Cv-a015881.1
Basic Information
- Insect
- Chloroclystis v-ata
- Gene Symbol
- grn_1
- Assembly
- GCA_963691955.1
- Location
- OY829906.1:3874729-3879389[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.039 94 3.1 0.5 14 30 13 24 10 30 0.73 2 2 1.5e-19 3.6e-16 58.9 8.0 1 35 69 102 69 103 0.97
Sequence Information
- Coding Sequence
- ATGCTGATAGGCGGCTATGTGTGCGTAGCGTGGCGCCGCGTGTGCATGTGTGCAGCCTGTGTTTTCCGGATACAGATTCGTGTAGTTATGTACCGAGGGCTCCTTCCGGGTGGGATAAATTTCGCTTGTGTTGGCAAATATATGAGGGGCCataGCTATCATCCACAGTCGTTGCAgagcgcggcgcggcgagCGGGCACCTCGTGCGCGAACTGCAAGACCACCACCACCACGCTATGGAGACGCAACCAGAACGGCGAGCCGGTCTGCAACGCGTGTGGACTCTACTACAAACTGCATAATAAGCTCAATCTTAAAGATAAGATTCGCGTTGTGTTCGTGGTACAGCGGAAATTGCAAAATGGATGA
- Protein Sequence
- MLIGGYVCVAWRRVCMCAACVFRIQIRVVMYRGLLPGGINFACVGKYMRGHSYHPQSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNKLNLKDKIRVVFVVQRKLQNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -