Basic Information

Insect: Chloromyia formosa
Gene Symbol: Znf296
Assembly: GCA_964017055.1
Location: OZ024817.1:76222082-76233447[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.013 1.4 10.7 5.1 1 23 182 205 182 205 0.97

2 12 9 9.3e+02 1.8 2.4 2 15 233 246 232 253 0.75

3 12 0.27 27 6.6 3.2 1 23 385 408 385 408 0.83

4 12 0.059 6.1 8.7 0.3 1 21 415 435 415 436 0.95

5 12 3.7 3.8e+02 3.0 0.2 1 19 445 463 445 468 0.74

6 12 0.0012 0.12 14.0 2.7 1 23 486 508 486 508 0.97

7 12 3.7e-07 3.9e-05 25.0 4.1 1 23 516 538 516 538 0.98

8 12 4.5e-07 4.7e-05 24.8 1.3 3 23 557 577 555 577 0.96

9 12 1.5e-05 0.0015 20.0 2.6 1 23 583 605 583 605 0.99

10 12 5.9e-06 0.00061 21.3 1.7 3 23 613 633 611 633 0.96

11 12 2e-07 2.1e-05 25.9 1.6 1 23 639 661 639 661 0.99

12 12 0.0091 0.94 11.3 0.0 1 23 667 691 667 691 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.013	1.4	10.7	5.1	1	23	182	205	182	205	0.97
2	12	9	9.3e+02	1.8	2.4	2	15	233	246	232	253	0.75
3	12	0.27	27	6.6	3.2	1	23	385	408	385	408	0.83
4	12	0.059	6.1	8.7	0.3	1	21	415	435	415	436	0.95
5	12	3.7	3.8e+02	3.0	0.2	1	19	445	463	445	468	0.74
6	12	0.0012	0.12	14.0	2.7	1	23	486	508	486	508	0.97
7	12	3.7e-07	3.9e-05	25.0	4.1	1	23	516	538	516	538	0.98
8	12	4.5e-07	4.7e-05	24.8	1.3	3	23	557	577	555	577	0.96
9	12	1.5e-05	0.0015	20.0	2.6	1	23	583	605	583	605	0.99
10	12	5.9e-06	0.00061	21.3	1.7	3	23	613	633	611	633	0.96
11	12	2e-07	2.1e-05	25.9	1.6	1	23	639	661	639	661	0.99
12	12	0.0091	0.94	11.3	0.0	1	23	667	691	667	691	0.93

Sequence Information

Coding Sequence: ATGTCTATTGTGGAAGTGGTAAATCTGAATTTGAATAGTTTGTGTCGGACATGTTTAATGCACAGTGATAGTATGAACAATTTGGACGGGATCGTTGAAAGTGTTCATATGTCGCTTAAGGAGTTGCTGTCGGCGTGTTCGCAGGTAACGGACTTCAAAATAACGCCGACATTCATTTGCATCGATTGCACCGGTCAACTGATAAATGCCtataatttcaaaataaaatgtgAAACCAGCGACAAAGTCCTCAACAGTTATATCAATGAAGTCAAAAGTGTTTCCCAACCGATAGTCATCAGTGACAGCTATACCGACGAAGTTTCTCAAGACCCAATCGATATTTCCGTAAATTTATCGAATATCGAACTGCCGCAGGATCGATCAGGAGTAATATTATCCCAGGCGGAGTTACGACTTAGCCAGAGCGAAATTGGCGAACCGGATGACGAGGATCATGCCGATAGCAGCCACTACGATGAACCTAAAGATAATAACGAAAAGGGCCAAGATCAGATTGTTGTCGTGGACGAGAAAGGCAAGCATCGATGCGATATTTGCAAAAACCTTTACAACCATAAGAAGTCGTTGACCCGACACATTAACAAAGCACACAGTATTGATAACTCTAAAACGTGCAAGAAAGtCCGTTCTAAGAGAAATCCACCTGAAGTATCTGTCGATGATTCTGGTTTGAATTGTAGCCTATGCGGGGAAACATTTGAAACGGGTGAAAGTTGTAGACTTCACAAGTGCACCGATATGATCACCAGATCGGGCCGGCGAATTTCAAGGGCTAAGCCCAACGTTGGAATAGACACATTTTTCTGCCTACCCAATGGATCAAAACGAATAGAATGTAAAATATGTTCTTTAAAACTATTGACTATACCCAAACTGAGAAAACATTTGGACGAGCATGCTTCGAACAATGCCGCCCTGCAGGTGAATTTAAGTCAAGATTTGAAAGCCAGTCTCGTCCTATCAAATGTAAATAGTCCGGAGGAAGTCCTCGAATATATCTCAAATAGCCTTAACGAaggcaaattttcaaaattctattccATCGTTAACGAAACGGGTAACGAATTGTCGATAAGCGATTCTGAGACTGAATCTGATTCGGACGATAGTCCCCATCCACACAACACGTATCAGTGTGAAATTTGTCTCAAGTGTTTCGATCGACGCTATAAAATCCTGTTCCATCAACAAAACGATCACACCAAAGAGGAATTGGTGTACCAGTGTAAGAAATGTCTTTGGCAATTTGGCAATTCTCAACTTTTAGACGATCACCTGAAATCAATGTGTGAAAATGAGGATAAGTGCTTTGAGTGCAACGAATGTAGCATGAAATTTATGTGGAGAGAGAATGTGTATGCCCACGAGACGGCCCAACACTACCAGGCCACAATGAAAAATAGCAAGAAAGCAGTGGTGAAGGATAAGCAATTCGTTTGTGACGTGTGCAGTAAAGCATTTTTTCGCCAAGAGCATTTCGATCGGCATAAAACGGTCCATTTACCGCATCATCTTAGACGATTTGAATGTGAAACTTGTCACAAACGATTCAATCGTCGAGATAATCTGCGTTCGCATATGCGAGTGCATGATGGTGGAAAACGTGCTGCACGCGATAAGGATGAATCCGAGAACACACATTTGTGCGTTTATTGTGGTCGTGGATTTACGAACTCGTCGAATCTAATCGTTCACATGCGACGGCACACAGGCGAAAAACCGTACAAATGCGATCTATGCGGTAAGGGGTTCCCGCGATCGTCAGATTTAACATGTCACAGGCGAACGCATACGGGTGAAAGACCACATTTGTGTACGGTGTGCGGTAAAGGCTTCTCGCGATCCAACAAGCTTGTCCGACACTTGAGAATTCACACCGGGGTTCGTCCCTACAAGTGCACCTACTGTGATCGTGCATTTACGCAATCGAACGATCTAACGTTGCACATTAGACGACATACCGGAGATAAACCATACGTTTGTGGAATATGTGGCGATCGATTCATTCAAGGTACGGCTCTGCAAGCTCATCGACGAATGAGAGGACATTATGAGGATCCTGATCAGACGGCCCCGTTCGCCAACATGAGTATGAACAATCCAAATCGTTATAATTCACAGAATCGTGTCAATCGTATTGGTTCACCGAAACAAGAAACTGCCGAACCGACCGAAATTAAGCCAGTAGGCAGGTCTTGTATTCCCAGCATGTCAAGTTCAAGTAGCAATAGTAAAAGTGTTAGTGTAGTCTCGACAAATAATATAATGGCGACAAATGGTGACAATCTGAGTGATTGTAATATAATAAGTTTGGTACCAACTCAAATACAAGAATACCTGACCGTCCCGGGAATATCTTTGGGTGGTTTGTGTGTGGATCGGAATGACGCCGACGGGTGCATTTCGATCGAAAACTGGAGGAAGGTTGAAGGTAAATTAACTTTAAACTTCCTCAAGGTACTGGAAGCTTATCCAGGACCGCTTCCGGAGTGCAAGGACGGAGGTTGGTTCCTTGGTAGGAAGCTGATGAAATTTGCGGATCAGCGATCGGCTGATCTTTTTAAGTTCGCCATTAACTTGGCGGGGGAAATTTGGCCAGGCTCTAAGTTGGAGGTTGTAAGGAGGGAGGACATCCCATCTCGACCCAGGGCCCGGGCTCGACTACCGCACTATGTCTCCAATGGGGAGGAAGTTATGACCCTCATTCGCAAATGTAATGCCCACCTCCCGACAGAGGACTGGAGGGTCGTCAAGGTGGAGGAACCAGTGGGCGATTCCAGATGCGCAGTCTTTGTGCTAAACACGGAATCGCTGGCTCCTCTTGCTAAAACCAATGGTGTCATTAAACTGGGCTGGTTCAGCATTAAATTGCTAGTATACAAAGGCGATTTAAAGAAAGCTGGCTTAACAACATCTACTCCCATGGAGGAGGATGCAACTCATGTAATGGAGGAGGAGGACGAGACTCAGGAAACGGAGACTCCGGCTCTTTCTGTTTCAAAAACCGTAGAGGATGACACTGATGGGGAATGTGTATCTCTCGGATCCGACCTAGTTGCTTTGGATGATACATCGCAGCCGTCTTTCGCGTACGATCTCTCTGAATCCGATACGGAGGATGAAGCGAACGCCACGGTGATTGAAGGGAGAAGTTCACCTAAAACATGTTAA
Protein Sequence: MSIVEVVNLNLNSLCRTCLMHSDSMNNLDGIVESVHMSLKELLSACSQVTDFKITPTFICIDCTGQLINAYNFKIKCETSDKVLNSYINEVKSVSQPIVISDSYTDEVSQDPIDISVNLSNIELPQDRSGVILSQAELRLSQSEIGEPDDEDHADSSHYDEPKDNNEKGQDQIVVVDEKGKHRCDICKNLYNHKKSLTRHINKAHSIDNSKTCKKVRSKRNPPEVSVDDSGLNCSLCGETFETGESCRLHKCTDMITRSGRRISRAKPNVGIDTFFCLPNGSKRIECKICSLKLLTIPKLRKHLDEHASNNAALQVNLSQDLKASLVLSNVNSPEEVLEYISNSLNEGKFSKFYSIVNETGNELSISDSETESDSDDSPHPHNTYQCEICLKCFDRRYKILFHQQNDHTKEELVYQCKKCLWQFGNSQLLDDHLKSMCENEDKCFECNECSMKFMWRENVYAHETAQHYQATMKNSKKAVVKDKQFVCDVCSKAFFRQEHFDRHKTVHLPHHLRRFECETCHKRFNRRDNLRSHMRVHDGGKRAARDKDESENTHLCVYCGRGFTNSSNLIVHMRRHTGEKPYKCDLCGKGFPRSSDLTCHRRTHTGERPHLCTVCGKGFSRSNKLVRHLRIHTGVRPYKCTYCDRAFTQSNDLTLHIRRHTGDKPYVCGICGDRFIQGTALQAHRRMRGHYEDPDQTAPFANMSMNNPNRYNSQNRVNRIGSPKQETAEPTEIKPVGRSCIPSMSSSSSNSKSVSVVSTNNIMATNGDNLSDCNIISLVPTQIQEYLTVPGISLGGLCVDRNDADGCISIENWRKVEGKLTLNFLKVLEAYPGPLPECKDGGWFLGRKLMKFADQRSADLFKFAINLAGEIWPGSKLEVVRREDIPSRPRARARLPHYVSNGEEVMTLIRKCNAHLPTEDWRVVKVEEPVGDSRCAVFVLNTESLAPLAKTNGVIKLGWFSIKLLVYKGDLKKAGLTTSTPMEEDATHVMEEEDETQETETPALSVSKTVEDDTDGECVSLGSDLVALDDTSQPSFAYDLSESDTEDEANATVIEGRSSPKTC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -