Basic Information

Insect: Chloroclystis v-ata
Gene Symbol: -
Assembly: GCA_963691955.1
Location: OY829903.1:2915504-2925177[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.077 5.3 8.1 0.5 1 23 243 267 243 267 0.97

2 32 0.011 0.75 10.8 0.4 6 23 295 313 295 313 0.96

3 32 0.42 29 5.8 0.1 1 10 320 329 320 340 0.91

4 32 0.0039 0.27 12.2 0.3 3 23 349 371 347 371 0.95

5 32 3.9e-05 0.0027 18.5 0.7 1 23 377 401 377 401 0.97

6 32 0.0012 0.085 13.8 1.9 1 23 407 429 407 430 0.93

7 32 0.0012 0.085 13.8 1.9 1 23 451 473 451 474 0.93

8 32 0.0012 0.085 13.8 1.9 1 23 495 517 495 518 0.93

9 32 0.0012 0.085 13.8 1.9 1 23 539 561 539 562 0.93

10 32 0.0012 0.085 13.8 1.9 1 23 583 605 583 606 0.93

11 32 0.0012 0.085 13.8 1.9 1 23 627 649 627 650 0.93

12 32 0.0012 0.085 13.8 1.9 1 23 671 693 671 694 0.93

13 32 0.0012 0.085 13.8 1.9 1 23 715 737 715 738 0.93

14 32 0.0012 0.085 13.8 1.9 1 23 759 781 759 782 0.93

15 32 0.0012 0.085 13.8 1.9 1 23 803 825 803 826 0.93

16 32 0.0012 0.085 13.8 1.9 1 23 847 869 847 870 0.93

17 32 0.0012 0.085 13.8 1.9 1 23 891 913 891 914 0.93

18 32 0.0012 0.085 13.8 1.9 1 23 935 957 935 958 0.93

19 32 0.0012 0.085 13.8 1.9 1 23 979 1001 979 1002 0.93

20 32 0.0012 0.085 13.8 1.9 1 23 1023 1045 1023 1046 0.93

21 32 0.0012 0.085 13.8 1.9 1 23 1067 1089 1067 1090 0.93

22 32 0.0012 0.085 13.8 1.9 1 23 1111 1133 1111 1134 0.93

23 32 0.0012 0.085 13.8 1.9 1 23 1155 1177 1155 1178 0.93

24 32 0.0012 0.085 13.8 1.9 1 23 1199 1221 1199 1222 0.93

25 32 0.0012 0.085 13.8 1.9 1 23 1243 1265 1243 1266 0.93

26 32 0.0012 0.085 13.8 1.9 1 23 1287 1309 1287 1310 0.93

27 32 0.0012 0.085 13.8 1.9 1 23 1331 1353 1331 1354 0.93

28 32 0.0012 0.085 13.8 1.9 1 23 1375 1397 1375 1398 0.93

29 32 0.0012 0.085 13.8 1.9 1 23 1419 1441 1419 1442 0.93

30 32 0.0012 0.085 13.8 1.9 1 23 1463 1485 1463 1486 0.93

31 32 0.0012 0.085 13.8 1.9 1 23 1507 1529 1507 1530 0.93

32 32 0.31 21 6.2 3.6 1 23 1536 1561 1536 1561 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.077	5.3	8.1	0.5	1	23	243	267	243	267	0.97
2	32	0.011	0.75	10.8	0.4	6	23	295	313	295	313	0.96
3	32	0.42	29	5.8	0.1	1	10	320	329	320	340	0.91
4	32	0.0039	0.27	12.2	0.3	3	23	349	371	347	371	0.95
5	32	3.9e-05	0.0027	18.5	0.7	1	23	377	401	377	401	0.97
6	32	0.0012	0.085	13.8	1.9	1	23	407	429	407	430	0.93
7	32	0.0012	0.085	13.8	1.9	1	23	451	473	451	474	0.93
8	32	0.0012	0.085	13.8	1.9	1	23	495	517	495	518	0.93
9	32	0.0012	0.085	13.8	1.9	1	23	539	561	539	562	0.93
10	32	0.0012	0.085	13.8	1.9	1	23	583	605	583	606	0.93
11	32	0.0012	0.085	13.8	1.9	1	23	627	649	627	650	0.93
12	32	0.0012	0.085	13.8	1.9	1	23	671	693	671	694	0.93
13	32	0.0012	0.085	13.8	1.9	1	23	715	737	715	738	0.93
14	32	0.0012	0.085	13.8	1.9	1	23	759	781	759	782	0.93
15	32	0.0012	0.085	13.8	1.9	1	23	803	825	803	826	0.93
16	32	0.0012	0.085	13.8	1.9	1	23	847	869	847	870	0.93
17	32	0.0012	0.085	13.8	1.9	1	23	891	913	891	914	0.93
18	32	0.0012	0.085	13.8	1.9	1	23	935	957	935	958	0.93
19	32	0.0012	0.085	13.8	1.9	1	23	979	1001	979	1002	0.93
20	32	0.0012	0.085	13.8	1.9	1	23	1023	1045	1023	1046	0.93
21	32	0.0012	0.085	13.8	1.9	1	23	1067	1089	1067	1090	0.93
22	32	0.0012	0.085	13.8	1.9	1	23	1111	1133	1111	1134	0.93
23	32	0.0012	0.085	13.8	1.9	1	23	1155	1177	1155	1178	0.93
24	32	0.0012	0.085	13.8	1.9	1	23	1199	1221	1199	1222	0.93
25	32	0.0012	0.085	13.8	1.9	1	23	1243	1265	1243	1266	0.93
26	32	0.0012	0.085	13.8	1.9	1	23	1287	1309	1287	1310	0.93
27	32	0.0012	0.085	13.8	1.9	1	23	1331	1353	1331	1354	0.93
28	32	0.0012	0.085	13.8	1.9	1	23	1375	1397	1375	1398	0.93
29	32	0.0012	0.085	13.8	1.9	1	23	1419	1441	1419	1442	0.93
30	32	0.0012	0.085	13.8	1.9	1	23	1463	1485	1463	1486	0.93
31	32	0.0012	0.085	13.8	1.9	1	23	1507	1529	1507	1530	0.93
32	32	0.31	21	6.2	3.6	1	23	1536	1561	1536	1561	0.94

Sequence Information

Coding Sequence: ATGTTTGCTTCTCAGGACATAGGGGCAAGAAAAGTATTTCAAAAGCCAAACATTCTTAGGAGAAAGCCTGCTAAGAAGAAGGGAACACTTAAAACAGTTTTGCAGGAAGATAAACAAGTGAAGAGAGTACAGGTTTCCGGAAACCTTCCCAGCAATTTGTTAAATCAAGATGACTTTTCTAGTTTTTGTCATGAAAAAATTACCTGGGGATTAGAAGAAGTTGTTCAGCCGGCTCAACAGTCTAATAGTTTtactattaaaaatgtaagcaaGCCAACTGAAGAATTAGAAGAAAATGAAACAAGATCTTCAGAAAGCCATTTAAGAAACTCACAAATCAAACCAGAGTATTTATTCTTCAGGAAACCAACTCTTCACAGCCAAGAATACAATAATGAGGAGGAGGAGAGTTCTATAAATATAGAATCGTTCTTGgtgaatagcaaaaaaaagAATACCATGCCAAATGACCAGAACCATTCAACAGGAAGGAATATGGAGACTGATGTAGAAAATAAATGGTGCCTTAATTTTATGAGTGAAGATTTGAAAGACATGGTCATGCCAAATTTTTATGATCCAGCTCAGCTGAAAATATCTAATGAGAATAGCAAAGATGTGGAGCTTACATCAAAACCCAATGAAATTAGTTCTTCCAAGGATTCACCAAATGTATCAGAACAAGAAATGATTATtcaaagttgtttaaatagTAGAGTTGTCAAGTATAAGTGTGATGTACCAAACTGCAACAAAAGCTTCTGGAATGACGCGAGGCTGCAGAAGCACAAACAGATCCATAACAAACAGAAAAGTCCCAATGTGCCGGGCATCATCGAGTGTCCGGTCAAGCAAGTGGATGACGATGGGCTGGAGCAGCCCTGTGGACACATGTTCTCGTCTCGTGATGACCTCATGAAGCATTTGAACGAAGATCATGTGCCGGAGGATGCATCTTATAAATGCGAGGAATGCGGCCGTCATTTCTGGTGGGCAACGGGCTTGCGGACACACGCACAGTCCACGTGCACGCGCGCCCTGCTCTGTCCCTGGTCGGGCTGCGGCCGCGTGTTCCGCCAGCCCTGCCGCCTGCGGGAGCACGCCAGGGCCCACAACGGGGACCGCCCCTACCCCTGCAACTATCCCAACTGCGGTTGGGCCTTCCGTTCGGCCAGCAAGCTGCACCGACACGCGCGGCGGCACACGGGCGAGAAGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTACACGCCACATTACTATAACGCGGCACGAGTGCGCGGCGTGCGGGCGCGCCTTCCCGCGCCGCGACCACCTGCGCGACCACGCCGCGCGACACCACGCGCCGCGCCAGCCGCACCACTGCACCGTGGAAGGTTGCGAGCAGGCCTTCGCCAATACAAACTCACTATGCATGCACTTGAAGAAGGTGCACAATGTTGTCAACAAGAAAACTGCAACTTCCAAAAAGCCAGCAGTGAAAAAACCTGTTGCACCTAAGAAACCAGCGTCACCTAAGAAGGTGGCAACACCTAAAACTCCTAAGAAAGTGGCCAAGTCTGCGCCTAAGAAAACAAAAGTTATGATAAGGCTGGAAGTAGAAGGTTTACCGGAAGCTGCAAGTGTGCCGGAGCTGAAAATGCCAGAAACCAAAAATATGCTTATGATGACTTTAGACGGTGGTGCCCTTATCAAATACGGCTACGGCGACCCATCATTCACTCTCTCTGACGCCATTGAAACAGCCAAAGCTAGTGTTATTATAGAACGGGAAACACATTTAAAAAGAGAAATTCACACTTTTAACCAATTGgaaaatgaacatggacaaTTGTTGAATGAACATGATCAAGTTTTGAACGAACATGTACAAATTATGAATGAACAAGGACAAGTGGTCAACGAACATGGACAAATAGTCGATGAACATGGACAATTATTGGATGAACATGAACAATTATTGGAGGAACATGAACAGCTATTGGATGAACATGAACAATTATTGGATGAACATGGTCAAATTGTGACTAACGAAGAACAATTGTTGAATGAAAATAGACAAATTGTGAATGAACATGATGAGCCAGAGAACGAACATGGCGAATTGATGAATGAATATATACAagagaaaagaaagaaaattgtgATTCCTTGTGAGTATGAGTTAGAAGGAAAATGTGCTCGGACACATTTTACTTGGCCACTACAAAGAGCACCTGGCAAACCTGAGGCTCAAACTGAACCAGAATTCAGCATTGAAGATGATACACAGgtGGAGCAGTGTGAAAACTCAGAGAACAACAATTATACAGTGCGGAGTGACCTCTTCCTTCATGGAAACGTGCTCATCAATGAAGATAGCGAGTTCATAATAAGGGAGAGCAACCGAGCGGGCGAGGCGGAGGAgggcggcgcgcgcctcgACCACCTCGGCCTCATCGACGCGCACCCCACCATCGACCTCATGCCGgacGAGTTGTACGCTGACGTGGCCGGAGATGAGTCTTCGTTTCGCGTTTTTATGCTGAACACAAACTATGAAGAACTCTCGTAA
Protein Sequence: MFASQDIGARKVFQKPNILRRKPAKKKGTLKTVLQEDKQVKRVQVSGNLPSNLLNQDDFSSFCHEKITWGLEEVVQPAQQSNSFTIKNVSKPTEELEENETRSSESHLRNSQIKPEYLFFRKPTLHSQEYNNEEEESSINIESFLVNSKKKNTMPNDQNHSTGRNMETDVENKWCLNFMSEDLKDMVMPNFYDPAQLKISNENSKDVELTSKPNEISSSKDSPNVSEQEMIIQSCLNSRVVKYKCDVPNCNKSFWNDARLQKHKQIHNKQKSPNVPGIIECPVKQVDDDGLEQPCGHMFSSRDDLMKHLNEDHVPEDASYKCEECGRHFWWATGLRTHAQSTCTRALLCPWSGCGRVFRQPCRLREHARAHNGDRPYPCNYPNCGWAFRSASKLHRHARRHTGEKRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGTRHITITRHECAACGRAFPRRDHLRDHAARHHAPRQPHHCTVEGCEQAFANTNSLCMHLKKVHNVVNKKTATSKKPAVKKPVAPKKPASPKKVATPKTPKKVAKSAPKKTKVMIRLEVEGLPEAASVPELKMPETKNMLMMTLDGGALIKYGYGDPSFTLSDAIETAKASVIIERETHLKREIHTFNQLENEHGQLLNEHDQVLNEHVQIMNEQGQVVNEHGQIVDEHGQLLDEHEQLLEEHEQLLDEHEQLLDEHGQIVTNEEQLLNENRQIVNEHDEPENEHGELMNEYIQEKRKKIVIPCEYELEGKCARTHFTWPLQRAPGKPEAQTEPEFSIEDDTQVEQCENSENNNYTVRSDLFLHGNVLINEDSEFIIRESNRAGEAEEGGARLDHLGLIDAHPTIDLMPDELYADVAGDESSFRVFMLNTNYEELS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -