Basic Information

Insect: Chloroclystis v-ata
Gene Symbol: -
Assembly: GCA_963691955.1
Location: OY829905.1:15629073-15637456[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.018 1.2 10.1 4.1 1 23 193 216 193 216 0.93

2 29 0.00012 0.0082 17.0 0.6 2 20 250 268 249 270 0.94

3 29 0.0013 0.088 13.7 0.6 2 23 308 330 308 330 0.97

4 29 1.6e-05 0.0011 19.7 1.1 1 23 377 400 377 400 0.98

5 29 0.004 0.28 12.1 0.2 1 23 438 460 438 460 0.96

6 29 0.00015 0.01 16.7 2.2 2 23 507 528 506 528 0.97

7 29 0.00021 0.015 16.2 2.0 2 23 576 598 576 598 0.97

8 29 0.00049 0.034 15.0 1.7 1 23 648 671 648 671 0.97

9 29 0.00029 0.02 15.7 0.1 1 23 726 748 726 748 0.97

10 29 0.0018 0.12 13.3 7.7 1 23 759 781 759 781 0.98

11 29 2.9 2e+02 3.2 0.4 2 23 793 814 792 814 0.94

12 29 0.0034 0.23 12.4 1.0 1 23 824 846 824 846 0.98

13 29 1.6 1.1e+02 4.0 4.2 1 19 875 893 875 897 0.85

14 29 0.0012 0.084 13.8 5.6 1 23 908 930 908 930 0.98

15 29 0.0018 0.12 13.3 1.3 1 23 938 960 938 960 0.96

16 29 0.0011 0.076 13.9 0.2 2 23 980 1002 979 1002 0.97

17 29 0.00079 0.055 14.4 1.5 1 23 1020 1042 1020 1042 0.98

18 29 0.18 12 6.9 2.1 2 23 1083 1105 1082 1105 0.90

19 29 0.0061 0.42 11.6 0.2 2 23 1128 1149 1127 1149 0.95

20 29 0.37 25 6.0 0.3 2 20 1153 1171 1152 1172 0.92

21 29 0.24 16 6.6 1.6 2 23 1192 1214 1191 1214 0.96

22 29 0.048 3.3 8.8 0.3 2 23 1230 1251 1229 1251 0.94

23 29 0.5 35 5.5 4.2 5 23 1261 1279 1259 1279 0.94

24 29 0.0011 0.078 13.9 1.7 1 23 1289 1312 1289 1312 0.96

25 29 1.8 1.2e+02 3.8 6.5 2 23 1329 1347 1329 1347 0.94

26 29 7.7 5.3e+02 1.8 3.7 2 20 1351 1369 1350 1370 0.92

27 29 0.18 13 6.9 2.2 2 23 1418 1439 1417 1439 0.94

28 29 0.0084 0.58 11.1 0.5 2 23 1450 1472 1449 1472 0.96

29 29 0.24 17 6.6 2.5 2 21 1510 1529 1509 1530 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.018	1.2	10.1	4.1	1	23	193	216	193	216	0.93
2	29	0.00012	0.0082	17.0	0.6	2	20	250	268	249	270	0.94
3	29	0.0013	0.088	13.7	0.6	2	23	308	330	308	330	0.97
4	29	1.6e-05	0.0011	19.7	1.1	1	23	377	400	377	400	0.98
5	29	0.004	0.28	12.1	0.2	1	23	438	460	438	460	0.96
6	29	0.00015	0.01	16.7	2.2	2	23	507	528	506	528	0.97
7	29	0.00021	0.015	16.2	2.0	2	23	576	598	576	598	0.97
8	29	0.00049	0.034	15.0	1.7	1	23	648	671	648	671	0.97
9	29	0.00029	0.02	15.7	0.1	1	23	726	748	726	748	0.97
10	29	0.0018	0.12	13.3	7.7	1	23	759	781	759	781	0.98
11	29	2.9	2e+02	3.2	0.4	2	23	793	814	792	814	0.94
12	29	0.0034	0.23	12.4	1.0	1	23	824	846	824	846	0.98
13	29	1.6	1.1e+02	4.0	4.2	1	19	875	893	875	897	0.85
14	29	0.0012	0.084	13.8	5.6	1	23	908	930	908	930	0.98
15	29	0.0018	0.12	13.3	1.3	1	23	938	960	938	960	0.96
16	29	0.0011	0.076	13.9	0.2	2	23	980	1002	979	1002	0.97
17	29	0.00079	0.055	14.4	1.5	1	23	1020	1042	1020	1042	0.98
18	29	0.18	12	6.9	2.1	2	23	1083	1105	1082	1105	0.90
19	29	0.0061	0.42	11.6	0.2	2	23	1128	1149	1127	1149	0.95
20	29	0.37	25	6.0	0.3	2	20	1153	1171	1152	1172	0.92
21	29	0.24	16	6.6	1.6	2	23	1192	1214	1191	1214	0.96
22	29	0.048	3.3	8.8	0.3	2	23	1230	1251	1229	1251	0.94
23	29	0.5	35	5.5	4.2	5	23	1261	1279	1259	1279	0.94
24	29	0.0011	0.078	13.9	1.7	1	23	1289	1312	1289	1312	0.96
25	29	1.8	1.2e+02	3.8	6.5	2	23	1329	1347	1329	1347	0.94
26	29	7.7	5.3e+02	1.8	3.7	2	20	1351	1369	1350	1370	0.92
27	29	0.18	13	6.9	2.2	2	23	1418	1439	1417	1439	0.94
28	29	0.0084	0.58	11.1	0.5	2	23	1450	1472	1449	1472	0.96
29	29	0.24	17	6.6	2.5	2	21	1510	1529	1509	1530	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGTAGGCTTTGCCTCAAACTCGGTGACTTTTTCTCCATTTTTGCATCGGATAACGATATCCAGCTCTCAGAAATGGTTATGGCATGTTCCACTATAAAGGTATATGATGGAGATGGGCTACCAGACAAGATTTGCTCAGACTGTGTACAAAAACTCAGTTGTGCCTACATATTCAAACAACAATGTGAAAGATCTGATCAGGAGTTACGGCGGAACTATGTCCCACCACCGGggTTTAGCAGCACTCCCACTCTCCCACCAAACCGACAAAGTAGCGATTCTGCCTTCTCAACACACACAGATAGTCTTAAGTCATTATATTCCGAGATCAAAGTCACCCCAGTCAGCAGAGGCCGAAAGCGGAGTGTGGAGAGTGACGCCTCGCTCAGTAGTCGGTCCCAGGAGAGGCCCGGCAGCTCTAAGCGGGTGGATGAGCTAAAGAAATTACAAAAACCTAAGAAACCGCGGTATTCCGCTGACTCGGATTACGATGAAACTGCAGCCTCTAGTCTTGTAAACGAAACTGACTCAGATGAACCACTCTTCAAAAATGATCATACTTGTCCTCATTGCCCGAAAACCTTCAAATGgatgaagagtttgaagaTACACATCGCTCATATGCACACAGGCAAGAAAGCCACCACACGAGCTCCACAAGTTAATGTCCATATTCCTATAACAGCTGCAAAGCAAAGTCAACCAGAAGATGAAGATGAGAAGATAACCTGCAACAAATGTGGTAAGACCTTTAAACTGAAGATAATGCTGAAGCGACATCAAGAAAATTGTCAGAAAACTCCCGTTAAACCGGCAGCTAATCCTATATCTCCTATGAAAGAGCTGGTAATAACGTTACAGCCGATAGACGCCGTGCAACGCCTCGACCCCAATAAACCCACCTGCGAATATTGCTCGGCACAGTTCAAAACTATGGACAATTTGGATAAACATCTTAAAATGGCTCATGCAGCAATACGAAAGAAAGCAATAATCGATAAGAAGCCTAATATATTGATATGCATATTTTGTAGTAAAAGTTTCGAACATTACTATATCTATACTTCGCATTTCAATAGTTGTCCTATGAAGGAGACGTTACCGTCGTATAAATGTCCCATGTGTCCGAAGACGTGCACTCGGCCCTCGGGCTACGTCAGCCACGTGAGGAAGGTTCACTGGCAGTACGTGGGCGCCGCGAGCCCGAAGGCGGAGCCCGCGCCCCCCGGCCCCGCCCCCACCGGCCCCTCGCCCCCCACCCCCGCGCCCGCCggccccgcgccgccgcccttCGAGTGCCGCAAGTGCAGCAAGAAGCTCGCCACGCAGGCGCAGCTCATATCGCATTTAGCCGCTCACATGTGCAATGCCGAAGACGATAACGCGACAGCCGATGCTGACGATTTCGATTCAAGggATGACACGGGGCCCGATGATTCGATGTCTATGCAATCGGCGCACAGTTCGCAAGACTCTCAGACTCCCTCAGGCCCTTCGAAATGCCGCTACTGCGGTAAGGAGTTTACCTACAAGAAGTCACTTATGTCACATGAGCTGAAGCATGAAGAGGAAAGAGTTGCAGTGAAGCATGAGCCCGCCGAAAAGCCATCGAATACTGATCTACTGACCGAGGCCCAGGATGTCGCTGCCGATGATCAGGAATTCGATTCAGAATCTAGTCATGACGAGGGAGACGAAGACAATACCTGTGATATCTGCGAAAAGCAGTTCTCGTACAAAAGGTTGCTCATACAACACAAACGGACGAAACATACAATGGTGGCGGGTATGAAGCGAGCTAAAATAAGCCTTAAAGATTGCACAGTAAGGTGCCTCATCTGTGAAGAAGAGATGAAAGTGAGCGCCATCAATGAGCATAACCAAAAACATACTTCTGTTAACATAAAGCCGAGAAACATCTACACTTGTGCTCAGTGTGCGCAAAAGTTCAAGAGTTGCAGCAATCTGGCTAATCACATCAAATTGGTGCAcagGCTAAAGCAATCTGATGTGCCGAAGCAATTTGCGGGTGTGGACATGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGAGTCCCAGAGTCACAACGGCTTTGGAGAGGTTCCGCAGAAGGCAGCTCCTACAGTAAACTTGACCGGGTTCACGTGTCCCATCTGCGGCAAGAAGATGCCGACGCTGGTGTCTCTGAAGCGGCACGTCAACTGGCACTCCTTCGTCGGAAACAGCTTGGAGGCCAAGCACGAGTGCTTTGTTTGTAAAGAGACGTTCAAGTTCAAGGGGCACTTCAAGATGCACATGCGCAAGCACTACCACGACACGTCGCTGGACCCCGCGCTGCTCACCTGCGCCGTCTGCCAGCGCCGCAGCAAGCACCTCCGCGCCGCGCAGGCGCACGCCAACTGGCACAAGCAGACGCGCTTCCAGGCCAAGGACTACCAGTGCTCCATCTGCAAGCGCGTCTTCCAGTACAGGAAGGTCTACCTCTCGCACATGGCCGTGCACTACAAGAAGGGCGAGAGCGGACAGAACACCGTCGTCGGCGACATCACGCCCAACAACCTCGACAAGGCCAAGTTCGACGGAACCTTCACCTGCCAGCTCTGCGGCAAGGTCTGCGACTCCGAAAACTCCCTCAAGTGCCATAGCACTTGGCACAGATCCAAGACGCTCCTGTTCGGAGCGCGCCACGAGTGCCAAATGTGCAATCTCCAATTCACCAACAAGAGACATCTGGAGCTCCACACTCGCAGCCATTACGAGGACCCGAATGGAGAGTTCAAATGCAATATTTGCGGGAAAGGTTTCATAGACGAAGAGTATCACAAGAGACACGTGAAGGGACACAACTTCGATCACCAATCTCACAAGAAAAGAATCGAGAACCTGCGCAAAGGGAAGGTCAAGTGTCCTATCTGCGACCGATACTATCCCGAACTGGTGAAGCTGATCCGGCACCTGCGCCGCACGCACCCCGAGAGCAAGATGATCAAGGAGGACCCcgacgcgccgccgccgcagtaCTACTCGTGCAAGCTCTGCGCCAAGTCCTTCTACGACGAGAACCGCCTCAAGAGGCACCAGGCCTCTCATCTGCGGAAGCCGTGCTTCATCAAATGCAAATTCTGCGGCTTCAAGACCATCTCCATGAAATCTCATCTCTTGCATATCAAGCAGAAGCACATGACGAAGAAGTACGTGGATAATCCTCTGAAATGCACGCATTGCGACGAGGTGTTCGTGTGGGGCTACGCGCTGCATCACCACCTGCGGGACGTCCACGGCGTGCACGAGCAGTGGATCGCCGAGAGCACCGAGGCCACGCTGGAGGGCCCGCTCAAGGACCTGCAGTGCTCGCTCTGCCTCAAGGTGCTCGCCAGCAAGGGCAACTTCGAGCGACACATCGACTACCACAACACGCTGCGCTGCAACTACTGCTTCGAGTACTTCAGCACGCTGCGCTTCCTCGAGGGACATCTCGCCTTCACCTGCGACAAGAAGAACCTCATCGGTGACGTCGATCCCTACCCCAAACGGGTCAAATGCGAGGTTTGCTACAAGGCATTCAGCTTGCAGGTCAAATTGGATTGCCATCTCCGCACGCAACACAACATCAAGGTGAACCGCGACGCCAGCGCCGGGAAACAGGAGCTCGTTTGCGATTTCTGTTTTAAAGTATTCGAGAACGAGTACGCGCTCAGCGGACACAAACTGTACCACCGCACCATCGGCTACTTCGGCTGCATCTACTGTGAGAGGAAATTCAACACGCAGACCGCCTACCGCAAGCACAAGAACCATCACTTCTCCATGCAGAACGTGGACGAGCCCTTCAAGTGCGAGCACTGCGACGAGACGTTTGTGCAGTTCCGCGAGATGATCTACCACTTGCGCGACGACCACGACGACGACAAGGAGTGGATCATCCTGCCCAAGGAGTCCGTGGAGGAGACCTGCTCCATCTGCCACAAGACCTTCTTCAACCTGCACCGTCACATGGACTACCACGAAGAGAACAAATGCAAGAAATGCCACGAGTACTTCTACTCTACCGTGGACTACGACAACCACCTCTGTCCGATCGAGAGCGACGAGGAGGCCCCGGGCGTTCCCAAATCAGACATGCCTTACGAGGAATGCACTTTCTGCTTTAAACCCATCACCAAGAAGGACTCCAAGTTGAAGCACGATAAGCTACATAGCACCTCGGGCGCTATATCCTGTAGATTTTGCCACCTCAAATTTAAGACGCTCGACGCGTTCAATATTCACGCGTTTTCTCATCGCagcagaaaatataataagaaaccGCTCAAATGTCGAGTTTGCAAGGAGCGTTTCGTGAAGTACGGACCTTTCATAAAGCATATGAAGGTTGTGCACAAATGCGTTAAGAAGAGTCACTACCGCGCGCTCGTGCGGCCCGAGCGCTGCGTCATCTGCGGCGAGAGCCTCCCCAACCTCCACAACCACTACCGCGCGCACCTCACCAACCAGTGCCAGCTCTGCCTCAAATACTTCACCTCCTCGCGCCTGTACGCCAGACACCAGTGCAACGTGGAAGACGAGGACACTACCAAAGTGTTCACTTCTGACGAAAACCTTAATGTACTCATCAACTCATACACGCCCAAAGATTTAAAGGACGATGAGAAGTATTACGGATACACTGACGATGATGAAGAAGTAGAGACAGAGCTACCTCCGAGGCTGACGATAGAGCATGACAACAAAGTGAAGACATATGCTACGAAGAAGAAAAAGTCAGGCCCAGGCCGGTTACAACAAGAGGTGGAATATGAGAGGGACTTGCATATGATGGTGCAATCCCCAATTATATCCGATGTTTTATCTCTCTTCCAAAATGAGGAGGAAACTCAAGATGTTAACGGAGATAGCAAAACACGAACATTCTTAGGAGAGGTGGTTTCTTTGACTGATGATGATTCTATGGATGTAAATGATATTGAACCGCCTGTTGTCGttattgatgatgattag
Protein Sequence: MALKLGKCRLCLKLGDFFSIFASDNDIQLSEMVMACSTIKVYDGDGLPDKICSDCVQKLSCAYIFKQQCERSDQELRRNYVPPPGFSSTPTLPPNRQSSDSAFSTHTDSLKSLYSEIKVTPVSRGRKRSVESDASLSSRSQERPGSSKRVDELKKLQKPKKPRYSADSDYDETAASSLVNETDSDEPLFKNDHTCPHCPKTFKWMKSLKIHIAHMHTGKKATTRAPQVNVHIPITAAKQSQPEDEDEKITCNKCGKTFKLKIMLKRHQENCQKTPVKPAANPISPMKELVITLQPIDAVQRLDPNKPTCEYCSAQFKTMDNLDKHLKMAHAAIRKKAIIDKKPNILICIFCSKSFEHYYIYTSHFNSCPMKETLPSYKCPMCPKTCTRPSGYVSHVRKVHWQYVGAASPKAEPAPPGPAPTGPSPPTPAPAGPAPPPFECRKCSKKLATQAQLISHLAAHMCNAEDDNATADADDFDSRDDTGPDDSMSMQSAHSSQDSQTPSGPSKCRYCGKEFTYKKSLMSHELKHEEERVAVKHEPAEKPSNTDLLTEAQDVAADDQEFDSESSHDEGDEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCTVRCLICEEEMKVSAINEHNQKHTSVNIKPRNIYTCAQCAQKFKSCSNLANHIKLVHRLKQSDVPKQFAGVDMADFCEVVVTKAEPLDESQSHNGFGEVPQKAAPTVNLTGFTCPICGKKMPTLVSLKRHVNWHSFVGNSLEAKHECFVCKETFKFKGHFKMHMRKHYHDTSLDPALLTCAVCQRRSKHLRAAQAHANWHKQTRFQAKDYQCSICKRVFQYRKVYLSHMAVHYKKGESGQNTVVGDITPNNLDKAKFDGTFTCQLCGKVCDSENSLKCHSTWHRSKTLLFGARHECQMCNLQFTNKRHLELHTRSHYEDPNGEFKCNICGKGFIDEEYHKRHVKGHNFDHQSHKKRIENLRKGKVKCPICDRYYPELVKLIRHLRRTHPESKMIKEDPDAPPPQYYSCKLCAKSFYDENRLKRHQASHLRKPCFIKCKFCGFKTISMKSHLLHIKQKHMTKKYVDNPLKCTHCDEVFVWGYALHHHLRDVHGVHEQWIAESTEATLEGPLKDLQCSLCLKVLASKGNFERHIDYHNTLRCNYCFEYFSTLRFLEGHLAFTCDKKNLIGDVDPYPKRVKCEVCYKAFSLQVKLDCHLRTQHNIKVNRDASAGKQELVCDFCFKVFENEYALSGHKLYHRTIGYFGCIYCERKFNTQTAYRKHKNHHFSMQNVDEPFKCEHCDETFVQFREMIYHLRDDHDDDKEWIILPKESVEETCSICHKTFFNLHRHMDYHEENKCKKCHEYFYSTVDYDNHLCPIESDEEAPGVPKSDMPYEECTFCFKPITKKDSKLKHDKLHSTSGAISCRFCHLKFKTLDAFNIHAFSHRSRKYNKKPLKCRVCKERFVKYGPFIKHMKVVHKCVKKSHYRALVRPERCVICGESLPNLHNHYRAHLTNQCQLCLKYFTSSRLYARHQCNVEDEDTTKVFTSDENLNVLINSYTPKDLKDDEKYYGYTDDDEEVETELPPRLTIEHDNKVKTYATKKKKSGPGRLQQEVEYERDLHMMVQSPIISDVLSLFQNEEETQDVNGDSKTRTFLGEVVSLTDDDSMDVNDIEPPVVVIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -