Cten001990.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- nfxl1
- Assembly
- GCA_963573255.1
- Location
- OY754302.1:24472827-24475741[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.67 6.9e+03 -2.6 0.3 14 18 99 103 99 104 0.76 2 17 0.65 6.7e+03 -2.5 1.2 14 19 152 157 152 157 0.86 3 17 2.8e-07 0.0029 17.8 15.4 1 19 202 219 202 219 0.99 4 17 1.7 1.7e+04 -3.9 1.2 5 10 244 249 244 249 0.87 5 17 0.00014 1.5 9.1 15.8 1 19 255 274 255 274 0.97 6 17 2 2.1e+04 -5.1 2.3 9 13 280 284 279 284 0.72 7 17 0.71 7.3e+03 -2.7 0.9 6 10 299 303 298 303 0.89 8 17 6.4e-05 0.66 10.3 12.2 1 19 309 327 309 327 0.97 9 17 2.2e-06 0.022 14.9 11.4 1 19 364 381 364 381 0.97 10 17 2 2.1e+04 -5.4 14.9 3 19 417 432 415 432 0.88 11 17 1.3e-10 1.4e-06 28.4 10.4 1 18 441 458 441 459 0.97 12 17 1.7 1.8e+04 -3.9 1.4 5 10 487 492 487 492 0.88 13 17 0.0017 17 5.7 5.6 10 19 507 516 504 516 0.91 14 17 0.00058 5.9 7.2 6.1 1 12 525 535 525 535 0.96 15 17 1.2e-05 0.13 12.5 7.9 1 12 606 617 606 617 0.97 16 17 2 2.1e+04 -4.8 12.5 3 18 646 663 645 663 0.78 17 17 2.8e-05 0.29 11.4 10.4 1 16 715 729 715 735 0.86
Sequence Information
- Coding Sequence
- atgccaATTACCAAGGATAAAGGTTTTAAAGCACAAAAGAGCAACAAGAAGCAGCATGCAAATTTCGAACAGATTCAAAAGAAGAATATGGAATTATTAAAGGATAGAGTAATGCAAATCGATAGTTCTGATGACGAAGATTCGTCTAGAGttggaaaggaaaaaattgcaaatctcttcaaaaattatcagggaaatgaaaatgacgTGGCGAGAATACAGCAGTATTTTGATGGTGAGAATCTGGACTGTCTGATTTGTATTAGAAGTGTAAAAGCGAAAGATAGAATTTGGAATTGCGGTACTTGCTACCTATCGTTCCACTTACTCTGCATTCAAAAATGGGCCAATGACTCGATGAACTTGAAAAAACTTTGGCATGACAATCAACCGAGTGGTTACTATGACAATCAAGGAAATTATATCCgtaaaaaggaattgaaattattttgggatTGTCCAGCATGTCGTCATGAATACCTTGATAATGAGATTCCAAGAGAATATTCATGTTATTGTGGCAAGGAAATTGATCCAGAGTTTCAAGATTGGCTTGTTCCTCACAGTTGTGGCATGATGTGTCAGAAACCTCTTGAAACTTTATGCGGTCACAAGTGCACGATTCTTTGTCATCCTGGAAAATGTCCAAGCTGTCCACAAACAATTCAAACTAGCTGTAAATGCGGTAAATCCCCAATTAAAACTATTCGATGttcccaaaaattttggaattgctcacaaaaatgttcaaagcTCCTCACATGTGGCGTCCATAAATGCTCAGGAGTCTGTCATGGTCCTAATGAGTGTCCACCTTGTAAAGAgaaaagtgttaaaaaatgtcattgcGGAACTAAGTCAAAAGAGATTAAATGCGAACAATTATCATGGAgttgtgagaaaatttgtgGCAAGCTGCTAAGTTGTGGTATTCATGTCTGTGATAGGAAATGCCACGGTAAAGATTGCGGTGAATGCAAATTTGGTCTTGAAAGAAGCTGTTTTTGTGGGAAACAAAAAGTGACCGTATCAAAATGTGATGAATCTTCACTCGATTCTTGTGGTGATACATGCTTAAAGCAACTATCTTGTGGACATGTCTGTCTATCAAGATGTCATAAAGGAGATTGTGACACGTGTAAGGAACAAGTCGAGAAGAAGTGCAGGTGTGGGGCAATCTCTAAATTATTTCCTTGTTCCAAGGAGCTTTTGTGTGAGACAAAATGCAATAGTCAAAAATCGTGTAAGAAGCATTCCTGTAAATCTAAATGCTGTGTTGAATGTGCACCGTGTTCTATAGTTTGTGGAAAGGTACTGGCTTGTGGACGACACAAATGTGATGCACTTTGTCATTCGGGAAATTGTTATCCATGCAATGAGAGGCAAAAAGTGACATGTCGATGTGGAGCCACTTCAGTTTCTGTTCGATGTGGAAAAGCGAATAAATATAAGAATCCAAACTGTACAGAGACGtgtaaaattccatcaaaatgtCATCATGAGTCGAAGCCTCATTATTGTCATATTGGAGATTGTCctaattgcaaaaaaatatgcgaTGAGCCTTTGAAGTGTGGACATAAATGCTTAGATACCTGTCATGACTACGTGAGAACTGTCATTAAGGATAAGATCTTTATTCCAGCAGGTCCTTGGGACGTTCAGGAGGAAAAGATTGAGTACAAAAAACTACCACACTCATCGTGCAAGACAAAAGTTCCAGTAAATTGTTTAGGTGgacatgaaataattttaatgaactgtTATGAGGCAAGAGTCACGTCATGTGGGCGAAAATGCAATCGGAAGCTTCCGTGTGGCAATCATACATGTCAAAAAGATTGTCATGAAGTTACTGATCTTAATAGCGATTTACAAGATGAGAATTGTGATGAATGTGAACTGTCTTGTATGAAGGAACGGCCAAAATATTGCATGCATCCGTGCACTCGTTCATGTCATGTTCCTGAAAAGCCTTGCAAAAAGTGCATTGTTCAAATAAAGACAAAATGCTTTTGTGGTCTATCAGATGCATATTATCGATGCTGTGACGTAAATAAGCGAGATATTGATGAGGAGACTCGACAAGCTTTGTTGGAAAAGTATCTTTGTTGTGGCGCCAAatgtgtaaaaacttaTCCCTGCGGTCATCAATGCATGAATATTTGTCATCCAGGAATTTGTAAAGGTGCTGAGAATTGTAGgaagaaagtaaaattaatgtgTTCATGTAAAACTCGTAAAATTGACATGACATGTGATAAAGTACGAGctgaaaatattacaatcctTGAATGTAATGAAGAATGTGAGGAAAAGAGGAAGCAGATTGAGGAAGAAAaccaaagaaaattattaaaacagaGGCAACTagaagaggagaaaaataGGAAGGAATTAGaggaatatgaaaagaaatttggaCCTAAGAAATACAAAGAAAAGAAGCAACGATATGTTGAGGAAAAGAAGagcaatttgaaattaaaaatcgcTGTCTCATCTGCAATTTTCCTTGTCGTATCAattgtttcttattttatacttttcaaCAATTAA
- Protein Sequence
- MPITKDKGFKAQKSNKKQHANFEQIQKKNMELLKDRVMQIDSSDDEDSSRVGKEKIANLFKNYQGNENDVARIQQYFDGENLDCLICIRSVKAKDRIWNCGTCYLSFHLLCIQKWANDSMNLKKLWHDNQPSGYYDNQGNYIRKKELKLFWDCPACRHEYLDNEIPREYSCYCGKEIDPEFQDWLVPHSCGMMCQKPLETLCGHKCTILCHPGKCPSCPQTIQTSCKCGKSPIKTIRCSQKFWNCSQKCSKLLTCGVHKCSGVCHGPNECPPCKEKSVKKCHCGTKSKEIKCEQLSWSCEKICGKLLSCGIHVCDRKCHGKDCGECKFGLERSCFCGKQKVTVSKCDESSLDSCGDTCLKQLSCGHVCLSRCHKGDCDTCKEQVEKKCRCGAISKLFPCSKELLCETKCNSQKSCKKHSCKSKCCVECAPCSIVCGKVLACGRHKCDALCHSGNCYPCNERQKVTCRCGATSVSVRCGKANKYKNPNCTETCKIPSKCHHESKPHYCHIGDCPNCKKICDEPLKCGHKCLDTCHDYVRTVIKDKIFIPAGPWDVQEEKIEYKKLPHSSCKTKVPVNCLGGHEIILMNCYEARVTSCGRKCNRKLPCGNHTCQKDCHEVTDLNSDLQDENCDECELSCMKERPKYCMHPCTRSCHVPEKPCKKCIVQIKTKCFCGLSDAYYRCCDVNKRDIDEETRQALLEKYLCCGAKCVKTYPCGHQCMNICHPGICKGAENCRKKVKLMCSCKTRKIDMTCDKVRAENITILECNEECEEKRKQIEEENQRKLLKQRQLEEEKNRKELEEYEKKFGPKKYKEKKQRYVEEKKSNLKLKIAVSSAIFLVVSIVSYFILFNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -