Cv-a010252.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chloroclystis v-ata
Gene Symbol
-
Assembly
GCA_963691955.1
Location
OY829902.1:1169282-1178259[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.36 25 6.0 0.2 2 21 1716 1735 1715 1736 0.87
2 7 9.1e-05 0.0063 17.3 1.2 2 23 1906 1927 1905 1927 0.95
3 7 0.00019 0.013 16.3 2.8 1 23 1946 1968 1946 1968 0.97
4 7 0.0059 0.41 11.6 4.2 1 23 2025 2047 2025 2047 0.98
5 7 0.18 13 6.9 6.5 2 23 2072 2093 2072 2094 0.94
6 7 0.053 3.6 8.6 1.4 1 19 2123 2141 2123 2143 0.96
7 7 3.2 2.2e+02 3.0 0.3 5 23 2497 2516 2494 2516 0.91

Sequence Information

Coding Sequence
ATGGATAGAGTGAACCAGTTGCGCGGCGGAGCTGGCGGCGGCGCCAGCGACGGCGGCGACGCCACGCACGACGAGTCGGCCGCCCCGAGCGAGGCCTTCATGTCCGCTGATGAAAGCTCCTCCAAATACTTTTCCCTCTCTGACTCCACATTTGACATCACCCCCATCAAAGATGTCTCCTTGGCCTCTGCAGCTTCCAACGAGGCCGACCACACTATGACAGATGACCTAATTTCCAATTTATCCCCCATCACCAAAAAGGATTCTATGCTGGACAGCTTCAAGATAGGCAAGCAAATTGAAGCAGCTAATATTCTGTCTGGAGGAGTTAATATTTtcgatgataatgataattcaTTTGATGGTGATGAGTTGGTGATTGATGATAATGTTGATATGGAAGAAAAGATGAGCCTTGAAAAAGAGGCACATTTGGATGAAGAACCCGAGGCTGGCTTAGTGGAGAGTGCTGTGGATGTAGCCAGCAAAGATACGGAGGTAGTCCTCCAGATAGATGGCAAAAATGTAGATGCAATTGATATTGGGAATGGGCTTTACCTGTATAGGAAAGTAGGACAAGAAGAATTGGCTGCAGTTCAAATAATTACGGAGGAGAACCAAGCACCAACATTCAAGTTCCTGAAAGTCCGtGAGAATGCTGAAGGCAACTTAGAAGTGTATGAAGAGTTTGAAGTGGAAGTCTCCAAAGATGTGCCTTCGAAGGAAACTATGTCAACCAAGAATACTCCACATGTGCCTAATAAAGATGTTAACAAAGGAGCAATTAAACCAACAACCAACCAAAATGTTGAAAAGATAGTTAAACCCACTACTCAAGAAATATCATCAACATCAAAAGTTGAAACACAAAGTGAAGTAAATGAAgccgaatccaaaactgaagTCAATTTCAATGGgaaaatgatgaaaataaatgaatcaagAAAATCGCCTGTTGTAGGCAGCTACACTCCAATGACATATCATTCTACTCCAAATAAAGAAGGAAAACCACTCACGAAAACAATGGTTGATCAACAGTTACATCCTAGCAGGCATTCTGATAACGTGAAGAAAACTATTGAAGTTCATACAGATCAAAAGAAACAAGCGAATGAAGATACTAAACTCAAATTAGAATCTGCAGCAGACAAAGATGGTATTACGCAAACTATTGACAAACATGTTGATAAATTAGTCGAAGTATCTCAGAATAGTCAACACATTAAAGATTCCAATatagaagaaaaaatcttattaGATTCCGTACCTGAAGCTACAGTTGACATAGTTGTATCTTCCAGTGTAGATAAGATTGACCCTGTTGTTGAAGTAACATCAGAAACACCAGTTCCAGCATTAGAAGTTGTATCAAATGACATGCTGATTCCTCCTGAAGAAGTTATTTCTCCAATACTACAAGGCGTAAAAAGCCCTGAAAAGTCTTTTCcagatttacataaaatctGTTCCATACCAAAAGTTTCTAATATATCTGAGAAATCAGAAGCAGCTAGCTCAGGCATCATATCAGAGAAACTATCTTCAGCAGTTGAAGTTTCAGATAACAGTTTGAGTAATGATGATCATGTCGAGCCAATTACAAAACAAAGCATTGCAACAGAAGATGTAAGAAAGGAAATAAAACAAGAATCTATAAGTAGCACATCTTCAGTAGATTTAAAATCTAAAGATAAAAAGGAAGATGTGAAGCGAATCTCTTCTGTCACAGATTTTAATGATGCTGTAAGTAGCACATCATCAGATCAGAGTAAAAATGTTATTCCTGTGATCCTACTCAATGAATGTAAAACAAATAACGATAATATAGTTGAAGAAAATACAGCCACCATATCAAATACTGAACTTCCAGAGTCAGCCAAACAAGAAACAGTTGACGATAATAAAACCTCAAGTAATGTGAATGTTACTCTACCAAAGCAAATCAAATCTCAGGTCACAGAAAATAAGGCTACAATAATTGAATCTGAACCATCTGAATTAACGAAACATGAAAAAGTTGAAGATATTAAAACTACGAGCCTACCACATGGATCTCAAATTCAActgttagaaaataaaaccagcttattaataaacatagaAACAGATAAAACTGAAGATCTTAAAACAATATGTAGTACATCTGAACTATATACAGATTCGGAAGATAAGAACTTGTTTGAGGAAGATACAAAGCAGAAcgtgaaaataaatttgtcaGATTCGAAAAAAGAACCAGGTAAAATGGTAGAGAAAATTGAATCATTGACAATAACATCTCCGAAAATTgagagtaaaataatattaccaaCAAAAGAATGTATTGAAATTAGTAATACAAATCAACCTAAAGTTTCTTCAAATATTGAAGATGATACTGATTCAAAAAAAGATGTTAACCCTAAATCAATTGATAGTGATGTTCCTGTCACACCGGATTCtaaacaaaatgtatgccaAACATATTCTGTTGACCAAATAAGTAAAGATTCTAAGCCTGGTGAGACAGTAAATTCTGAAAAAGAAGCATCAAAGCCTATGCCTATAGAAAAGGTCattgaaaacaaaatgaatCCAACAATTATTTcaccaattaataaattaattcaagTGCCTCAGGGAATGAAACTCAAAATAGTCCCCAAAGCAGAAAGTTTAAACactgttttgaaaaaaattgaaCCAACTCCACTTATGCATACTGGGGTAGCTTTAGCTGCGAAACTAAATGAACCTAAGATATATTCTAAAACCGATAAACTGATTCCTGTATCTGCAGGAATTGAGCCTAAAATTATCTCTAAAGTTGAGCAGCCAATCACAAAGggatttgaattaaaaacaatatcaaAAACGGTTCCTTTGAATCCTTCGAAATCAAATGAAGTGAAAATTACAAAAGTTAGTAAACCAGAGGCTGCAGCACCCAAAATGATTAAAAACAAAGCTGTCGTCATAActtcaaatcaaattattgTTCCAAGCAAAATAGATCcagctaataaaaatatctttaaagtCACATCAGGCTCTGCAACAAaacctattaataataatcatgcTGCTGTGCCTTTTGGAAAATGGACAGATGCCAATAGACaggaatttttaaataaattcaaggAGATAAAGGTTCCAACTTCTAGCAcgacaaatcaaataaaaaattcgaACGACCTAAACAGAATAGACgtcttgaaaaaaatagataGTCAACGATCCAATAACAAGGCACAAGATAAATCTAATGTAAAAGACACCGTGTTTACTTCGAATATTACCCAATctcatgaaacaaaaattgcCGGCAAGAATGATGGTATTAAAGTAGTGCCAAAACCagttgaattaattaataccatTCCTGAAAGTCCTTGTGTAGAACCAGTATCATCTACAATGACTAGTTCTGTTGATAACACTTCTCCAGATCATAAGGAAATGCGTGAACTAAATATGACAGACCTAATTGGTAAAGCTATTGTAGATATGCTTAATAGACCTATTGCTCTACCAATGACAAGGAGTCCTCTTGATGAACCGCGCCAAGTCCGTCCCGTCCCAGAGTCAACTCAACCTCAGATCTTAGGCAATGATCACACCAAGGCGAAACCCAAAGTAGAACAACCAAAAATTAAGCCAGATCAACTAAAACCAGTAACAAATGCTATTGAACAAATTGTTAAAGACAAACAAAACCATGATAAAGACAGTAATGTTTCTCTAGATTatattgaaatgaaaatgaatgaattacaTGGCATACCATTTGTTGAAAGACCACCTCACGAACTACCCAAAGTTTACAAAACGTATGGTAAAACTACAAACCAAAGCAAAGGTGCAAAAAAATTGCTTCCTTGTACAAGCAAACAACCTGTTGTTCTAGAGAATGTAATAGATTTAGAATCAGATGACGAAGTGATTGAACATGAACCAGTTACTGGTGACATAGATCAAAGCAAAGAATTAGCATCAGAACCCTCAAAATCTAATGCTTCTGGTAAAATTGTACCTAAAGAGATTTCTAAAGAATCCATTATAACTGAAAATGATTTTGACAAATTTGCTAGAAGAAATTCTAAATCTTTCGAAAATTGTTTATCTGTTAAACTTGACGGCAATGAGCGAACAAACATTGTCCAAACCATAAAAGAAAAAGATATTACTCAGACCCATTCAGTAAAAAAAGTTACTGCTGACGATAAGTCAAAATTTGCTCCTAAACagtttattgataaaacaGCGATCAATAAAGCTCTTCCTAATACCAAATTTGGAACAGTACCTGAAGATCCTAATAGCAAGAACTACCAGTTGAAAATTCATGATGCATACCAATCAGCTTTGACTGCTAAGCGAAAACTAGATCGTCCTTTGATCGAAGATAAACCAGTTAAAGTTGTATTCATGGATGCCAACCCTGAGTTCGTTCCAAATCAATTAAATGTGCAAGGAAAAGATTTATCTCCTGCTAAGAAATCAACAGTTAATCTAGCAAATAACCCGCAACCACATAGTTCTGAAGATAAAGAAACAACTGAAGTCAAacaagataatttaaaaactaaaacaaaacatcagAGAAAACAAGTTTTAACACCTGTTGAAGCCCCTGAGTTAGAATTAATTCAACCTCCTGATTTCGATACATCACCCaagaagaaaagaaaatttGATGATCATAAAACAGATAAGAGCCCTAAAAGTCTTGTCCCCAAAAAGTCATATTTATTGGGTCGAACGGGACCTGAAGATCAACATGCTTCTCAAGATGCAAATGTGCCTGTAAAAGATGTTCCAAAAATAGCTGAGGTAGTTGTACCAGATCGCACAGTATCTGCTATTGACAGCTTAGTTAAAGCTGCTGAGTTATTAGATAAACAATCGATTCAAAACTCAATTCCAAACACTGAATCTCCACAAAGTACCCCAGTGAAGAGAGGACGGGGTCGACCTAGGAAGTACCCCTTGCCCGATGGAGCTGCCGACAGTAAAGCTGTTAGTCCTAGTCCTCAGATAAAACCAAGACTAATAGATGCCAAACCTgccaaaaaatatgttatttcgGATGAAGACAGTTCAGACGATGAACCAATCATAAGAGAAAACTGGACCATGGGTAAAATTAATGAGAATATTGTTTGCCCAATttgtaacaaattattcagatCAGAAAATGTTGTTTTCAAACATGTCAAACATTGCTCAGGAGTATCACCTACAAGATCTGATTTAGAAAAACGAAGAAGGCGATATTCTAAAGATTCTGACATAAGATCTGATAGTCTGTCCGACGACTTGGATTTCGAGGAAAAACAAAAAGACGATAAGAAATCACCTAAAGACAATATAAAAGTAACGCCTCGAAAAGAAAGCACTGCTAAAGAAATAGAAGAAATTGTCATCGAAGATACTCCtcttaaaaagttaaaaagctCACCTGATCCGAAGAAGGATGATAACGATGAAAACACGAAATTGAAATTCAAAAGAGATGATGCTAAGAATAAAGTAGAATTATCcgatgaaaaacaaaaaagagaGCCAACGCTCAAGGAAATTGCGGACGAAAAGCTGAAATTTAAACAAGCTGAAATTAAAGTGAATAATGAAAAAACCGTTGAAACGAAGAACCAACCAAAATCCACTGAAGAAGGGAATACAGAAAAAACTAAGAAGAAAACCATAGTGCAACAGTCCAATAATCTTACCTGCGAGTTTTGTGGTAAAACTTTTAGACAACTTTCGTATCTGGTTAATCATAAACTACAACATCAGAAAGAACAGACGAAGAAACCGGATGTGAAGGTCAGTGCTAATCCGCAAGTGTTTAGCTGCGAAGTTTGTAAGAAAGAATTTAGGAAACAGTATCATTTAGTACAACATAGAATAATACATAACCCTGAAGTGCCTACGCGAATCTCGCAAAAGAGTTCTCCAGAGCAGGCTGAGACTAAAATGAAAGAAGCGCcgcgaatatctcaaaagaGTTCTTCAGAGCAGACTGAGACTAAAATGAAAGAAACGCCTGCTGTGCCTAAACCGAGTGATGATACAAGTGCCGGCTTCCGATGCGAGCCTTGTGATAAGTCGTTCAGAAAACTACATCATTTAGTTGAACACAGAGAGACCCATGATGGAATCAATAGACAAAAAACGAATACGCAACCTGTGGCTTTGCCGATTGAAAAACCGCCACCGCCACCACAGTGCGATGtgtgcaaaaaatattttagaaaactaCACCATTTAATAGAACATAAGGAACTGCATCACAGTAATGTAGAACAAATGGAAACAAGTTCTGAAAAATCTGATGATAAGAGCGTGCAAAGTTCTCTGTCAACTAGAGATATTATTCATGAATGCTCTCTCTGCTACATGGTATTTCCCAATGAGCATTCTCTCAAAAAACATTTCGTTTTCTGCCAGCAAAAGAAAAAGAGGCAGTTAAAGGTTAAAGAAAATCCTGAAAACTGTGACATAGCTGACATCGTTGATGACAACACCATCACAGAAGACATTACTGATGCGGAAGATGAACCAGAAATCGTCGCAAATATTGCAACAGAAACAGTTGCAGAAGTCGCTATTGTTGATgagaaaacaaacaaagaacAAGTAAACGATGAAAAGTCACCTCCACCGCCAAAGATTCCTGaaattaaaactgaaaatcCTAAGATAGAAAAGCCAAAAGTAGAAAAACCTTTAGAAGTTCCAGAAATTTCTAATAAAGAAAAGGAATTGATAGAAGTGAATAACCCGATCGCGAAACcaacaacaaacaaacgaGCACTTCCAAAAGATATTAAAGATGGCAAGAAAACAATTCCTGAGAAAATTAAGAAGAAAAGTGATAAAATCGAGTTGCCTAAGAAAATTGTGCCTAAGGATAAAATTAGTACGGCAAAAAAACAGAAGACTGTGTTACCTGTTCCATTACCTGTACTTCCAGAAGATGCACCCGCCAAGTCTAGCGACGAGGACGAAGTGCGATACATGCTCAACCCTAACTTCAAAGAAGAAGACACCAATGAAGGGAAAGTGTTCATGAAAGTCAGATCAAACAAAAGAAATTCCTTGCAAATTGAACGACCGAATTCTAGAGAGCTTGTAAACAGGAGAACATCTTTGCAACACCCTCCTAAAATCCCTCGTCTCAAAGCAAAACCAATCGAGCCAAAAGTCGTGCCAACCATAACAAAACCCATTCCTAAACCAAAGCCAGCGGCAACTGAGCAAGCGGCGTCAACTGATTCCGACGACAGTGATGTCAGGTACTCCTTCCCCGAGAACATAACAAAAGTGAATGAGACACAAACGGAAAAGAAAGCTCCCCGGAAATCTATTGCCGATAAAAGAAAGTCACTCAGCGGGATCGCGAAGCGCAAGTCGCTGGGACAACCGAACGCCAAGCTCAAGTTCACTTCACCAATCAGAGTCATCAAACGAAGAACGTTGAACGTGGAGCACCGCTGCGATTGCGGGCAGCTGTTCGGCAGCGCGGCGCTGCTGGCGCGGCACACGAGCCTGGCGCACACGCCGCCGCGCATCCGGCGCCGCCGCTcgccgccccccgcccccgcgccggcccccgcccgcgcccccGCGCACCGCGGCGTGCCCGTCCCAGACAAGATGCGCAAGCTCATGATGCGCTCCGCCAAGAAGGACTAG
Protein Sequence
MDRVNQLRGGAGGGASDGGDATHDESAAPSEAFMSADESSSKYFSLSDSTFDITPIKDVSLASAASNEADHTMTDDLISNLSPITKKDSMLDSFKIGKQIEAANILSGGVNIFDDNDNSFDGDELVIDDNVDMEEKMSLEKEAHLDEEPEAGLVESAVDVASKDTEVVLQIDGKNVDAIDIGNGLYLYRKVGQEELAAVQIITEENQAPTFKFLKVRENAEGNLEVYEEFEVEVSKDVPSKETMSTKNTPHVPNKDVNKGAIKPTTNQNVEKIVKPTTQEISSTSKVETQSEVNEAESKTEVNFNGKMMKINESRKSPVVGSYTPMTYHSTPNKEGKPLTKTMVDQQLHPSRHSDNVKKTIEVHTDQKKQANEDTKLKLESAADKDGITQTIDKHVDKLVEVSQNSQHIKDSNIEEKILLDSVPEATVDIVVSSSVDKIDPVVEVTSETPVPALEVVSNDMLIPPEEVISPILQGVKSPEKSFPDLHKICSIPKVSNISEKSEAASSGIISEKLSSAVEVSDNSLSNDDHVEPITKQSIATEDVRKEIKQESISSTSSVDLKSKDKKEDVKRISSVTDFNDAVSSTSSDQSKNVIPVILLNECKTNNDNIVEENTATISNTELPESAKQETVDDNKTSSNVNVTLPKQIKSQVTENKATIIESEPSELTKHEKVEDIKTTSLPHGSQIQLLENKTSLLINIETDKTEDLKTICSTSELYTDSEDKNLFEEDTKQNVKINLSDSKKEPGKMVEKIESLTITSPKIESKIILPTKECIEISNTNQPKVSSNIEDDTDSKKDVNPKSIDSDVPVTPDSKQNVCQTYSVDQISKDSKPGETVNSEKEASKPMPIEKVIENKMNPTIISPINKLIQVPQGMKLKIVPKAESLNTVLKKIEPTPLMHTGVALAAKLNEPKIYSKTDKLIPVSAGIEPKIISKVEQPITKGFELKTISKTVPLNPSKSNEVKITKVSKPEAAAPKMIKNKAVVITSNQIIVPSKIDPANKNIFKVTSGSATKPINNNHAAVPFGKWTDANRQEFLNKFKEIKVPTSSTTNQIKNSNDLNRIDVLKKIDSQRSNNKAQDKSNVKDTVFTSNITQSHETKIAGKNDGIKVVPKPVELINTIPESPCVEPVSSTMTSSVDNTSPDHKEMRELNMTDLIGKAIVDMLNRPIALPMTRSPLDEPRQVRPVPESTQPQILGNDHTKAKPKVEQPKIKPDQLKPVTNAIEQIVKDKQNHDKDSNVSLDYIEMKMNELHGIPFVERPPHELPKVYKTYGKTTNQSKGAKKLLPCTSKQPVVLENVIDLESDDEVIEHEPVTGDIDQSKELASEPSKSNASGKIVPKEISKESIITENDFDKFARRNSKSFENCLSVKLDGNERTNIVQTIKEKDITQTHSVKKVTADDKSKFAPKQFIDKTAINKALPNTKFGTVPEDPNSKNYQLKIHDAYQSALTAKRKLDRPLIEDKPVKVVFMDANPEFVPNQLNVQGKDLSPAKKSTVNLANNPQPHSSEDKETTEVKQDNLKTKTKHQRKQVLTPVEAPELELIQPPDFDTSPKKKRKFDDHKTDKSPKSLVPKKSYLLGRTGPEDQHASQDANVPVKDVPKIAEVVVPDRTVSAIDSLVKAAELLDKQSIQNSIPNTESPQSTPVKRGRGRPRKYPLPDGAADSKAVSPSPQIKPRLIDAKPAKKYVISDEDSSDDEPIIRENWTMGKINENIVCPICNKLFRSENVVFKHVKHCSGVSPTRSDLEKRRRRYSKDSDIRSDSLSDDLDFEEKQKDDKKSPKDNIKVTPRKESTAKEIEEIVIEDTPLKKLKSSPDPKKDDNDENTKLKFKRDDAKNKVELSDEKQKREPTLKEIADEKLKFKQAEIKVNNEKTVETKNQPKSTEEGNTEKTKKKTIVQQSNNLTCEFCGKTFRQLSYLVNHKLQHQKEQTKKPDVKVSANPQVFSCEVCKKEFRKQYHLVQHRIIHNPEVPTRISQKSSPEQAETKMKEAPRISQKSSSEQTETKMKETPAVPKPSDDTSAGFRCEPCDKSFRKLHHLVEHRETHDGINRQKTNTQPVALPIEKPPPPPQCDVCKKYFRKLHHLIEHKELHHSNVEQMETSSEKSDDKSVQSSLSTRDIIHECSLCYMVFPNEHSLKKHFVFCQQKKKRQLKVKENPENCDIADIVDDNTITEDITDAEDEPEIVANIATETVAEVAIVDEKTNKEQVNDEKSPPPPKIPEIKTENPKIEKPKVEKPLEVPEISNKEKELIEVNNPIAKPTTNKRALPKDIKDGKKTIPEKIKKKSDKIELPKKIVPKDKISTAKKQKTVLPVPLPVLPEDAPAKSSDEDEVRYMLNPNFKEEDTNEGKVFMKVRSNKRNSLQIERPNSRELVNRRTSLQHPPKIPRLKAKPIEPKVVPTITKPIPKPKPAATEQAASTDSDDSDVRYSFPENITKVNETQTEKKAPRKSIADKRKSLSGIAKRKSLGQPNAKLKFTSPIRVIKRRTLNVEHRCDCGQLFGSAALLARHTSLAHTPPRIRRRRSPPPAPAPAPARAPAHRGVPVPDKMRKLMMRSAKKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-