Basic Information

Insect: Chloroclystis v-ata
Gene Symbol: ZEB2
Assembly: GCA_963691955.1
Location: OY829896.1:3368039-3371643[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.33 22 6.1 2.0 1 23 192 214 192 215 0.93

2 11 0.0015 0.1 13.5 9.4 1 23 237 259 237 259 0.98

3 11 0.00062 0.043 14.7 4.2 1 23 267 290 267 290 0.97

4 11 0.00069 0.048 14.6 2.0 1 23 295 317 295 317 0.96

5 11 0.0025 0.17 12.8 1.7 2 23 323 344 323 344 0.97

6 11 1.2e-05 0.0008 20.1 3.6 1 23 350 372 350 372 0.96

7 11 4.7e-05 0.0033 18.2 0.7 1 23 378 400 378 400 0.98

8 11 3.9e-07 2.7e-05 24.8 1.3 1 23 406 428 406 428 0.98

9 11 8.1e-05 0.0056 17.5 0.2 1 23 434 456 434 456 0.98

10 11 8e-05 0.0055 17.5 1.0 1 21 462 482 462 484 0.96

11 11 3.6e-05 0.0025 18.6 0.0 1 23 490 512 490 512 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.33	22	6.1	2.0	1	23	192	214	192	215	0.93
2	11	0.0015	0.1	13.5	9.4	1	23	237	259	237	259	0.98
3	11	0.00062	0.043	14.7	4.2	1	23	267	290	267	290	0.97
4	11	0.00069	0.048	14.6	2.0	1	23	295	317	295	317	0.96
5	11	0.0025	0.17	12.8	1.7	2	23	323	344	323	344	0.97
6	11	1.2e-05	0.0008	20.1	3.6	1	23	350	372	350	372	0.96
7	11	4.7e-05	0.0033	18.2	0.7	1	23	378	400	378	400	0.98
8	11	3.9e-07	2.7e-05	24.8	1.3	1	23	406	428	406	428	0.98
9	11	8.1e-05	0.0056	17.5	0.2	1	23	434	456	434	456	0.98
10	11	8e-05	0.0055	17.5	1.0	1	21	462	482	462	484	0.96
11	11	3.6e-05	0.0025	18.6	0.0	1	23	490	512	490	512	0.98

Sequence Information

Coding Sequence: atGGAGATTAGTATAAAATCTTTTGACGAAATATGTAGGGCATGCCTCTCTGTATCACACAACATGAAATCACTCTTTACTAAGATCGACGGCGAAAATCAGTGTTTGCtggatttatttgtttctgtTACAATTTTAGACGCCAAAACTGAAGATGAGCTTCCAAAACAGGTTTGCAGTGAATGTGAGCTCGTTTTACACAAAACAGAAGAATTCAGGAAACGTTGTTTGGAATCTGATAACATTCTAAAAAAAGTGTATAATAATTTGAGTCAATTAGATACAATCGGTACTAATGACGTAGATGTGAAGACCAAGCTAACATTCGAAAATAATGATTACGAGAACACGGAAAAGAAAGATTTTGGTGAAGATGAGCCCTACTCCGATAATCATGAGCAAAATTCTATAAAGaaagaatattttgaaatcGGTGAACATGATGACTTTGATTCGGAACCAGCCGACATGCTGCCCATAGAGTACGATATAAAATCTAAACCAATGAAATCTACCAAtgcaaaaaaatcaaaagttcAAAAGAAAACTAACAATGATtcatttcattataaatatttatgtgaaagCTGCAATACTACCTTTTTAGATAGTAAATCTTTTGATAGTCATATAGAAAGCCATCATGGAAATGAGGAAACCAAAAAAGCATATGATTGTACCGAGAAAATAGAAAAGGAGGAACCAAAGTACCAATGCTCTCTCTGTTTTCGGTGCTGTAAAACAAGAAAGACACTTAATAAACATATGAAACTGCATGAACAGACAGATAACATCAGATACCATTGCGATAAATGTAAAAGACAGTTCAAATACAAGTCGTTTCTCGAAAGCCATGTTATGTCAGTACATATGCATAATAGTTTCGACTGCCATCTATGTAAAGAGTCatttaaaagtaaagaaaGATTGGAATTACATGTAGATAGTCATACAGAGAAAAAGAATGTTTGTTCTGTTTGTGGAAAGGCATTTTTAATGCTGTGTACATTAaagGACCACATGCGGAAGCACACTGGGGAGAAGCCCTATCTCTGCTGCACCTGCGGTAAAGGATTCAGTCAGAAGACCAACCTTGCACAGCACACTCGGAGACATCTCGGAGTTAAGCCTTTTAAATGCAGCACTTGCGCTAAAAGTTTCGTGTCGAAAGGTGAGCTGGACGCGCACAGTCGTAAGCATAGCGGTGCACATCCGTTCGTCTGCGACGAGTGCGGGTGCGGGTTCACAACCTCCAGCGCACTCGTCAAGCACCGCAGGACACATACAGgtgaACGTCCATACGCCTGCGACCTTTGCCCCATGCGCTTCGCAGCCTCCGGGACCCTCAAGAACCATCGCCGAACGCACACCGGAGAGAGACCCTTCCAGTGCTCCCTCTGTGAGAGAGCCTTCGTGCAGCGAACAGACCTCATCGCTCACATCCGCTGTCACACGGGCGAGCGGCCCTACGTGTGCGCGGACTGCGGACAGGGCTTCAGGAAGGCGGCCGGACTCAAGCAGCATGCGAAAGTGCACGGGAAGGAATTGAATAGTTCCTTGTGA
Protein Sequence: MEISIKSFDEICRACLSVSHNMKSLFTKIDGENQCLLDLFVSVTILDAKTEDELPKQVCSECELVLHKTEEFRKRCLESDNILKKVYNNLSQLDTIGTNDVDVKTKLTFENNDYENTEKKDFGEDEPYSDNHEQNSIKKEYFEIGEHDDFDSEPADMLPIEYDIKSKPMKSTNAKKSKVQKKTNNDSFHYKYLCESCNTTFLDSKSFDSHIESHHGNEETKKAYDCTEKIEKEEPKYQCSLCFRCCKTRKTLNKHMKLHEQTDNIRYHCDKCKRQFKYKSFLESHVMSVHMHNSFDCHLCKESFKSKERLELHVDSHTEKKNVCSVCGKAFLMLCTLKDHMRKHTGEKPYLCCTCGKGFSQKTNLAQHTRRHLGVKPFKCSTCAKSFVSKGELDAHSRKHSGAHPFVCDECGCGFTTSSALVKHRRTHTGERPYACDLCPMRFAASGTLKNHRRTHTGERPFQCSLCERAFVQRTDLIAHIRCHTGERPYVCADCGQGFRKAAGLKQHAKVHGKELNSSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -