Basic Information

Insect: Chloroclystis v-ata
Gene Symbol: -
Assembly: GCA_963691955.1
Location: OY829910.1:4892109-4903056[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.051 3.5 8.7 0.0 1 23 28 51 28 51 0.94

2 22 0.03 2.1 9.4 2.2 3 23 124 144 122 144 0.96

3 22 0.0016 0.11 13.4 0.2 1 23 148 170 148 170 0.97

4 22 2.1 1.4e+02 3.6 0.2 1 10 177 186 177 189 0.92

5 22 0.0014 0.095 13.6 1.8 1 23 733 755 733 755 0.98

6 22 0.00019 0.013 16.4 0.4 1 23 759 781 759 781 0.96

7 22 0.25 17 6.5 8.1 1 23 787 810 787 810 0.85

8 22 0.15 11 7.2 0.8 2 23 818 840 817 840 0.90

9 22 0.0012 0.08 13.9 3.9 2 23 848 870 847 870 0.96

10 22 2.1e-05 0.0015 19.3 2.5 1 23 876 898 876 898 0.99

11 22 1.5e-06 0.00011 22.9 2.6 1 23 904 926 904 926 0.98

12 22 0.0061 0.42 11.6 0.4 1 23 933 956 933 956 0.97

13 22 0.22 15 6.7 6.4 1 23 1072 1095 1072 1095 0.96

14 22 3.4 2.4e+02 2.9 0.4 2 23 1122 1146 1121 1147 0.87

15 22 1.8 1.2e+02 3.8 4.3 1 23 1168 1190 1168 1190 0.98

16 22 1.1 79 4.4 0.3 1 23 1194 1217 1194 1217 0.88

17 22 0.00017 0.012 16.5 1.2 1 23 1223 1245 1223 1245 0.98

18 22 0.00018 0.012 16.4 3.8 1 23 1251 1274 1251 1274 0.97

19 22 0.00017 0.012 16.5 0.2 2 23 1282 1304 1281 1304 0.96

20 22 3.9e-05 0.0027 18.5 3.1 1 23 1310 1332 1310 1332 0.97

21 22 6.2e-07 4.3e-05 24.1 0.5 2 23 1339 1360 1338 1360 0.97

22 22 0.055 3.8 8.6 4.0 1 23 1366 1389 1366 1389 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.051	3.5	8.7	0.0	1	23	28	51	28	51	0.94
2	22	0.03	2.1	9.4	2.2	3	23	124	144	122	144	0.96
3	22	0.0016	0.11	13.4	0.2	1	23	148	170	148	170	0.97
4	22	2.1	1.4e+02	3.6	0.2	1	10	177	186	177	189	0.92
5	22	0.0014	0.095	13.6	1.8	1	23	733	755	733	755	0.98
6	22	0.00019	0.013	16.4	0.4	1	23	759	781	759	781	0.96
7	22	0.25	17	6.5	8.1	1	23	787	810	787	810	0.85
8	22	0.15	11	7.2	0.8	2	23	818	840	817	840	0.90
9	22	0.0012	0.08	13.9	3.9	2	23	848	870	847	870	0.96
10	22	2.1e-05	0.0015	19.3	2.5	1	23	876	898	876	898	0.99
11	22	1.5e-06	0.00011	22.9	2.6	1	23	904	926	904	926	0.98
12	22	0.0061	0.42	11.6	0.4	1	23	933	956	933	956	0.97
13	22	0.22	15	6.7	6.4	1	23	1072	1095	1072	1095	0.96
14	22	3.4	2.4e+02	2.9	0.4	2	23	1122	1146	1121	1147	0.87
15	22	1.8	1.2e+02	3.8	4.3	1	23	1168	1190	1168	1190	0.98
16	22	1.1	79	4.4	0.3	1	23	1194	1217	1194	1217	0.88
17	22	0.00017	0.012	16.5	1.2	1	23	1223	1245	1223	1245	0.98
18	22	0.00018	0.012	16.4	3.8	1	23	1251	1274	1251	1274	0.97
19	22	0.00017	0.012	16.5	0.2	2	23	1282	1304	1281	1304	0.96
20	22	3.9e-05	0.0027	18.5	3.1	1	23	1310	1332	1310	1332	0.97
21	22	6.2e-07	4.3e-05	24.1	0.5	2	23	1339	1360	1338	1360	0.97
22	22	0.055	3.8	8.6	4.0	1	23	1366	1389	1366	1389	0.98

Sequence Information

Coding Sequence: ATGAAAAAGCAATGGCACAATCTCACCACGATCCTCCATTTTTCTAACGCCACACCCTTCAAGGATAGGAATGACGCTGGATATATATGTGCGTATTGCTACGAGTCATATCCCGATCCGGTTGTATTACGTGCTCACACTCAAGCCGATCATCAAGACGAGAAAAGGACTTACAAAGCTGGCTCGGCTGTTAACAATTTCATAGCATATCTCGATATTGTCGACTTAAAATGTACTATATGTGACACCCCGAAGCAAGATTTGAAAACCCTTATTGAACATTTAGTAGCTGCACACCAGAAAGAGTACTATCTAGGCGAGACGGATTACTTTATACCCTTCAAATTGACGGATGAGATACAAATGAACTGCTGCATTTGCGATGAACCGTATCATAATATGAAGCTACTTATGCAACATATGAATGTGCATTACAGGAATTTTATATGCACGATTTGTGGCGCTGGTTTTGTCAATAGCTTCCGATTGCTAAGACATGAAACCACGCATGAAAAAAAGAAGTCTAGCTTTCCTTGCAAAGAGTGTGGGGCGGTATTCCCAGCCGATTCTAAACGTCTTGCTTTAAAGCGTGGAAAAGAACGCACTGTAAGTACTAAATCTAATCTGAATGTTGTTATCGAGGAAAACAAAGATTCTAAGCGAGGAAAAGGGAGGAAGGGCTCTAAAGATGATAAGGATTGTGATCCTAAAGATAGAAGTGCTCGTAATGTGCCTAAAATAGATGATGGTAGCGTTCACGAGGGTAGAAAGACTAAATCCGGAAAGAATAAACATAATGATGCCACTACCACTCATAAGTCAATTTTGTCTAGAAGAGCTGATGTGGTCAATACCCCAAAAGTCTCTGAACAGTCTAGGAGAAAATCTACGGAGGATGTAATAGAAATCCTTGAATGTACTCCGAATCATAAAGAGGTACTGTCGCGATATCGTATACCGAAGCGTTTGAGACAAGACGACGATGCTACGCAAGAGAGAGGGAGTAAGCGTTCTAGAAACTACAAGGATAATAGGCATTCTACCGACACAACATCCAAGGGGCGTTTTACAAAAGAAGTTGATTTATTTGCTCCGTATACAAGCACTAACTATTCTAGGAAAGCTGTAGATATTAACGTGCCTGAGACTAGCAAGACTGTTACTAAAAACGATGCGTCAAATATTCCATCGACAAACAAAACTCGTTCTCAGAATGAAGCTATAAATAAACCGTCTACTAGTCAGAGCCGTTCTACTAAACATGTCGATAAACAAATGCCATCCACTAGCAAACTTCGCAAtgaaaaatatactaatatgGATATGCCAACTAATAACACAGCTACTTCTAAAGaagttgttaaaaataagCCACCCACTAGTACAGCTCGTTCCGTTTCTATGAAAAAAGTCACATTTAATTTACCATCTACAAGCAATGCGCCTTGCAGAAAAGAAAACTCTAATAAGTCATTAACCAGTAAGAATCGGTCTAAGAAAGATGATATAGATATTGCTACTAGCGATACTACTGCAAGGAAATCCGGAAACCGACGTTCGtccaataaaaatgaaagtgACGTTATTCAAGATAAGTCCAAAGACGCGAAAAATATCACTTCTAATGGCATTGAAAGTCCTGGAAATGAACGTGAGACTGTTATTAAAATTGCACCAAAAAGTAGCAGTGACGATATAAATTATGAAACTACGAACACATCCGAAGAAGCTGCTGTATTAATGGTAGAACCAAGAAAGAAGAAACGTAGATATATCAGAGTCAAAGATAGGTTCGATGCTGTCATCACAGCAGCCAAAGAAGAGCAATCCGAGCTAAATAAACACCGTCACAACGTTCGTATGATACTTCTCAATTCTAACGCAACTCCCATACAAAAACACAATGAAGCTGGCTTTAGATGCGGGTTCTGTGCAGAACAATTCCTTGCTGCAGCTGATCTTAAAGTTCATACCTTGGACGAACACGATGATGAGTGCACCAAGACGTTTATGAGTGCAGCCATACTGTACAGTTACGTCGTCAAACTAGACATCACTTCTCTGAGATGCATTTGCTGTACAAGAAAAATATTCACACTAGAAAACCTTATGGAACATCTAGAGGTGAAACATAACAAGACTTTCTATAAAGAAGTGAAGAATCACATTCTTCCATTCAAATTCCAAAGTGATACCTTCACGTGTGTAACTTGTGATCGCAAATTCGACAGATTCCTACAGATGCAACGTCACATGAGTGTTCATTACAGGAATTATCTGTGCAACGAATGTGAAACGCCTTTCATTAACAAAGCGACATTGAGAACTCATATAACCCGCCATCAAAAAGAAGTTCTCCATAAATGCAAACACTGTGGCAAAACTTTCGacaccaaaaacaaatgtagcgTCCACGAGAAATACGTTCACGAGACGAGTCACAAGCGCAATAAATGCACGTACTGCTCGAAATACTTCGTGAGATACGTCAAAAAGATGGAGCATATGGTGGAAGTACATGGTCACAAGAAACGCGAAGTTAAATGCAACGCGTGTGCCAAAACGTTCACGACTAAAGAGAAGCTAACTAAACACCATAAAAGGGATCATCTTATGGAGAGAAATTACAAATGTGACCTATGCGATAGTAGCTTCTTTGATAACTATGATTTGACGAGGCACAAACGCACTCACGAGAAAGTACAACCGTTCAACTGTCATATATGCGATAAAAAGTTTACAAGGCGCGATAATATGTTGGAACATATAAGAATCCATACGCAGGAGTTTAGGAAATTCACATGTGATATTTGTGGGAACAACTATCCGCATTTGGCAAGGTTAAATGCGCACGTGAAGAGTTCCCATACGGATAAGAAAACAAAGCGTGCAAAACCAGCAAAGAAAGGCTCTTCTAAGAGCTctgatgataaaaaaaactcttctAGGAgTATCCTCACAGACTACAAACCCATAAAACTGGAAGTTGAATGGGATGTAGAACATTTGGAAATAGACATTAAAGAAGAAACTCCTCCGAATGatagaaagaaaagaaaaagaggTAGTAAGAGTAAGAGAGACTTAGACGAGCCACTCAAAATGAAAGCTAAAGCTGATGTTTTAGACGTTGATAAACACAGATACAACGTTAAAGCTATACTACTTTACTCAAACGCGACACCTATTAGAGCCCATTACGCAGGCAATGGATACGCGTGTTGTTTCTGcaaaaaatactttcataaAGCATCAGATCTTAAGGAACACACGCTCAAATCACACGACGATCAAACAAAAGCAAAATATATGCAAAAAGCTTTCCTATTCAAACTATTCGTCAAACTAGATATAACGCTACTTAGATGTACGCTTTGCACAACAGAAGTTATATTTAACACTCTAGAACAGCTCATAGAACATCTTAATTTAGCGCATCACAAAGGAATACATACTGATATTAAGAATCAAATCATGTGTTTCAAATTAGATGAAGAGGTTTTTCGATGTTTCATTTGCTCAGTTGAATATCACAGTTTCAAAAATTTACTCGAACACGCGCATACCCATTATAGAAACTTTATCTGTGAAACATGCGATGCGGGTTTCATAAATCGATTGAAACTCTACGGTCACgtgtataataaacataaaggtGCAGGCTCGCATAAATGCGGTACCTGTGAGAAAGTTTTCGATACACCCATCAAATTGAAGACGCATGAGAGAATTCACACCGGATCCGTTTTATACAAATGCCACGAATGTGGTGAGAAGTTTACTAAAAAGAAAGAGAAGAAAGATCATATGATAAAGGAGCACGGAGCTAAATTCGCTAGGATACAATGCACTGCTTGCGATAAAATGTTTATCAGCAAAGCTTCTTTGAGCGTTCATATAAATAGAGACCATTTGATGGATAGAAGACATCAGTGTGAGATGTGcgataaaaccttttttaccTCATCGTTTCTTAGAGATCATATGGTATCACATTCTAGAGTCAGAGAGATACAGTGTGACGAGTGCCCTAAAACTTTTGCTAGGAAGAAAGCGTTAAGGGAACACATGAAATCACATACTGGTGATCGGAGATTTAAATGCACGTTTTGTGATATGGCGTTTCTGCAGAAGTGTAGCTTGAAAGGACATTTGAGGAGTCGCCATGATGCGGAGTtgccatag
Protein Sequence: MKKQWHNLTTILHFSNATPFKDRNDAGYICAYCYESYPDPVVLRAHTQADHQDEKRTYKAGSAVNNFIAYLDIVDLKCTICDTPKQDLKTLIEHLVAAHQKEYYLGETDYFIPFKLTDEIQMNCCICDEPYHNMKLLMQHMNVHYRNFICTICGAGFVNSFRLLRHETTHEKKKSSFPCKECGAVFPADSKRLALKRGKERTVSTKSNLNVVIEENKDSKRGKGRKGSKDDKDCDPKDRSARNVPKIDDGSVHEGRKTKSGKNKHNDATTTHKSILSRRADVVNTPKVSEQSRRKSTEDVIEILECTPNHKEVLSRYRIPKRLRQDDDATQERGSKRSRNYKDNRHSTDTTSKGRFTKEVDLFAPYTSTNYSRKAVDINVPETSKTVTKNDASNIPSTNKTRSQNEAINKPSTSQSRSTKHVDKQMPSTSKLRNEKYTNMDMPTNNTATSKEVVKNKPPTSTARSVSMKKVTFNLPSTSNAPCRKENSNKSLTSKNRSKKDDIDIATSDTTARKSGNRRSSNKNESDVIQDKSKDAKNITSNGIESPGNERETVIKIAPKSSSDDINYETTNTSEEAAVLMVEPRKKKRRYIRVKDRFDAVITAAKEEQSELNKHRHNVRMILLNSNATPIQKHNEAGFRCGFCAEQFLAAADLKVHTLDEHDDECTKTFMSAAILYSYVVKLDITSLRCICCTRKIFTLENLMEHLEVKHNKTFYKEVKNHILPFKFQSDTFTCVTCDRKFDRFLQMQRHMSVHYRNYLCNECETPFINKATLRTHITRHQKEVLHKCKHCGKTFDTKNKCSVHEKYVHETSHKRNKCTYCSKYFVRYVKKMEHMVEVHGHKKREVKCNACAKTFTTKEKLTKHHKRDHLMERNYKCDLCDSSFFDNYDLTRHKRTHEKVQPFNCHICDKKFTRRDNMLEHIRIHTQEFRKFTCDICGNNYPHLARLNAHVKSSHTDKKTKRAKPAKKGSSKSSDDKKNSSRSILTDYKPIKLEVEWDVEHLEIDIKEETPPNDRKKRKRGSKSKRDLDEPLKMKAKADVLDVDKHRYNVKAILLYSNATPIRAHYAGNGYACCFCKKYFHKASDLKEHTLKSHDDQTKAKYMQKAFLFKLFVKLDITLLRCTLCTTEVIFNTLEQLIEHLNLAHHKGIHTDIKNQIMCFKLDEEVFRCFICSVEYHSFKNLLEHAHTHYRNFICETCDAGFINRLKLYGHVYNKHKGAGSHKCGTCEKVFDTPIKLKTHERIHTGSVLYKCHECGEKFTKKKEKKDHMIKEHGAKFARIQCTACDKMFISKASLSVHINRDHLMDRRHQCEMCDKTFFTSSFLRDHMVSHSRVREIQCDECPKTFARKKALREHMKSHTGDRRFKCTFCDMAFLQKCSLKGHLRSRHDAELP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -