Basic Information

Insect: Chironomus tentans
Gene Symbol: ken
Assembly: GCA_963573255.1
Location: OY754303.1:13517681-13520144[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.8 1.5e+02 3.4 2.4 1 23 163 186 163 186 0.94

2 10 3.6e-07 1.9e-05 25.0 1.7 1 23 196 219 196 219 0.98

3 10 0.028 1.5 9.6 2.9 3 23 231 252 231 252 0.98

4 10 0.00039 0.021 15.5 3.7 1 23 257 280 257 280 0.95

5 10 0.00057 0.03 15.0 0.9 1 23 301 323 301 323 0.97

6 10 0.00021 0.011 16.3 0.9 1 23 332 355 332 355 0.98

7 10 0.084 4.5 8.1 0.8 1 23 361 385 361 385 0.95

8 10 0.0017 0.09 13.5 2.2 1 23 391 413 391 413 0.98

9 10 0.0013 0.069 13.8 2.7 1 20 419 440 419 443 0.94

10 10 0.0027 0.14 12.9 0.1 1 20 449 468 449 470 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.8	1.5e+02	3.4	2.4	1	23	163	186	163	186	0.94
2	10	3.6e-07	1.9e-05	25.0	1.7	1	23	196	219	196	219	0.98
3	10	0.028	1.5	9.6	2.9	3	23	231	252	231	252	0.98
4	10	0.00039	0.021	15.5	3.7	1	23	257	280	257	280	0.95
5	10	0.00057	0.03	15.0	0.9	1	23	301	323	301	323	0.97
6	10	0.00021	0.011	16.3	0.9	1	23	332	355	332	355	0.98
7	10	0.084	4.5	8.1	0.8	1	23	361	385	361	385	0.95
8	10	0.0017	0.09	13.5	2.2	1	23	391	413	391	413	0.98
9	10	0.0013	0.069	13.8	2.7	1	20	419	440	419	443	0.94
10	10	0.0027	0.14	12.9	0.1	1	20	449	468	449	470	0.95

Sequence Information

Coding Sequence: ATGAGCAATGTTAAACGACTGTGTCGTGTGTGCATGGTAAATGACTGGAATGGCAatttgattccaatttttcaggATGCTGCTGGGAATAGGACTGCTTCAGACATCTTTACTATATCTGGAGTTCAAGTTGTTGACTTCCCATCATGTCCTGCCTTAATATGTCTAAAATGCATTGAGGATCTCTCAAGggcaattatttttagaaatcgCTGCAAAAGTTCCGATCAGTTCCTTAGAGACACAATATTTAATGACAGAAATCATCAATCAAGCCAGGTCCAACCTTATGACAATTTTGAGCTCAAGAATGAACAAGATGTActtaattccatcaaaatagaaccaatagaaattgaaacattttttgaatatccAACAATCAATGCTGAAGCAAtccttaatgaaaattctttagatGATGACCGAGAAGATGTTAATTTGATTGACTTGAAGGAGGAACTGACTGGTgccaataaaaagaaattcaagtGTATCCATTGTGAGCAATTGTTGTCATCTGAACATTCTTTAAAGTATCATTTAAATGCCATTCATGGGACACAACATAAACCGGAGAAGCAATTCACTTGTGAGATCTGCGGCAAAGCATTCGTCTTCAAATCAAAGTATACTCGACATTATAGGACTGTTCATATAGAATTAAAGGAATCAAATGATAATATTGGATGTCATTATTGTATGAAGCTATTCGACCAGAGGACAGCACTTAAGGATCATATTAGATATAAACATGAAGTTTACGATTTTAAATGTGATAATTGCGGGAAATTCTTCACATTAAAGAACAAGTTATCAAAGCATTTCAAAGAATCTCACCTAAAAGGATCAAGACCAAGAAAGCAACGAGTTAAGAAAGAAGCAAAAGAAGTTCAATGCTTTCCATGTGTCGTTTGTGGGAAAATTTGTGCCAGCAAGACGTTCCTTAAAGTCCATGAAAAAAGTCATATCAAAATTAGACCTGAGGATTATTTTTACTGTGACTTGTGTGGAAATAAGTTTAGATCGAGAAATCCACTTGAACTTCACATAAAGACACGGCATATCCTTAAATTACGGTACACATGCGATAGATGTCCTGGAAAATCGTGGGCAAGAAAGGATCACATGAAAAGACATGTTAAAGTTGTGCATGAGAATATACGAGAGTTTAAATGCGAATGGTGCGGAAAGGACTTTCCAGAGAAGAGGAAACTTGAATGCCATAGAAGGATACACACAGGGGAACAGCCATACACTTGCAACTATTTCGGATGTGGAAAGAAGTACACTCATGAGACTGATTATCGTCGGCATATTTGGTCACATACTGGAGAACGGAAGTACAACTGCACATCATGTAGGATTGCTTTCAGCAAGCGTAGTGAACTAATAGCTCACAGAAGTGAATGCGTCTACTACAATTACAATCAAAACAATGTGAATATATAA
Protein Sequence: MSNVKRLCRVCMVNDWNGNLIPIFQDAAGNRTASDIFTISGVQVVDFPSCPALICLKCIEDLSRAIIFRNRCKSSDQFLRDTIFNDRNHQSSQVQPYDNFELKNEQDVLNSIKIEPIEIETFFEYPTINAEAILNENSLDDDREDVNLIDLKEELTGANKKKFKCIHCEQLLSSEHSLKYHLNAIHGTQHKPEKQFTCEICGKAFVFKSKYTRHYRTVHIELKESNDNIGCHYCMKLFDQRTALKDHIRYKHEVYDFKCDNCGKFFTLKNKLSKHFKESHLKGSRPRKQRVKKEAKEVQCFPCVVCGKICASKTFLKVHEKSHIKIRPEDYFYCDLCGNKFRSRNPLELHIKTRHILKLRYTCDRCPGKSWARKDHMKRHVKVVHENIREFKCEWCGKDFPEKRKLECHRRIHTGEQPYTCNYFGCGKKYTHETDYRRHIWSHTGERKYNCTSCRIAFSKRSELIAHRSECVYYNYNQNNVNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00319977;
90% Identity: iTF_00319977;
80% Identity: -