Cfor012574.1
Basic Information
- Insect
- Chloromyia formosa
- Gene Symbol
- JARID2
- Assembly
- GCA_964017055.1
- Location
- OZ024814.1:91399945-91418040[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-22 2.1e-18 67.7 0.0 7 89 1453 1533 1448 1533 0.93
Sequence Information
- Coding Sequence
- ATGATCGTCCTATCTTCGAGCATGAATATAATATTCAGTTCTGCCCGAACAAAAGTTCAAGCTCAGCGGAAATTTGCTCAGGGTCAAGGCAACCCGTCAGCATCGTACTCCCTATCAAATGTGATAGCTGCAAGTAGTTCCCAGCCAAATACTCCGATCCGCGAAAATAAGGAGCCAATACCAGAACTCATTCCCCACAAGAAACCAAGTGCCGAAGATTTGGTTACATATATTTGTTTTCGTGGTACACCCGGCTTACCACCTCATTTGgattttttcaatcaaaataataaaagtGCCGATAAAGACGACAAGAAGGATAGTAAGAGCGATGAAGCTGCAACTAATGATGTGAGCAATAATAGCAAACCGGGAAGTAAAAAGGGCAACAAAAGCACCGCAGAGAAAGCCGAGAAAAGTGAGAAAAATGGTACagttgaaaagaaaaatgataAGAAAGCGGCCGAAACTGTGGAGAAACCTGAAACTATCGGTTATGCGGCAAGAAAGAGAGCTGATCAAGTAGTGGAGGgaaatcgaaaattcaaaaataccgAACGACTCACAAGATTGCGAGACAGGACACCAAAAAAGGCGGAAACGAATCGCAGATCGCCAAGAACAAGATCCGCCTACAAAGCGGAAAGTGAAGAAGATGAAGTCGAAGAAAATGAGGAGGACGATGGCGAAGATGAAAACGATGCGAGCGTAGTATCAGAATCTAAAAAGACCCCTGTGAAGAAAACTCCTGTAAGGGGAAGGCGAAAAACCACTACTcccgctgcaaaagaagatgAACCGAGTGTTGCCGAAAAACCGACGGAAAGTGATCTAGACACTTCAACTCCTGTTTCGAATCTTCGGAATAAGCGTGGTGCCAAAGTGCCTCCAACACCTGAACGGAAAATTATTCAGAATGAGAAGAAGGCGACACCAACACCTGAAAAAATATCGGCACCTACACCGGAAAAGAATGATAAAAGGGCTGATTCAGTGAGCAAGAAATCAGATATCAGTTCGAAAATCTCCAGCAAAGGCGGCAAGAATACTCCGGTCAAACGCAACCTCAAAGAAAAGGCCAAACCACAACCACAATCCGAGAATGAGGAAGAAAATGCTGAAATCACTCCGCCGAAGCCTAAAAGAGGCAGGAAATCCGCCGTGCCCGACACATCAAAAAAGTCACAAGTAGAAAGTTCGCTGCGATCGGATAATAACACGCCGGAATGCGAAAATCGATCGGCACGTCCAATGCGTAAGACCAAAGAAGCAGCCACAATTTATATGGAGTGGATTGGTCTCAAGCTGAATTTAGATGATGATGGTTCTTCACTTGATAGCTTTCCTGAATTGCCGAATGCTAAAGAAACTCAAAAGATTGAGAACGAGCTGAAACAGAACAGTTTGAAGGCAAAGTCTCAACCGAAACCGACACCAACGAAGAAGAAAGGCGGCAAAGCGAAAGGAGCTACTCAGCCGAAGAAGAATAAGAAAGAGACAACACCTAAAGTAGAAGAACCGGAGATTCAGGAAACTAAGGTCGAGGTGCAAAGAAGTGAGGAAGTAAATGACAAACAGCCCAGTAAAAAGTCTAAAGTAGACGAATGTGTTGTGGAAAAAGATGGGAGATACTTTAGCGATTCCGATGACGAGCCCCTTATTGCTCAGAAAATTGAAGTAGAAACTAAACCGCcgccaaataataaaaaagggaaaccgattaaaaaaaaaggtatggGCACGCCAAAGGCCGCTGCTAAAAAGAAAAACGTTACGTCCCAAAAGAAAGAAGAATCTGCTCCTGATGAACCGCCAAAGGGCGCCAAGTCAGTCATCGAAGATGTGAAAGAATGTTTAGTTGAATCACAGCCAGAAGTGGTTAAAGATTCAAAGCTTGAAAAAAGTTTTAGTGATTCCGATGATGAACCATTAGCAACAAAGCTGGTTACGAAACAACCCGAAAAGGAATTAAAGTCGGAGCCAGAGCCACTTCAAATAATTACGGAAATTACTCCAATCACACTACCCAAAATAAGTCCACCAAAAGATGAGAAGCTCGCATCACCCATTAAACTTGCTCCGACTCAGAATACTCTCACACGGCTAGAGGAAAGATCATTTATGAAAGGTCCTACATCACCAAAATATCCAGTCAATAAACCTCCGCAACCCGTTACTCTTTCTGTTCACAGATCTGAGCCGGTAACCCCACCAGGCCAAGTAATACAATCTATACCGGTTATGACTCCTCCTGGTCCTTTTAGTCCGCTAATGGAAAGGTTTCCCTCGCCAAAAGTGAATCCTTCGTTTTTAACTCCAAAATTTGATCGAAATTTGGACAGAAAACTATCCATGGAACCCATCACATCACCAAAAAATAATTTACCATCACCCTCAATATCGAGATTAGATTTTTCGAGCAGTAAGCCGGCCTCGCCCAGTGGCAGCCCAGCCAACACGAAAAAAATCGAGCCTGATTTGATATCGGCAGCGAACCTCATGCCTAGCAAAGAAGAGTCCAGTAAGATTTTCGGAATAGCTAGTGTTAGTCTAGCCCAGAGCTCAGGTCCTGATAATACTAAGTGCACACTCGGTAAATGTGGCTCAATACACAAGCCCGTTTTAGGGCCAGTAGTGCCTACAGAAGCATATTTGGGGGAACCGTTATCGAGTAAAGAGCGACGAAAAGCAAAGGTCAATATGACACACGAACAGATTCAGAGGTGGCTGATTGAATGTTCCTCAAATCCAGACGATATTCAAGATGATTTAGACGATGACTTTGATGAGCCCCTAAAACCTAAGACATTCGCTCCCACTCCTCCGTTAATTCGCGAGGAAAAAGATTCGGGGTCGTTATCTTCAAAAACTGGCAAAGAAGTTCGAAGTGAAAGCACTTGGTCTGGTAAAGGTCCGTCGCTGAAAGCAACTCCGGTAGTCGTCAAGGAGGATTCCAGGGAAAGACCAAGTTCTGTTCTTGCAACAGATATGAGTAAGCATGATTCGTCATTTGAAAATAGAGCCTCACCCAAACCGCAAAAGATTTTTGGCGCCGTGACAAAGGAAAAAACATCATCTCCGACCACGACCCTTAAGAAGTCAGAATCAATTTCGAAGACTACCCCCGATAATGTAAAATCCCCTAAACCCTCGACGTCTTCAGCAACGTCATCCCCAAAGCATCTCAAAAATGTCAAGGCGGCACCTAATGTCTCTCAAAAGAAGCTTCCCATGCCAAAACGACAACCGGTCTACAGCACGAAGCCTGTTCCATCCGACGTGAATAAGAAAAAAGTCTCGACCAATAGCTTTTCTGCCTTCTCGCCCGAAAATGAGACGAGTGTTTATTCTTTCGACAAGGAAGACTATGTACCTCCTCCAGTGGCCAAACCATTCAGGCGTCACAGTAGACGTGAATCGAACGCTGATGAGAACACTTCAAGTGAAAAGCAAACCAAACCAGAAAAGGGGTCAGCGAAGGAAGCACAACAGAACAGCATATCTGTTATGCTGAGCCCGGAGGAAAACACGAAGTCGATTAAGGTCAGTCTCGAAAATACAGATGCGGTTGCGGCCATCGCGAAAGCTGAAAAACCAAATGCGGATAGCTCTGCGGTGGGTGACTCGGACTCTGAAGGTCACACCTTCTACATACCTCTACAGGGAACTGGTGCAACCGCTGCTAATGCAGGCAAGACCGATGTGATACAAGGTGTGGCGGTGAAATTGGGACGTGAAGGTCCCGAAGGTCCTAATCAACGAGTTATTATGCACGCAACACTCGTGACAAAAGCCCAAATGGGATCAAATACCACTCCTATTCCGGATTCAATGAATGTTCATGAGATCGTTAAGAATCTCCTGTCATCGAGCAAAGATTCCTCCGTAGCGGCGACGACCTCTAAAAGTGTGCCAGTCGGAACAGTTCAACCACGATTTAAGTCAAATGCTGCTGAACCTTCACAAAATGCTTCGGGTTCAGGTCTCACCAGGGTAAATTCGAACTCGTCTCTACTGTCGGGTTCGACAAAATCGAAGCCCGCTCCACCGGCTCCAAAGAAGCCAAAAGATACAACGCCCGTGAAAATGTCAAACAATACAGCATTCCCGCGTCGTGATGATCCAACACAGATGGTCGAGGCCCCGATATTCCGACCTACAGATAAAGAGTTTCAGGACCCCATGGAGTTTATTGAGAGGATCACACCAATTGCAGCGCGTTTCGGCATTTGTAAAATTATCCCGCCCGACAGCTTCAAACCAGAGTGTCGCGTTTCCGATGACATGCGGTTTACGGCATACAATCAGTACGTGCATAAAATGCTGCATCGATGGGGACCTAGTGCAAAGGAATTTAGTGCAATTAAAAAGTACTTGGCAACTCAAAGTATCGCAATGACCCATCCGCCTTGGATTGGGGGCATGGAGGTGGATCTTCCACGCCTCTATCACACCGTTCAAGAACTTGGCGGCCTTAAGGAAGTTATTGAGAAAAAGAAGTGGGCACGAGTTGCTGAAGAAATGTGCATTCCGAAATTAGCTCAGGATAGAGTAACAAAATTAGACGATATTTACTGTAAATATCTACTGCCATATGATACACTATCACCCGCGGAGCGACAGAAATTATTTGATGAAGTTGAAGCCGATTGGGCGAAACGTGAAGCGAGAGCACGAAGAAATGCCGATCGTTGTGTTAATTTGGAGAACATCAGCAACGAAGATGGAGAGTCGAGTGAAAACGATGACGAATCGGACGAAGAAGTTGATGGTGTATCGATGGAATGCATTGTAAAAGGTAGAAGTATGCCGTTAAATGCATTCTTCCGGATAGCTCGAAATACAATGGCATTGTGGTTCAAAAATACAGAGCCAACAGTCGCTGACATCGAGGCCGAGTTTTGGCGACATGTAGCTGTGCGTGATAGTCACGTGTGTGTTCACTCAGGATCAATCGATTCGAGTGGTTGGGGCTACGGATTCCCAACGCCGGGACCAAAAACCAAAGGCTCGACCTGCGCGCGACACCCGTGGAATTTAAAGGTGCTTACAAATAATGCGGGATCAGTGCTGCGGTCGTTAGGTCCTGTGATGGGCATCACTGTGCCCACACTGCACGTAGGAATGCTGTTTAGTGCATGCTGTTGGTATCGCGATCCACACGGTCTTTCTTGGATTGAGTATCTGCATACGGGAGCCAGTAAAATTTGGTACGGAATTCCAGACGAACAAAGTTCCAAGTTCCGCAAGGCTCTTACATCACTTATTCCCACGCATTGTCAGAACAAGACGATTTGGTTGCCGTGTGACACGGCCATGGTGCCACCACACATGCTAACAGATCGTGGTGTTTCACTGTGTCGTGTGGAACAAAAACCGGGTGaatatgttgttgttttcccccgGGCGTATACATCGAGTATAGCCACCGGATATGTAGTCTCAGAAAGCGTGTATTTTGCGACAAGCTCGTGGCTCGATTCAGCGAAGGATGATTTCAGGGATATTCATGAAAGTTGTGAGCCTGCAATGTTCTCCTTGGAACAAGTACTATTCGCGATATCGAACGATCAACGTGTATCGGCTGATAGTATAACACAGATTCTCCCAATGCTATCGGAGGTTTATGATAAGGAAGTGGCTGCACGGCAGCAACTGAAGGCGGCCGGACTAACACAAACGGAACGATTCCAACAGCCTGTTGCAAAGACCAAACAAAAAATGCAGGTAGTAGAAGAGCACGAATGCGATTTGTGTCGAGCGAATTTGTACATATCAATGGTTAGAACAACTGAGGGGAACATTTACTGTTTGCAACATGCTCTACGTAACATTAATAATGGTAACATTCAAGCAAAACAATGTACACTAATATTTACGTTCGATATCGAAGATATCGAGAGTTTGATTAAGAAAACAAAAGATCGCTTAAGTCAATCACATAAGAAGGGAGGTGGTAATGGATCGACAAGTAAAAAATCTAAATAG
- Protein Sequence
- MIVLSSSMNIIFSSARTKVQAQRKFAQGQGNPSASYSLSNVIAASSSQPNTPIRENKEPIPELIPHKKPSAEDLVTYICFRGTPGLPPHLDFFNQNNKSADKDDKKDSKSDEAATNDVSNNSKPGSKKGNKSTAEKAEKSEKNGTVEKKNDKKAAETVEKPETIGYAARKRADQVVEGNRKFKNTERLTRLRDRTPKKAETNRRSPRTRSAYKAESEEDEVEENEEDDGEDENDASVVSESKKTPVKKTPVRGRRKTTTPAAKEDEPSVAEKPTESDLDTSTPVSNLRNKRGAKVPPTPERKIIQNEKKATPTPEKISAPTPEKNDKRADSVSKKSDISSKISSKGGKNTPVKRNLKEKAKPQPQSENEEENAEITPPKPKRGRKSAVPDTSKKSQVESSLRSDNNTPECENRSARPMRKTKEAATIYMEWIGLKLNLDDDGSSLDSFPELPNAKETQKIENELKQNSLKAKSQPKPTPTKKKGGKAKGATQPKKNKKETTPKVEEPEIQETKVEVQRSEEVNDKQPSKKSKVDECVVEKDGRYFSDSDDEPLIAQKIEVETKPPPNNKKGKPIKKKGMGTPKAAAKKKNVTSQKKEESAPDEPPKGAKSVIEDVKECLVESQPEVVKDSKLEKSFSDSDDEPLATKLVTKQPEKELKSEPEPLQIITEITPITLPKISPPKDEKLASPIKLAPTQNTLTRLEERSFMKGPTSPKYPVNKPPQPVTLSVHRSEPVTPPGQVIQSIPVMTPPGPFSPLMERFPSPKVNPSFLTPKFDRNLDRKLSMEPITSPKNNLPSPSISRLDFSSSKPASPSGSPANTKKIEPDLISAANLMPSKEESSKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEAYLGEPLSSKERRKAKVNMTHEQIQRWLIECSSNPDDIQDDLDDDFDEPLKPKTFAPTPPLIREEKDSGSLSSKTGKEVRSESTWSGKGPSLKATPVVVKEDSRERPSSVLATDMSKHDSSFENRASPKPQKIFGAVTKEKTSSPTTTLKKSESISKTTPDNVKSPKPSTSSATSSPKHLKNVKAAPNVSQKKLPMPKRQPVYSTKPVPSDVNKKKVSTNSFSAFSPENETSVYSFDKEDYVPPPVAKPFRRHSRRESNADENTSSEKQTKPEKGSAKEAQQNSISVMLSPEENTKSIKVSLENTDAVAAIAKAEKPNADSSAVGDSDSEGHTFYIPLQGTGATAANAGKTDVIQGVAVKLGREGPEGPNQRVIMHATLVTKAQMGSNTTPIPDSMNVHEIVKNLLSSSKDSSVAATTSKSVPVGTVQPRFKSNAAEPSQNASGSGLTRVNSNSSLLSGSTKSKPAPPAPKKPKDTTPVKMSNNTAFPRRDDPTQMVEAPIFRPTDKEFQDPMEFIERITPIAARFGICKIIPPDSFKPECRVSDDMRFTAYNQYVHKMLHRWGPSAKEFSAIKKYLATQSIAMTHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRCVNLENISNEDGESSENDDESDEEVDGVSMECIVKGRSMPLNAFFRIARNTMALWFKNTEPTVADIEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPTPGPKTKGSTCARHPWNLKVLTNNAGSVLRSLGPVMGITVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKIWYGIPDEQSSKFRKALTSLIPTHCQNKTIWLPCDTAMVPPHMLTDRGVSLCRVEQKPGEYVVVFPRAYTSSIATGYVVSESVYFATSSWLDSAKDDFRDIHESCEPAMFSLEQVLFAISNDQRVSADSITQILPMLSEVYDKEVAARQQLKAAGLTQTERFQQPVAKTKQKMQVVEEHECDLCRANLYISMVRTTEGNIYCLQHALRNINNGNIQAKQCTLIFTFDIEDIESLIKKTKDRLSQSHKKGGGNGSTSKKSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00999358;
- 90% Identity
- -
- 80% Identity
- -