Cfor035227.1
Basic Information
- Insect
- Chloromyia formosa
- Gene Symbol
- retn
- Assembly
- GCA_964017055.1
- Location
- OZ024818.1:8423040-8468588[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7 2.5e+04 -3.1 0.1 72 81 143 152 123 153 0.48 2 2 3.5e-21 1.9e-17 64.6 0.0 2 79 160 235 159 236 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGTCATCATCCACCGTTTCCCCAAAGTCACACATTAGGCTTGCTTGGTAATTTCATGGGTGTTCCTGGTCTACAGAATCTACCAAATTTACAACATGGTGATGTGCTGGAGAAACTGAAGATGCAAGTTCGAGATATGAAAGTGGGAATGATGGAACAAGATTATACACCACACAGCACATATGGCTCGACTCTACCACCAACAGGTGCAACGGGCTATCCACTTTCGCAGGTTAACGGTCTAAGCCAACCGCAGAATTTATCGCAAACATCAAATTCAGTTTCACATTCAAACGGATACCCGTTTGCATCACCTAACAATAATGTTCCAAACACCAAAGATGCGAATCCCAGCTCAAATGCGTCTAGTTCCAGCGAGGCTTCAAATTCATCACAACAAAATAATGGCTACAGTTTCGAGGAACAGTACAAACAAGTGAGACAGCTCTACGAGATTAACAATGATCCGAAGCGGAAGGAATTTTTGGATGATTTGTTCTCATTTATGCAGAAAAGAGGGACACCAATAAATCGTCTTCCAATAATGGCCAAATCCGTGCTGGATCTCTATGAACTGTACAATTTAGTTATAGCTCGCGGAGGCCTTGTCGATGTGATAAACAAGAAGTTGTGGCAAGAAATTATTAAAGGCTTACATTTACCCTCTAGTATAACGAGTGCTGCATTTACATTAAGAACACAGTAA
- Protein Sequence
- MGSHHPPFPQSHTLGLLGNFMGVPGLQNLPNLQHGDVLEKLKMQVRDMKVGMMEQDYTPHSTYGSTLPPTGATGYPLSQVNGLSQPQNLSQTSNSVSHSNGYPFASPNNNVPNTKDANPSSNASSSSEASNSSQQNNGYSFEEQYKQVRQLYEINNDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -