Basic Information

Gene Symbol
Arid4b_1
Assembly
GCA_963691955.1
Location
OY829898.1:15618331-15631249[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-30 8.7e-27 93.8 0.1 1 89 12 98 12 98 0.96

Sequence Information

Coding Sequence
ATGTGTTTAAGTTCCGACGATGAACCCCGCGAAGAGAAGGACCACTTTGTTGCGCAGTTGTACAAGTTCATGGACGACCGCGGTACGCCGCTGAACCGTAATCCGACCAtcgctaacagagatatcgatcTCTACAGGTTGTTTAGGgtGGTACAAAAACTCGGAGGGTACAACCGGGTGACAAACCAGAATCAATGGAAATCTATTGCTGACAAAATGGGCTTCCATCCGGTTACAACAAGCATCACCAACCTGTGTAAACAGGCAtacaaaaaATTTCTACACAGCTTCGAGGACTTCTACAGGAAGCTGGGTGTGACGCTGGTGGCTCACCCGCGGGGCGCGCGCACGCCGCCCGCGGGCCGCTCGCTGATCCGCGACCGCGACAAGCAGCCGCCCACCTCCTCCTCCGCCTGCTCCACGCCCACGGGCCCACCTAGTCTGCGTGGCAAAGACAAAGACTCAGACAAGAGCGAAACTGACAGGAGCGAGAAAGACGACAAGTCGGAGAAAGGTGACAAAAAGGAGAAATCACAGGTCAGCGACGAAGAGGATAGTGCTGACAATCAGCCGCTCATCGTAAATGCACCAAAATTACTTGAAAAAGAGAAGGAGCGGGAAAAAGAAAAGGAGAAGGAGAAAGAAAAAGAGAAAGTCCCAGAGCGGGAGAAAGAGAAGGACAGTCACAAAGAGCGAGAGAAGAGTACATCAACCACCACTAGCGAGGAGAAAGTGCTTGTTATAAAGCCTAGACCGCGCTCACTGTCCAAAGCTAGGACAATTACTCCTTTAAAAGCTGAACGGACGCCGAAACGAAGACCTCTCTTGTCTAAAAGTGAAAGTGCTGGGCCAGGAATATCACGTGGTTCTAGGCGAACGCACGTCTCTACCGATAGCGACAGCTCTGTGTCTGGTCGTATTTCTAGATGTGGTCCGCTGACGAAAAAGATGCAAAGTCGTCGCAGTCAGAGCGCCAATTCTGCGAGCAGTGGCAACACCATAGCTTCGAACAGCAGCAAGCGTCCCCGAAAACGGAAAACTACAGAGCCGTCAGTAAACGAGCCTACTCCATCGAGTAGTACTGGGAGAGTAGTCTCTGCAGTAAAAGCCCAAGTTGGGGATAAATTGAAAGTGTATTATGGTCCCACACAATCTGAATCTAAGGTGACATATGAAGCGAAGGTTATTGAGATATCTGGGGAAGGCATGCTTCGGGTGCACTACACCGGCTGGAACACCAGATATGACGAATGGATTAAACCGCAGCGTATTGCCGTCAATGTATCGCAACATGAAGCGAGAAATAAAAAGGGCTCCAATATGAGTAGACGAGTAAGAGCCAAAAGAACAGAAGGTAAACCAATACACGAATCTTCAGCCATATCTGATTCTGATACTTCGGACAGCGACGAAGATATGAAAAGACCTCCCAAAAAGCTAGATGACAAATCTAACACAAGcaCGCCAAGATCAAAAGATACTAAATCGAGTGACAGCTCCAGTTCTAGCAAACCTCGCAAAAGACCCGTTAGAAACATTTCGACTCCTACAAACGTCTCACCAGCGAAAAAACTACGCCCTAACGCAGGCTCGCACCAAGGACGAGACTACGATCTCAATGAAATAAGATCAGAACTGAAAGGATTCAACACTGTAAAAACTGAACCCGAAGAAATCAAACAAGAATCTCCAGAACAGGAAACTACGGTTAATCCTACACAAATACCAATCCCTCCATCTGAACCTCCGCAGGAAAAGAGGAAGGAAGAAGACGTCTACGAGTTCAAAGAACCAGAACCATTTGAATTGGAACTTCAtgatgaaaagaaaaaacgCACTCACCGTATTTTCGATGATATATCTCCTAGTAAATACACAGCCGCTTTGTCAAAGTCTCTAAGCGAAGAAATCAGTGAAGATCCTATGAAACCTCGTACAAGTCTTAGGTCTCCGTCTTTGTCGCCGTACAGAGACTTCGCCGCCACTTCTGCCATTGGCAAGCAAAGCCCCGAAGACCAGGACTCAAAAGATGATCTATTTTCGCTCGATGATGATTCCTTCCACGGAGATGGCAGCTCGGGTCCTACTTTCGAAGGTTTCATACCAGCTAAGAACCAAGAAACTTACTCAAAGAAAAGCAAGGTCTTGAAACTACGACAATTAATTGATGATTCACCAGATAGCCCGGCAGATGATGAACAGTCATCTGATGATTCTGAAGACGTCGCTATGAAAGAAGATGACGATGATGCCTCTAAATCTGCTTCTCCTAATACGGTTAGCGCAGAAGATTCAAAATCTTCAGCATCGTCCGTTCAAGACGAACCAAAGGACCAAGATTTAGGTGACACCAAAATGGAAACCGGCACCGGTTCACCAACGGCGATGATGATAGATGTACAAAATATTCCTAAACCACCCAACACCCCTCCCCCGTtgcaaaatattgatatacCTATGAAAATTGAAGTGCCTAAGAAAATAGATACTCCTAAAAAGTTGGAGCTACCCAAAAAACCAGAACCTTTCAAAAAGACTGAACCTCCTAAAAAATTAGAACCGCAAAAGAAGGCTGAAGCACCTAAAAAGGTAGAACCACCCAAGAAACAAGAAGTTCCTAAAAAACCTGAGCTTACTAGGAAAATTGAGCAacctaaaaaaaatgaaaatccAAAGAAGGTTGATCCTCCGAAAAAAGTGGAGCTTACAAAAAAAGCGGAAACACCTAAAAAGATTGAGATTATACCTAAAAAGGTTGAGCTTCCCAAGGCATTTAAAGTTGAAAACGTCAAAAAAGTTGAAATACTCAAAAAATCAGAATCCCCTAAAAAGATTGAATTACCTGAAAAAGAAACCCCCAAGAAGATTGATCTAAGAAACATAGATCTTTCTAAAACCCCTGAAACTACTCCAATACCTAGCACTAGCATCCTTGCAGCAGCCAAAGAGAAAACACCAGAAGAAATTAAAGAAGAACAACTGAATCTCTTATCGATACCACTTCCCGCATCGGATCCTATACATGTTACACCTAAGAAACTAGACCCAGTAATATTCAAAACAAAGATGGAGCCACCTTCAAGTCCACTTATTGACGGCGAAGAAGATAAATCCGAGCCTGATAGTCCGGCGCGAATCGACGTTATCCCTGAACCACCTCCCGGTTTCTTATTACAATCCGAAGGTCCGAAAATCGCAGAGAAACTTCTCAAAGCTATCAGCAGTGCCAAGAGATTATCAATGTCACCTCCACCTCTGGACAATCGCACAAGCCCTGTTACTTCCAAGACAGATATACTTAAACCTGTTGCATCAGACACGAGACTATCCCCCATATGCCCTGAACCAAGAACCAGTGTGGTGAAAACGGATCCAGTGAAACCATTATTGAAGATAACAGAGGCAGCAAAGAAAGAAGATTCCATATTCGGAGAGCCAACTGCGATTATTGACAGTAAAGACTCCTTAGACGTAAAGAAAAAAGACGGTTCGTCAACTCCCAGACTGCAGAGTCCtttgaatattttagaaaGGAGGAAGAGTGTGGCTGCTGACTTGCCGTTGAACGTCGCTGGGAAGAACAACAAGGTGTTGAGTGATACAATTCAGAAGTTGTCTAGCCAGATCAATCAGTCGGCCACGGCAGCGTCCGTTGCAAATATCCCGCTGCCTTCTTCAACCGCGCCTTTCCTGTCCGAGGATAGAAGCGAGTCCAGTGATTCAGACGATTCTAGCAGAAGGTTAATAATCGACAAATTATCTATGGAAGAATGGGGCAGTGGGGCTAGCTCCGAGACCTCCCGACCGGCCCCGACCAACTCGGGCAACACGGGACTGAGACTGCATCTGGGGAAATCGCCCGGCGAATGGAGCGCGGGAGAGTCCTTGCTTATGTTGGAAGATGCTTGCAAGAATGAAAGGAAACATAGTGCAAGCGTAGTAGTAGCAGGCAGCGGTCGCGTGACCGCGGGCACGTCGCAGccggccgcgcccgcgccgccgcaggAGGAGGACAGCAACCTGTCCATACTGTTCTGTGAGGAGACCATCCCCGGCTCGCCCGCGCCCGACGCCGAGCCCACGCCGCCGAGGCAACGCCCGCATATGCCCTTCGCTTCAGCTTCGGCTCATCACCTGGCTAAagATGAGCGTCGAGGCTCGGCCGCACCGCAGGCGAACGGGCACgagggcgcggcgggcggggcggggccCGCACCGGCGGCGGGCGGGCGCGCGGGCTGGGGCCGCGGCCGGCTGCTGGTCGACAACACGCCGCCCACCACGCCCGACAGCAACCGGAGCAGCATAGAGATGTCGCCTCAAAGAGACAGACGACTATCAGAACGCGACAGTCCGTCAGAACGCAAAGACGAGGAGGATGAAAATAGCAGACCGGCTGACGCGTTAGTGGATATGGATAAACCAGCTCATAGTAAGTATTGA
Protein Sequence
MCLSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKSIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPTSSSACSTPTGPPSLRGKDKDSDKSETDRSEKDDKSEKGDKKEKSQVSDEEDSADNQPLIVNAPKLLEKEKEREKEKEKEKEKEKVPEREKEKDSHKEREKSTSTTTSEEKVLVIKPRPRSLSKARTITPLKAERTPKRRPLLSKSESAGPGISRGSRRTHVSTDSDSSVSGRISRCGPLTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKTTEPSVNEPTPSSSTGRVVSAVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISGEGMLRVHYTGWNTRYDEWIKPQRIAVNVSQHEARNKKGSNMSRRVRAKRTEGKPIHESSAISDSDTSDSDEDMKRPPKKLDDKSNTSTPRSKDTKSSDSSSSSKPRKRPVRNISTPTNVSPAKKLRPNAGSHQGRDYDLNEIRSELKGFNTVKTEPEEIKQESPEQETTVNPTQIPIPPSEPPQEKRKEEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTAALSKSLSEEISEDPMKPRTSLRSPSLSPYRDFAATSAIGKQSPEDQDSKDDLFSLDDDSFHGDGSSGPTFEGFIPAKNQETYSKKSKVLKLRQLIDDSPDSPADDEQSSDDSEDVAMKEDDDDASKSASPNTVSAEDSKSSASSVQDEPKDQDLGDTKMETGTGSPTAMMIDVQNIPKPPNTPPPLQNIDIPMKIEVPKKIDTPKKLELPKKPEPFKKTEPPKKLEPQKKAEAPKKVEPPKKQEVPKKPELTRKIEQPKKNENPKKVDPPKKVELTKKAETPKKIEIIPKKVELPKAFKVENVKKVEILKKSESPKKIELPEKETPKKIDLRNIDLSKTPETTPIPSTSILAAAKEKTPEEIKEEQLNLLSIPLPASDPIHVTPKKLDPVIFKTKMEPPSSPLIDGEEDKSEPDSPARIDVIPEPPPGFLLQSEGPKIAEKLLKAISSAKRLSMSPPPLDNRTSPVTSKTDILKPVASDTRLSPICPEPRTSVVKTDPVKPLLKITEAAKKEDSIFGEPTAIIDSKDSLDVKKKDGSSTPRLQSPLNILERRKSVAADLPLNVAGKNNKVLSDTIQKLSSQINQSATAASVANIPLPSSTAPFLSEDRSESSDSDDSSRRLIIDKLSMEEWGSGASSETSRPAPTNSGNTGLRLHLGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRVTAGTSQPAAPAPPQEEDSNLSILFCEETIPGSPAPDAEPTPPRQRPHMPFASASAHHLAKDERRGSAAPQANGHEGAAGGAGPAPAAGGRAGWGRGRLLVDNTPPTTPDSNRSSIEMSPQRDRRLSERDSPSERKDEEDENSRPADALVDMDKPAHSKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00699879;
90% Identity
-
80% Identity
-