Cten011145.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- grn
- Assembly
- GCA_963573255.1
- Location
- OY754304.1:6442754-6487764[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-19 5.7e-16 58.0 4.7 1 35 285 318 285 319 0.98 2 2 7e-18 2.1e-14 53.0 6.9 1 35 414 447 414 448 0.97
Sequence Information
- Coding Sequence
- ATGCCCTCATCACATGTTTCAACGCCACAAGTATGCAGACCACATTTTCATGCACCACTGCCGTGGTCGTTGAGTGATCCGCCAAAGCCTTTATCATCGAGCGGTGCGTGGGGATCACCATTTGCATGTCCGCAAGATCCACAGGATAGCAAATTAGTTGGACAAATTCAAAATAGTCAGAGTAGTAGTGGgcaacatttattttcatttccaccGACACCACCGAAGGACTCAACACCTGATTCAGTACAAACAGGACCGACGGACTATCAAGCCGCTGTAAATGTATTTATGCATCAAGCTCAAGCATCCACAAATAGCCAATTAAATGGAACTGATACTAGCTCAAGTTGTGGTCTCGACGTTAAACCATGCCTGTCGGGCAATTCGGTTAGCGGTAATGGTAGTAACAATGCACAACAATCACAACAAGCGCCAAAACAACGTGAAGGTACGCATCAATCGCAGAGTACTAGCAATAGTcaaaataatagcaataataatacaaaTAGCAATTCAAatagtcaaaatttaaataatcactCGTCcgtacataataataataatactagTAGTAGTAATAATACGACAACTGCACACCACCATcatcaacaacagcagcaatcCCAACAACAACACGGCAGCAGCCTTTTTGATTCATCACATCAAGCTGCTGCTGTTGCCGCTGCCGCTTCTTATGGTGCCTATGAAAATAGCTATCTCGGCTATCCACAATCGACCAACAGCGTATTTCAATCAAATATACGCTCATCGACGATGAATAACAATAGTCCATCATCGAACCATAAACCGCAACGCACAAAAGCGAGAACAAGTGCCGAAGGTAGAGAGTGTGTAAATTGTGGTGCAACATCGACACCACTTTGGAGAAGAGATGGAACTGGACATTATTTGTGCAATGCCTGTGGATTATACTATAAAATGAACGGACAGAACCGTCCACTTATCAAACCCAAACGAAGACTTAATCCAAGTCAACGTATCCCTACTTCATCAATTTCAAGCATTCTTAAAGCTCCAAACTCACAAGAGAATGCAAGAAACAATATTGAACACGCAATAACTCTTAAAGTTTTTCCTATTCCATATCAAGAATCTCAATCCGCAACGACATCAACTACGCTTCTTCTTCAACTGCCATTTTGTTGTCTGAACAAATCTGAGTACGATCTGAAACTACAGTCACTACAAAGTGCAGCACGTCGTGCTGGTACATCCTGTGCAAATTGTAAAACGACAACAACAACACTTTGGCGAAGGAATCAAGGTGGTGAACCTGTTTGCAATGCCTGTGGACTTTATTACAAATTACATAATGTAAATCGACCATtaacaatgaaaaaagaaggaattcaGACACGAAATCGTAAGCtgtcatcaaaatcaaaaaagaagaagggcGTTGGTGGATGTCTACCGATTGGCAGTCATTTAGGTGATTTAATGAAACCACTTGATTCAAAACCATTCCCCAGTGGATTCTCAACCTCAATGGGTCAACATGGACACTTATCGGGTGGACTACATCCTGCACATACACACATGCATGGCGGCTGGTCAGGCTGGCCTGGTGCACTTGGTGCATCAAGTAGTTTACAAAGTGGATTTGCTACAGCCGGTTCATTAGGCGGCGGTGTAGTGCCTCATTCGCAATCGTATCATCTAGGGCTCAATTCAATGGGTGCATGGAGATCAGAATACACATGA
- Protein Sequence
- MPSSHVSTPQVCRPHFHAPLPWSLSDPPKPLSSSGAWGSPFACPQDPQDSKLVGQIQNSQSSSGQHLFSFPPTPPKDSTPDSVQTGPTDYQAAVNVFMHQAQASTNSQLNGTDTSSSCGLDVKPCLSGNSVSGNGSNNAQQSQQAPKQREGTHQSQSTSNSQNNSNNNTNSNSNSQNLNNHSSVHNNNNTSSSNNTTTAHHHHQQQQQSQQQHGSSLFDSSHQAAAVAAAASYGAYENSYLGYPQSTNSVFQSNIRSSTMNNNSPSSNHKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLNPSQRIPTSSISSILKAPNSQENARNNIEHAITLKVFPIPYQESQSATTSTTLLLQLPFCCLNKSEYDLKLQSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGVGGCLPIGSHLGDLMKPLDSKPFPSGFSTSMGQHGHLSGGLHPAHTHMHGGWSGWPGALGASSSLQSGFATAGSLGGGVVPHSQSYHLGLNSMGAWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -