12.4 2.1 1 23 841 863 841 864 0.96

13 18 0.0018 0.19 13.4 4.6 2 23 1055 1077 1054 1077 0.96

14 18 0.025 2.6 9.9 0.1 1 23 1083 1105 1083 1105 0.96

15 18 0.69 71 5.3 0.8 2 23 1113 1134 1112 1134 0.96

16 18 5 5.2e+02 2.6 0.5 2 23 1222 1243 1222 1243 0.93

17 18 0.0021 0.21 13.3 0.0 1 23 1253 1275 1253 1275 0.97

18 18 0.12 12 7.7 0.4 1 23 1282 1304 1282 1304 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.7e-06	0.001	20.6	1.7	1	23	330	352	330	352	0.98
2	18	0.81	83	5.1	5.8	1	23	358	380	358	380	0.98
3	18	4.2e-07	4.3e-05	24.9	3.1	1	23	386	408	386	408	0.99
4	18	3.5e-05	0.0036	18.9	0.2	1	23	414	436	414	436	0.98
5	18	7.4	7.7e+02	2.1	0.2	10	23	502	516	494	516	0.88
6	18	0.0046	0.47	12.2	0.7	2	23	542	564	541	564	0.96
7	18	0.13	14	7.6	0.4	1	23	665	687	665	687	0.95
8	18	0.0029	0.3	12.8	0.1	2	23	696	717	695	717	0.96
9	18	0.0012	0.12	14.0	1.4	1	23	725	750	725	750	0.88
10	18	2.4	2.4e+02	3.7	0.1	1	19	755	773	755	775	0.91
11	18	2.4	2.5e+02	3.6	0.5	1	23	785	808	785	808	0.94
12	18	0.0039	0.4	12.4	2.1	1	23	841	863	841	864	0.96
13	18	0.0018	0.19	13.4	4.6	2	23	1055	1077	1054	1077	0.96
14	18	0.025	2.6	9.9	0.1	1	23	1083	1105	1083	1105	0.96
15	18	0.69	71	5.3	0.8	2	23	1113	1134	1112	1134	0.96
16	18	5	5.2e+02	2.6	0.5	2	23	1222	1243	1222	1243	0.93
17	18	0.0021	0.21	13.3	0.0	1	23	1253	1275	1253	1275	0.97
18	18	0.12	12	7.7	0.4	1	23	1282	1304	1282	1304	0.94

Sequence Information

Coding Sequence: ATGCGAAAAGTTCCATCCTGCGCCAGCAAATTAGCCTTAGAGGAAAGAGGTGCTGATAAATGCAGCATGAAATTAATTAGGAATGAAAACCTTTTCTATCGGCTTGAAAAGAATATCTTCACAAGAGAACACGACAATGTGAAGATTAAGTGCAAAGATAGCGAGACAATCTTATCAAATCCTGTCAGTCTTGTTGAGTTTCATGATtgcaaaatgacttcaacagacTTCATCGTACTGGGCTCAAATACAATCAGTGGGAAGGCCAACTGGACAGAAGTCTACGAATTACCTAAGGCCAAATATCTTTCACCAACCAACATCGATGTGACACCCTTAAATACGACCAACAAGAAGCTTGAACATTTAAAAAAGGCCTTCCAAGATGAAATTAATGGACCCGTGGACGAATCATGGCGGAACTACAGCGTCATTAGCGGTATCACACTGACGAGTTTATTGCTTATCGATTTATATTCCACCCACACGTCATCAAGCTATTCACCCTCAACATCGGAAGGAGCACTAACACCCAACTCCTTGCTACATCATCATCAACACCAACAACATCATCATTCCCAGCATCTTGTCGGCCAGCATCATCATCCGCAAGACAATCGCGACATTAATCGTCTTAGGGCGAGCCATGAACAACGTCGACTAAGACGTTTTCGTACAGCATCCACGGCAAATGGATCCCTTGCAGGGCGCGATGATGACGAAGAACCACGCGAAGAAGAGGACGATGAAGAGATGGAACACGCTGATTCCCATGACGAGGACGAGAGTGGCAACCGAACACTTGAAGGCGCGGATCCCGGTGATAATTACGACGATGATGACACCAATGAACCCCATTCGGGTCTGGGTGGCACGAATGGTGGCGGCAACATGAAAATTCCGGGAAAATTGCGAAAAATCGAGAGGGATGCTCTGAAATCGGAAAAGTCGACAGGCGATGGTATTAAGGGAAGCACGGATGGATCCTATCAGTGTCAGTTTTGTGATAAATCATTTCCACGTCTTGGCTACTTGAAGAAACACGAGCAGAGTCATGCCGAGCATCTTCCATTCAAATGCGACTATTGTGCCCGAttattcaagcacaaacgatctCGCGATCGTCACACCAAGCTTCATACTGGAGATCGACGCTATCGTTGTCCACATTGCGAAGCAGCATTTTCACGCAGCGATCATCTTAAGATTCACATGAAAACCCACGACACCCAGAAGCCATTCCAATGTACAGTTTGCAATCGAGGCTACAACACAGCGGCTGCGCTCACTTCTCATATGCAGAATCATAAGAAGCAGGCGGCGCTATTGGGATCGGGACAGAGTCTTTACAGTCCCCGATCAACCGGCTCCGGATCGAGCTCTGGCAGTTTTCACAAACGTCGCTATGCAATGACCGATTGCTCACCGTCCGGTCGTCCGGACTATCGAAAACACAGTCGTCTCGGCTCCTTGATGGCTTGCATCTACTGCACTAAATCAGACTTTACATCGTTGGAACAGCTCAATTCACACGTCCAATCAATGCACGAACAAAACGCGAGTGCTGCCAAAGAAAGTATCCTTGCAGCTTGCCCACCGACAGCAACATCTGTATTCCAACTGTCTTGCGAATATTGCACAATGAAATTCCCCAACATTCCGACGATGTTTCAACATATGCGGACCACTCACATCGATCGTTTGACTAGTCCCAACTCATATTTTGAGCACTTCAATCGGTTGGCGGCGTCGGGTACGTTCAGCCCACGACTGTTAACCAACACTGCTTTTCGCGGTATCAACAACACCGAGCTCGAGACGAAGATAAAAGTGGAACAGCCTAGTCCCAATCATAGTCGACATAGTCAAGGTGGCTCGGAAAAGGACGAAGAACAAACTTCGCCAACCGATTTGAGTCAGCCCCGGAAACGACCGACACCACAACAGCCGGATGGAGGGCATGGTCGAAACGACAAGAATGCCACCGGGGCGTTCCTATGCAACCAGTGTAATGCAGCCTTACCAGACTTTGATACTTTCCGGTCGCATCTGAAGAGTCACATCAGCCAGGAGACTTCAAGCACCGTTTGCCCTCATTGCGGCGTAACATTACGAGATAGTGCCGAACAGGAGCGACATATCATCTCGCACTTTCTGATAACAAGCAGCGAATTTGCATGCTCGTATACCAATTGCAAGAAAACGTTCACCAAACCGGAGGAACTGCAGAAACATCTTTTTGATACGCATATCCAGGTGATGTACAAATGCTCGATATGCTCCGATATTTTCGATACAAAAGTGGCCATTCAAGTTCATTTCGCATGCGCTCACTCCAATGAAAACAAGCTCTTCCGTTGTTCGGCCTGCATGGAATCATTTGGCAGTGAGAAGGACTTCTCGAATCATGTGAAGGCTCGTCATTCCAGCAACGGCTCAGCAATCCAGTGTATCTTTTGTAGGGCTGTCTGTTCGTCGGAACTGGAAATGCATTTCCATTTAGCCGCACATGCCCGCCAGTTTCGATGTCCGGCATGTCCTGAAACGTTCCACGTGGAATTTTTACTGGATCGTCATATGCAAACTCATCACACCCAGAAAGATTCAGCAACGAATGGAGTGACTGGCGGGCAACCAGTATCAAATGCACTAACACCAGCCACCGATACGCTACCAATGAATTCTTACCACGGAGCGTTCAACAAACACACCGCCGCCATcgccaataacaacaacaataatatcCTTGAATACAATGCCCTGGCGGCGAATAAATCACTGATGCAGTTCCCTGGTAACAAGTTCTATAGTCCGCTTCAAGTCGATACAAACGCTGCCGGTACCCTTGCCAAACACTCGGCCTTAATGTATGGGCTTAGTCAGCGTTATTTCGAGGCCAACAAGACCCTAATGGATATTTACAACTACAATCAGGAGAACAAGAATGTGCCTCCGTACTTTGTGAATCCTGGAAATtttgaaaccaaccgcaatccGAGCTCACTTAAGACCCATCCACCTACCGAGAATAAGAGCTCAGCTGAAAGGACTAACTCGGCTGGTTTCAGTTGTGGCATTTGTGAACGTTCGGATTTTCGAACTGAAAACGATGTCCATTCTCATCGAAAAATCGTGCACAATTTAAAGACAGGCGTAAGCCTTCGTTGCGCTTATTGCAGTGGCAACTTCAAATCGCGCAGCGAGCTGGAGCATCATATGAAAACATGTCACAATTCAACGGGAAAGCATAAATGTCTGATTTGTGACGAGATCTTCCCATCGCCTGCCGTACTCGCGGAACACAAATTGCAACACTCGAAGGTTGGACAATCGGGAAAATGCTCACATTGCTCAACAGCCCTTAACGATGTGGCCATGTTCAAGTCGCACCTTAGTGAGCACAACACCGAAGGACAGATACCTGTCCAGTGTATCTGCTGCCGACAAACATTGCACTCAGATTTCGAGGTCGGACTACATGCCAAATTTCATACAAAATCCTCCGGAAACCCCGAAAACGCCTGCGCTCTATGCCTGGAAACGCTACCAGCAACTTCAGAGTCGCGTGTCTGCGAAAAGTGTTGCCGAAAACACAATCTCAGTGCGAAATTTAACGCACGTAATTTGGACGTTAGCAGCGCCTCGCGGGCCTATGTCGAGAACCGTTGCAATCTCTGTAAGATGATTCTGCCCCATGCTCAACGTCTTCAGGAGCATTTGGTCGAGCATACGTTCGTCGGGTGCGAAGAACGTGGCTATTCCTGCTATATTTGTTCGGCGGTGTTTACAGTACCAGCAGGACTCCTGAATCATATGCTCGAGCACGGCCTACACACGCGTCCCTACGATTGTAATCTCTGCTCGGAAAAATTCTTCTTCCGCGCGGAACTGGACAACCATCTTGTTGAGCATGAACTCTTAggtcgaaatcctggtgttacTGAAAACGGAACCACTGAAACTAGTGCTAATCTGCAGGCAATTAAAAATGAACAAGTCATGGAGGCTCATAAGGAATTGGACGTTGGCATCGATAAAGCTCAACAACAGTCATCAATGCAAAATCTACTGGCGAAAGATCAGGTGAAAATTGAAACCGTCGATGATGAAGAGTCGGCCGAAAAAGGCTGTACACACGATGACGACGAGGAGGAGTATATCGAAGTTGAAAAGATCGCGGAGGGATCGGGAAATGCTAAAACCCAGAATACAGATCGCTAA
Protein Sequence: MRKVPSCASKLALEERGADKCSMKLIRNENLFYRLEKNIFTREHDNVKIKCKDSETILSNPVSLVEFHDCKMTSTDFIVLGSNTISGKANWTEVYELPKAKYLSPTNIDVTPLNTTNKKLEHLKKAFQDEINGPVDESWRNYSVISGITLTSLLLIDLYSTHTSSSYSPSTSEGALTPNSLLHHHQHQQHHHSQHLVGQHHHPQDNRDINRLRASHEQRRLRRFRTASTANGSLAGRDDDEEPREEEDDEEMEHADSHDEDESGNRTLEGADPGDNYDDDDTNEPHSGLGGTNGGGNMKIPGKLRKIERDALKSEKSTGDGIKGSTDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDTQKPFQCTVCNRGYNTAAALTSHMQNHKKQAALLGSGQSLYSPRSTGSGSSSGSFHKRRYAMTDCSPSGRPDYRKHSRLGSLMACIYCTKSDFTSLEQLNSHVQSMHEQNASAAKESILAACPPTATSVFQLSCEYCTMKFPNIPTMFQHMRTTHIDRLTSPNSYFEHFNRLAASGTFSPRLLTNTAFRGINNTELETKIKVEQPSPNHSRHSQGGSEKDEEQTSPTDLSQPRKRPTPQQPDGGHGRNDKNATGAFLCNQCNAALPDFDTFRSHLKSHISQETSSTVCPHCGVTLRDSAEQERHIISHFLITSSEFACSYTNCKKTFTKPEELQKHLFDTHIQVMYKCSICSDIFDTKVAIQVHFACAHSNENKLFRCSACMESFGSEKDFSNHVKARHSSNGSAIQCIFCRAVCSSELEMHFHLAAHARQFRCPACPETFHVEFLLDRHMQTHHTQKDSATNGVTGGQPVSNALTPATDTLPMNSYHGAFNKHTAAIANNNNNNILEYNALAANKSLMQFPGNKFYSPLQVDTNAAGTLAKHSALMYGLSQRYFEANKTLMDIYNYNQENKNVPPYFVNPGNFETNRNPSSLKTHPPTENKSSAERTNSAGFSCGICERSDFRTENDVHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAVLAEHKLQHSKVGQSGKCSHCSTALNDVAMFKSHLSEHNTEGQIPVQCICCRQTLHSDFEVGLHAKFHTKSSGNPENACALCLETLPATSESRVCEKCCRKHNLSAKFNARNLDVSSASRAYVENRCNLCKMILPHAQRLQEHLVEHTFVGCEERGYSCYICSAVFTVPAGLLNHMLEHGLHTRPYDCNLCSEKFFFRAELDNHLVEHELLGRNPGVTENGTTETSANLQAIKNEQVMEAHKELDVGIDKAQQQSSMQNLLAKDQVKIETVDDEESAEKGCTHDDDEEEYIEVEKIAEGSGNAKTQNTDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00793765;
90% Identity: -
80% Identity: -