Basic Information

Insect: Chloroclystis v-ata
Gene Symbol: ECU03_0790
Assembly: GCA_963691955.1
Location: OY829910.1:5490743-5493616[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00046 0.032 15.1 0.6 1 23 62 85 62 85 0.96

2 15 1.4 96 4.2 0.2 2 23 113 135 112 135 0.91

3 15 0.029 2 9.4 0.2 3 23 159 181 157 181 0.96

4 15 0.00036 0.025 15.4 0.4 3 20 188 205 186 209 0.90

5 15 0.29 20 6.3 0.5 1 23 214 237 214 237 0.94

6 15 0.00068 0.047 14.6 0.4 2 23 243 265 243 265 0.94

7 15 3.1 2.2e+02 3.1 6.0 1 23 317 340 317 340 0.94

8 15 0.014 0.94 10.5 0.9 2 23 370 392 369 392 0.96

9 15 0.0012 0.085 13.8 2.9 2 23 416 438 415 438 0.96

10 15 0.063 4.3 8.4 0.2 2 23 444 466 443 466 0.94

11 15 1e-06 7e-05 23.5 1.8 1 23 470 493 470 493 0.98

12 15 0.0033 0.23 12.4 1.3 1 23 498 520 498 520 0.97

13 15 0.0073 0.5 11.3 8.0 1 23 525 548 525 548 0.97

14 15 0.08 5.5 8.1 0.9 2 23 555 576 555 576 0.96

15 15 0.61 42 5.3 3.0 1 23 582 605 582 605 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00046	0.032	15.1	0.6	1	23	62	85	62	85	0.96
2	15	1.4	96	4.2	0.2	2	23	113	135	112	135	0.91
3	15	0.029	2	9.4	0.2	3	23	159	181	157	181	0.96
4	15	0.00036	0.025	15.4	0.4	3	20	188	205	186	209	0.90
5	15	0.29	20	6.3	0.5	1	23	214	237	214	237	0.94
6	15	0.00068	0.047	14.6	0.4	2	23	243	265	243	265	0.94
7	15	3.1	2.2e+02	3.1	6.0	1	23	317	340	317	340	0.94
8	15	0.014	0.94	10.5	0.9	2	23	370	392	369	392	0.96
9	15	0.0012	0.085	13.8	2.9	2	23	416	438	415	438	0.96
10	15	0.063	4.3	8.4	0.2	2	23	444	466	443	466	0.94
11	15	1e-06	7e-05	23.5	1.8	1	23	470	493	470	493	0.98
12	15	0.0033	0.23	12.4	1.3	1	23	498	520	498	520	0.97
13	15	0.0073	0.5	11.3	8.0	1	23	525	548	525	548	0.97
14	15	0.08	5.5	8.1	0.9	2	23	555	576	555	576	0.96
15	15	0.61	42	5.3	3.0	1	23	582	605	582	605	0.94

Sequence Information

Coding Sequence: ATGCATATAAGAAAATGCAAAATCGACTTTGATTTCGCTATAAAAAAGGAAGATTACACCATGGATCTCGATCAAAACTACCAAAACCGACCCACGAAGCCTAGCGTTAAACAAATACGCGAGAATATACTAATAGTCATCAACATGTCCACGGCTGTACCTTTCaacttttacaaaaacaaatttaactgTTTTTACTGCTCCAAAGACTTCCCCGACGCAGATTCGATGAAACAGCACACGATTACTGAACACCCCGTTTGCAATATCAAAGAAAAGTGCATCAGAAAGTGTCGAGAGACTGTCACATGCGTTAAAATCGACATATCAACCCTCTCTTGCAAGCTCTGCTTTGAAACCATACCAGATTTCGACAAACTCATCGACCATTTAACCCTCAAACACAACGCTAACTACGACAGAACTATCACAACCTGCTTGCAACCATACAGATTAATTAAAGATCACATGGCCTGCCCTAACTGTCCAGCTCAAGTATTCCGATTCTTCGGAACACTCCTCAAGCACATGAATAAAGAGCACAcgaataataacattatatgcGTGTATTGCGGCGAAACATTCCGTCGCGATCAGAATCTCCGCGTACATATATGGCGACATCACCGCGATGGCCGTTTTAAGTGCACCATATGCGATTCCGACTGCGGAATCCCTTCACGTCTGTACATGCACATGGCGAAGGCTCACGGTGTTAGAGCAGCGAAATGCCCCAAGTGCTCTGAAACATTCGCAACACAATACCTCCGCCAGAAACATTTGATTGAGGCACACGATTCTGGGCATAAATGCTCGTTCTGCGATCAGAGAACGCTTACGAAGTATCACGTTAGAGCTGAAAAGCTATCGGGCGACAAAATCAGACAAAACATTGCATGCATTATCAACAATACCACAGCAGTTCCATTCTGGTTCATAAATAACTCCTTCAAATGTCTCTTTTGCGATGAAACCTACCCGCAGTGTTACCTTCTCCACTTCCATTACCAAAAGGACCACTACGAAATCAACCTAGACGAATCCCACCCCATCCTAAAGAGATACAGGCAAAACAACTCCTTCCTACGGCTAAACATCGTCGATTTAACCTGTAAACTATGCTACCAAACCACCGTAACACTAGACACTATGACCACCCATCTTAAGACAATTCACGAGTTAGAATTCGACGCGAAAATCACCAATAACTTGATAGAAACCTTTAAACTCTCCGCTGATTCAAATAAATGCCATATTTGCCGACGCAAATTCGAATACTTCAAAATGCTAATCATACATATGAGAGAAAATCACGCTAGAGGCGATATTAAATGTGATTTGTGTGAGAAAACGTTTCTCAGAAATCCGGCATATGTCACCCATAAGATAACCGTGCATGGTCCAGGCTTTCAATGCGAGGAGTGTGGCAAAGATTTCAGAAGCAAATTCAAACTGAAATCACACATAAATAAGGACCATAacgattataaatataaatgcttTAGATGCGATAGTGAATTCCCCACTCCGTATCAGAGAAGAAAGCATATGATTGATCATACTGGATCTGTGCATCGATGCGATTATTGCGAGAAGTTTTTTACATGTTCATCGCATTTGAACATGCATGTTAGAAGAGTGCATTTGAACGAGAAGAATGCGAAGTGCCCTATATGCGCGATGGAGTGGTTTGACCGACACACACTCAAAGCGCATATGCAAAAGCATGTTGTGGGGAGGAATCATGTATGTTATATATGCGGGGCGCGGTATCGCATGAAGCGGAATTGTGAGGTGCATTTGGCGAAGAAGCATAATGTTAGTCGGAAGAGGATTTTGTCTTCTGGGTAA
Protein Sequence: MHIRKCKIDFDFAIKKEDYTMDLDQNYQNRPTKPSVKQIRENILIVINMSTAVPFNFYKNKFNCFYCSKDFPDADSMKQHTITEHPVCNIKEKCIRKCRETVTCVKIDISTLSCKLCFETIPDFDKLIDHLTLKHNANYDRTITTCLQPYRLIKDHMACPNCPAQVFRFFGTLLKHMNKEHTNNNIICVYCGETFRRDQNLRVHIWRHHRDGRFKCTICDSDCGIPSRLYMHMAKAHGVRAAKCPKCSETFATQYLRQKHLIEAHDSGHKCSFCDQRTLTKYHVRAEKLSGDKIRQNIACIINNTTAVPFWFINNSFKCLFCDETYPQCYLLHFHYQKDHYEINLDESHPILKRYRQNNSFLRLNIVDLTCKLCYQTTVTLDTMTTHLKTIHELEFDAKITNNLIETFKLSADSNKCHICRRKFEYFKMLIIHMRENHARGDIKCDLCEKTFLRNPAYVTHKITVHGPGFQCEECGKDFRSKFKLKSHINKDHNDYKYKCFRCDSEFPTPYQRRKHMIDHTGSVHRCDYCEKFFTCSSHLNMHVRRVHLNEKNAKCPICAMEWFDRHTLKAHMQKHVVGRNHVCYICGARYRMKRNCEVHLAKKHNVSRKRILSSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -