Cv-a018147.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chloroclystis v-ata
Gene Symbol
-
Assembly
GCA_963691955.1
Location
OY829907.1:14138427-14149264[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0038 0.27 12.2 0.0 2 23 263 284 263 284 0.96
2 17 0.27 19 6.4 1.4 1 21 289 309 289 313 0.92
3 17 0.0027 0.19 12.7 1.3 2 23 414 436 413 436 0.93
4 17 0.59 41 5.3 0.1 1 19 442 460 442 464 0.79
5 17 0.044 3 8.9 0.1 1 23 473 496 473 496 0.89
6 17 9.3e-06 0.00064 20.4 5.6 1 23 501 523 501 523 0.98
7 17 0.00048 0.033 15.1 4.5 1 23 529 551 529 551 0.97
8 17 3.6e-05 0.0025 18.6 2.9 1 23 557 579 557 579 0.98
9 17 1.3e-06 9.1e-05 23.1 0.7 1 23 585 607 585 607 0.97
10 17 0.0017 0.12 13.3 4.8 1 23 613 635 613 635 0.99
11 17 0.0017 0.12 13.3 4.8 1 23 735 757 735 757 0.99
12 17 0.0017 0.12 13.3 4.8 1 23 857 879 857 879 0.99
13 17 0.0017 0.12 13.3 4.8 1 23 979 1001 979 1001 0.99
14 17 0.0017 0.12 13.3 4.8 1 23 1101 1123 1101 1123 0.99
15 17 0.0017 0.12 13.3 4.8 1 23 1223 1245 1223 1245 0.99
16 17 0.0004 0.027 15.3 4.8 1 23 1363 1385 1363 1385 0.98
17 17 2.4e-06 0.00017 22.3 1.2 1 23 1391 1413 1391 1413 0.98

Sequence Information

Coding Sequence
ATGGAAGTCGTCTTGTATAATTCGACCGTTTGTAGAATATGTGGAGAAGAAAACGACAAtggaacatttttatattcaactgaagaaaattctcagaacatcaGCGATCTCGTGAATGCTTATTTGCCTATCAAGgtaTCGGACGACGGAAAACTACCTCGAACTATATGTCCAGGGTGCACAATACAGCTTGAAGCTACAGTGGAATTTATAAACTTGATTATTACTGGCCAGAAAGCAATAAGGAGCCTCTATGTAAGAGAAAAAGAATACAAGAAAAATGTGAGCAAATCAGTAGCTAATGAAACGGATAGCTTGATTATTCTTGatgCAGAtccaacaaaaacaaatggaGCTTACCAGGAGAATCATCCCATCTCACTACAAGTGGCCGGCTTAGACAAGCCGAAGAGGAAACGAGGCCGCCCTCCAAAGAAGATCAAGACACCAGAAGAAGAGGCCCTTGAGATAGAGATTATAGAGAAGGAGATTAAAGCTAAACCTAAAGATGAAGAACCAACAGGGAAACGGAGACGGAAAACTCCGGAGAGGTTTAAAGAAGTGGTTCAGgGCAAAGAACTTGATCAAATATTCAAAGAGGAAGGTATGACGGACGGAGAGTCGACTGAAGATGAACTGAAGGTGGAGAAACCCAAGCCTCCGAAGGATGTCGTGCAGAAAGCACCTGAAGTGATCGGGCACACATCGGTGTCAGGCGAAGTGATCGCTGTGTTGAAGGGCAAAGGCAGAGGCAGACCAAAAGGACGCACGAAACAAACACGCGAGACTTGCCCCATCTGCGGAGTGGAGTTCTCTAACGCGGGCCGCTACATGTCGCACATCGCGCAGCACGGACCCGTGCGCTACCAGTGCCGCGTCTGCGCGAGCCGCTTCTCCACGCGCCTGTACTTCACCCAGCACCAGCAGGATACGGGCCACAACGGTATGATTGTTCTGACAGGCAGTGAGGAGTTTGCCGTTGTTTCTTCAAGATCATCAGTTCAAGAGCTGCCCACCACAGACAGCCCGTTGCAAGCTGAGGCCGAGACCTTCTCCACCGTTGACCCTCAAGTGGTTCAGGTGGATCCGGCGGCGACCACGGCGCTGCCGGACCTCGACCCTCAGCCGGAGGACCAGCTGCTGAAGATGAAGGTCCAAAAGCAGGCGCAACCTGCCAACAACGTGATCAAAGTTCCTCGGGCCAGACCGATTAAGAAGCCGAAGCCGGGTGACAAACTGAAGTGCCCGCACTGCGGCAAGAGGTACAACAGCAAGCAAGCCAAGTCTATGCACATAAAGGCGGTGCACAAAGGCGAGCGTCCGTACGTGTGCGCGGAGTGCGGCGCCACGTTCGCGTACCCGCGCGCGCACGCGCAGCACGCGCTCGCGCACCGCGCGCACCGCCAGGCCGGCGGGTTCGCCTGCGACCTGTGCGGGAAGGTGCTGAACCACCCGTCGTCGGTGGCGTACCACAAGGAGGCGGAGCACGCCAACCAGCGCTACGTGTGCAACAAGTGCGGCAAACACTTCAAGCACCGCCAGCTGCTGCAGCGCCACCAGCTCGTGCACACGCAGGCGCGCCCCTTCCACTGCaagGTCTGCAACGCTCATTTCAAGACGAAAGCAAACCTACTGAACCATCAAATGCTACACACAGGAGTAAAGAGGTTTTCATGCGATGAATGCAAGCAGAGATTCGCGCACAAGACCAGTTTAACCTTGCATATGCGGTGGCATCGagGTCTTAAGCCCTTCGCCTGCAAGTTTTGCGACAAGGCGTTCACGCAGAAAGGCAATCTGTCGGAGCATCTCCGCATCCACACCGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGGTCACATTCTATACAATACAGCAAGGCGAGAAGCCCTTCCAGTGCACGCTCTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACCTGCGGCGACACGACCCCAAGCCTCTCAGAACTAGGTGAAACAACGTCCATCGTCAGCGAGCATGGAAACATCATCCACCTCACTATCAACACATCGGCGCCCTGTCCCACGGTTCCCACGGCTTCCACGGGTCTCACGGCTTCCACGGGTCTCACGGCGACCACGGTTCCCACGGGTTTCACGGCTACCACGGTTTCCACGGTTCCCACGGCTCCCACGGGTCTCAAGGGCCCCACGGGCCACAAGTGCCCACATTGCCCACGCGTGTGTCCCACGCGCTGGACGCTGTCCAAGCACCTGAGACTGCACACGGGAGAAAAGCCCTTCCAGTGTCCGCACTGCGCTAGAATGTTTGCTGATGCGTCGAActtgaataaacataaaaagATTCACAAGAAGACATCCCTGCTAGCGGTGCAGCCCCCgcgcgcccccgcccccgcccccctgTCCCCCCTGTCCCCGCTGCCCGCGCACTACGTGGTGCACGCGGAGCAGGACGAGCGCGTCATATACGTCACCTACGACGTTAACGCGCCCGGACAAGACTATCAGATCATGGACACTGAACAGAATGAGGTAATCCTCGGTTCTCCGGGCGAGGAGCTGTACTCGGGCGACTCGCTGCTGCTGGAGGCCAAGCAGGAGGAACCGGAGCACATGTCGGTGACAGACGAGGAAGGCAACCCGCTACACTTCACGATGCAGGACGGCACGCGCCTCGCCATCACGTCGCTCGACGGACAGTCACTGCAGGTGATAACGCAGGATGGGCAGACGATCCCGGTGGAAATCAACGGATTCGGGCAGGAAGACGATGAATGTGCTCTGACGGAAGTTTCAGAGTCGGGAGGGAGGGACGAGGACGGAGCCGTTACCCGCTACTACACAATCGAATCTCCCACGCCGGAAACAGTTCAAGAACTAGGATTAAAAGATGATGAAACTCCAGTTACCCGTTATTACACAATTGTATAA
Protein Sequence
MEVVLYNSTVCRICGEENDNGTFLYSTEENSQNISDLVNAYLPIKVSDDGKLPRTICPGCTIQLEATVEFINLIITGQKAIRSLYVREKEYKKNVSKSVANETDSLIILDADPTKTNGAYQENHPISLQVAGLDKPKRKRGRPPKKIKTPEEEALEIEIIEKEIKAKPKDEEPTGKRRRKTPERFKEVVQGKELDQIFKEEGMTDGESTEDELKVEKPKPPKDVVQKAPEVIGHTSVSGEVIAVLKGKGRGRPKGRTKQTRETCPICGVEFSNAGRYMSHIAQHGPVRYQCRVCASRFSTRLYFTQHQQDTGHNGMIVLTGSEEFAVVSSRSSVQELPTTDSPLQAEAETFSTVDPQVVQVDPAATTALPDLDPQPEDQLLKMKVQKQAQPANNVIKVPRARPIKKPKPGDKLKCPHCGKRYNSKQAKSMHIKAVHKGERPYVCAECGATFAYPRAHAQHALAHRAHRQAGGFACDLCGKVLNHPSSVAYHKEAEHANQRYVCNKCGKHFKHRQLLQRHQLVHTQARPFHCKVCNAHFKTKANLLNHQMLHTGVKRFSCDECKQRFAHKTSLTLHMRWHRGLKPFACKFCDKAFTQKGNLSEHLRIHTGEKPFQCTLCPRRFTTSSQHRLHLRRHDPKPLRSHSIQYSKARSPSSARSVRAASPPPRSTACTCGDTTPSLSGHILYNTARREALPVHALSAPLHHLLAAPPAPAATRPQASQVTFYTIQQGEKPFQCTLCPRRFTTSSQHRLHLRRHDPKPLRSHSIQYSKARSPSSARSVRAASPPPRSTACTCGDTTPSLSGHILYNTARREALPVHALSAPLHHLLAAPPAPAATRPQASQVTFYTIQQGEKPFQCTLCPRRFTTSSQHRLHLRRHDPKPLRSHSIQYSKARSPSSARSVRAASPPPRSTACTCGDTTPSLSGHILYNTARREALPVHALSAPLHHLLAAPPAPAATRPQASQVTFYTIQQGEKPFQCTLCPRRFTTSSQHRLHLRRHDPKPLRSHSIQYSKARSPSSARSVRAASPPPRSTACTCGDTTPSLSGHILYNTARREALPVHALSAPLHHLLAAPPAPAATRPQASQVTFYTIQQGEKPFQCTLCPRRFTTSSQHRLHLRRHDPKPLRSHSIQYSKARSPSSARSVRAASPPPRSTACTCGDTTPSLSGHILYNTARREALPVHALSAPLHHLLAAPPAPAATRPQASQVTFYTIQQGEKPFQCTLCPRRFTTSSQHRLHLRRHDPKPLRSHSIQYSKARSPSSARSVRAASPPPRSTACTCGDTTPSLSELGETTSIVSEHGNIIHLTINTSAPCPTVPTASTGLTASTGLTATTVPTGFTATTVSTVPTAPTGLKGPTGHKCPHCPRVCPTRWTLSKHLRLHTGEKPFQCPHCARMFADASNLNKHKKIHKKTSLLAVQPPRAPAPAPLSPLSPLPAHYVVHAEQDERVIYVTYDVNAPGQDYQIMDTEQNEVILGSPGEELYSGDSLLLEAKQEEPEHMSVTDEEGNPLHFTMQDGTRLAITSLDGQSLQVITQDGQTIPVEINGFGQEDDECALTEVSESGGRDEDGAVTRYYTIESPTPETVQELGLKDDETPVTRYYTIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-