Cten000656.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- stc
- Assembly
- GCA_963573255.1
- Location
- OY754302.1:7725044-7726652[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.82 8.5e+03 -2.9 1.1 15 18 277 280 276 281 0.81 2 7 0.51 5.2e+03 -2.2 0.4 4 10 310 316 310 316 0.82 3 7 0.0093 95 3.3 9.0 3 14 323 334 322 339 0.86 4 7 0.83 8.5e+03 -2.9 0.6 6 10 365 369 364 369 0.86 5 7 2.9e-09 3e-05 24.1 12.3 1 19 375 393 375 393 0.97 6 7 2 2.1e+04 -4.5 1.5 6 10 423 427 422 427 0.82 7 7 1.4e-09 1.4e-05 25.2 14.5 1 19 433 451 433 451 0.98
Sequence Information
- Coding Sequence
- ATGGCGCCTATTTCGATAAATGAAGATAAATCTGCAGCAACGACTTCAGCATTGAATGTAGAAGCAAAGGAATTTTATCCATTAAGTCCCAGTAATCACGAATCTGGCGAATCCAGTAATGCAGGAGGAAAGTCAAAAGGCACAGGTGCTgttccaaaaaagttttatgataAGAGGAACGACCAGTTTCGTCAGAAGAAATTTTATCCTGACAATCAGAGAAATTGGCGAAATAATGAGAATCAAGGCAGCTATGGAAGTAATAAGCATAAGAGCTATGGAAGAAGAAACGATTCTGTGAATCAAAATGGTGATCAGACGAgtgaaataaaagttaatgagGAAAAGCAAGAGAGAAAGTTTTATAGAAACAACCAGCACAGCTATGAACAGCGTAGAAATAGTAATAATGGTTATACAAGCAAGtttaaaatcacaattaaACCTGACAATACTACTAAAAAGTCTGAACAGTCtgaaaatgaaagtaaaacaGAGTCTAGTAGCAAATATGAGGAGTCTGAGAAGATCCAGTCTAAAAATAAGGAAGGAGAGAACAACCAGCAGAAACTTAAGCACTATCATGACTACAAAAATCATAGGAAACGTCCACAATCGAAAAAACCTGTGAATGCAATCTCAATTTCGCAACGTGAGCAATTGATAAAAGAAATAGAAAGGAACACATTAGAATGCATGATTTGCTGTGAGAAAATTAAGGCTTACAATCCAATTTGGAGCTGTTTAGTCTGTTACCATATCCTTCATCTAAATTGTATCAAAATGTGGATGAAAAAGTCAAAGGAATCGAATGAAGAAGGATTTAGATGTCCAGCATGTAATCAAATAGCTCAAAATAAGCCAGGTGAATATTTGTGTTTCTGTGGAAAGTTAAAGAATCCACCTGTTAATCGCAACGACTTGCCTCATTCATGCGGAAATATGTGCCTCAATACATCAAACTGTGAACATCCTTGCAATTTAGTTTGTCATCCAGGAGCTCACGAAAAGTGCTATGCTGTTGTCAGTAAATTTTGCGGATGTGGACGAACATCAAAGAATTATCAGTGTAGCATGAAAGCAGCTTTTGAATGTGATTCAGTCTGtgacaaaactttaaattgcGGTAATCATAAATGCACTAAAATCTGTCATCAAGGAGACTGTGAAGACTGCTCACAAGAACTTGATTGTAATTGCTATTGTGGAGctgaaaacaaaaagattaTTTGTACAGTCGAAAATACAGACAAAACTAAATATTCATGCGAAAAGGAATGTGGAAAGACTTTAAATTGTGGCAATCACAAATGTGTCGAAAAATGTCATTTAGGAGAATGTCCACCTTGTAAATTAATGCCTCAATTTGTAAAAACATGTCCATGTAGCAGAATGTCAATCAAAAGTGACGAACGCAAGTCCTGCTTAGATCCAGTTCCATTATGTCAATCAGAGTATGCCCACCGTGTGCTCAAACCAGCAACATCAAATGCCGTTGCGGTCGAAAAGAGGAGAAAGTTCCATgtaaagatttattaa
- Protein Sequence
- MAPISINEDKSAATTSALNVEAKEFYPLSPSNHESGESSNAGGKSKGTGAVPKKFYDKRNDQFRQKKFYPDNQRNWRNNENQGSYGSNKHKSYGRRNDSVNQNGDQTSEIKVNEEKQERKFYRNNQHSYEQRRNSNNGYTSKFKITIKPDNTTKKSEQSENESKTESSSKYEESEKIQSKNKEGENNQQKLKHYHDYKNHRKRPQSKKPVNAISISQREQLIKEIERNTLECMICCEKIKAYNPIWSCLVCYHILHLNCIKMWMKKSKESNEEGFRCPACNQIAQNKPGEYLCFCGKLKNPPVNRNDLPHSCGNMCLNTSNCEHPCNLVCHPGAHEKCYAVVSKFCGCGRTSKNYQCSMKAAFECDSVCDKTLNCGNHKCTKICHQGDCEDCSQELDCNCYCGAENKKIICTVENTDKTKYSCEKECGKTLNCGNHKCVEKCHLGECPPCKLMPQFVKTCPCSRMSIKSDERKSCLDPVPLCQSEYAHRVLKPATSNAVAVEKRRKFHVKIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -