Cv-a016963.1
Basic Information
- Insect
- Chloroclystis v-ata
- Gene Symbol
- Zfy2
- Assembly
- GCA_963691955.1
- Location
- OY829907.1:127477-130298[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0038 0.26 12.2 0.5 1 23 142 164 142 164 0.97 2 15 4e-05 0.0028 18.4 0.9 2 23 169 190 169 190 0.96 3 15 3.9e-06 0.00027 21.6 1.7 1 23 196 218 196 218 0.97 4 15 0.00059 0.041 14.8 0.1 1 23 223 245 223 245 0.97 5 15 3.4e-06 0.00024 21.8 0.3 1 23 251 273 251 273 0.98 6 15 4.7e-06 0.00032 21.4 0.4 1 23 279 301 279 301 0.98 7 15 0.00021 0.015 16.2 2.0 1 23 307 329 307 329 0.96 8 15 3.6e-05 0.0025 18.6 0.3 1 23 334 356 334 356 0.98 9 15 0.15 10 7.2 0.6 1 23 361 383 361 383 0.96 10 15 4.4e-05 0.003 18.3 2.0 1 23 413 435 413 435 0.98 11 15 0.00039 0.027 15.3 2.4 1 23 441 463 441 463 0.97 12 15 6.2e-07 4.3e-05 24.1 1.2 2 23 470 491 469 491 0.95 13 15 5.7e-05 0.0039 18.0 4.5 1 23 497 520 497 520 0.95 14 15 3.8e-05 0.0026 18.5 3.4 1 23 526 548 526 548 0.98 15 15 0.0024 0.17 12.8 1.7 1 19 554 572 554 574 0.96
Sequence Information
- Coding Sequence
- ATGTTAGAGCTGGTCTGCCGTGTGTGTCTCGCTAGTGATGCGAAAATCTACAATATCAGCAACAATCGCCTTTCGGAAATGTACAACAAACTCACGAATGCTCAGGGTTGCTCAGAAGACTCTGCCCCGCGCTATGTGTGCTACATCTGCGTGTCTCGGCTGCAGACCTGTCTCCGGCTGACGGACACGGCGCAGCGCTCACACAACTACCTCACAGACATACTGATCAACAAACTGGagATCACAAAGGCAACAGTAGCATCCCTCAACATAACGACCGCGCGCTTCCTCACGACACACGCGCTAGAGCCCGTCTCGTACGTCCCACACGACGACGGTCTGACGGTCAAGGAAGAGCTCGTAGACAACGAAGAAATATTCACTAAAGTCGAATCTATAACTGAACATATAAAAACAGAAGCATTCAACTGTAGCGAATGCGACTTAAAGTTCCTTAACAAGAACCTCCTCATATCACATGTTAAAGTTCACAATAAACGCGCgtattgtaaaaaatgtaaCAAGTCCTACTCTACTGTCAGCGCTCTGAAAGGCCACATGACCATTCACACGGGGGAGAGGCCGTTCGCTTGCCATATATGCAGTAGAACTTTCAGACGGAAGCCTTATTTAGAAGGCCATATACGAATGCATACGGAGAAACCATATTTCTGTAACACGTGCAAGATCGGTTTCATAGAAGCGGACGGTTTGAAAAAACACATGGTCGTACATTCTAAAGGCAGACCGTTCGTGTGCAGCCAGTGCGGACTGGGGTTCCCCTATAAGAGCTCTCTGGACAGACACCAAAGAGTCCACACCGGTATCAAACCTTTTTCCTGTAACAAGTGTAAGAACTCGTTCGCCGATCAGAGCGGGCTGGCCAAACATATGCTCATCCATGAAGGTTCGAAGCCGTTTCCGTGTCGGATGTGCGAGTCCACGTTCAGACATGCGGCTAGTTTGAAAAGACACATGTATCTACATATACGGAACCCTTTCGTATGCAACGTCTGCGATTCGACCTTCGACGAAGAGAATAACTTGAATACACATATGCGGGAGCACAGAGAGATGATATTCAATTGCGAGAAATGCGAGCTGAAATTCGATATATACACTATGTATGTAAAACATTTAGAAATACATGGTCAAGTGAAGGATAGCAAGCCGGTGCCTTCATCGACGAGAATCATCCTGGAGGCCGCCGACGGACGGCGGAGACAGAAGCGGACGCACACCTGCTCGCTCTGCAACAAAGAGCTGATCAGTAACGCGCACCTCACCATCCACATGCGCGTGCACAACAACGAGCGGCCCTTCGCCTGCGACCTGTGCCACAACAAGTTCCGGACCAAGGCGGTCTTACAGGCGCACAAACGGACTCACACCGGGGAGAAGGTCTGCTCCTGCGAGATATGCGGCAAATCCTTCTCACAGACCGGCAGTCTGAACAAGCACATGGTGATACACACGGGCGCGCTGCCGCACGCGTGTCACCTGTGCGATAAAGCGTATAAACAGAGTTGCCAGCTGACGGCTCACATCAGGAACATACACGACGGTATCAAAAGGTTTTCCTGCGACCTCTGCAGTACCAGGTTCACGGCCAAGACTCACCTCAGAAGACACATGAACATTCACGCCGGGATTAAGCCGTTCAGTTGTGTGAAGTGCTCTCTTAAGTTTTCTACTCGGACGTCTTTGAAGAGGCATTCAACTAACTCTTGTAAATAG
- Protein Sequence
- MLELVCRVCLASDAKIYNISNNRLSEMYNKLTNAQGCSEDSAPRYVCYICVSRLQTCLRLTDTAQRSHNYLTDILINKLEITKATVASLNITTARFLTTHALEPVSYVPHDDGLTVKEELVDNEEIFTKVESITEHIKTEAFNCSECDLKFLNKNLLISHVKVHNKRAYCKKCNKSYSTVSALKGHMTIHTGERPFACHICSRTFRRKPYLEGHIRMHTEKPYFCNTCKIGFIEADGLKKHMVVHSKGRPFVCSQCGLGFPYKSSLDRHQRVHTGIKPFSCNKCKNSFADQSGLAKHMLIHEGSKPFPCRMCESTFRHAASLKRHMYLHIRNPFVCNVCDSTFDEENNLNTHMREHREMIFNCEKCELKFDIYTMYVKHLEIHGQVKDSKPVPSSTRIILEAADGRRRQKRTHTCSLCNKELISNAHLTIHMRVHNNERPFACDLCHNKFRTKAVLQAHKRTHTGEKVCSCEICGKSFSQTGSLNKHMVIHTGALPHACHLCDKAYKQSCQLTAHIRNIHDGIKRFSCDLCSTRFTAKTHLRRHMNIHAGIKPFSCVKCSLKFSTRTSLKRHSTNSCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -