Cten016313.2
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- Zfy2
- Assembly
- GCA_963573255.1
- Location
- OY754305.1:9976307-9978181[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00087 0.046 14.4 1.3 2 23 93 115 93 115 0.96 2 13 0.3 16 6.4 3.3 2 23 153 174 152 174 0.95 3 13 0.00037 0.019 15.6 0.6 2 23 181 202 180 202 0.98 4 13 0.00011 0.0061 17.2 0.5 1 23 206 229 206 229 0.95 5 13 5.2e-07 2.7e-05 24.5 4.5 3 23 237 257 235 257 0.98 6 13 0.12 6.5 7.6 6.2 1 23 265 287 265 287 0.97 7 13 4.1 2.2e+02 2.8 2.8 2 23 302 324 301 324 0.91 8 13 2e-05 0.001 19.6 0.6 1 21 329 349 329 350 0.95 9 13 0.014 0.74 10.6 0.2 7 23 453 469 447 469 0.86 10 13 6.9e-05 0.0036 17.9 3.1 1 23 501 523 501 523 0.97 11 13 0.076 4 8.3 1.0 1 23 527 550 527 550 0.94 12 13 1e-07 5.5e-06 26.7 1.7 1 23 556 578 556 578 0.98 13 13 7.6e-05 0.004 17.7 5.9 1 23 586 608 586 608 0.98
Sequence Information
- Coding Sequence
- ATGACAATATCTGAAAGAATTCGTAAATTACGACAAGTTTTTAGTGAAGTTAAAGCcgaaaaagaagatgaaaatgtaatttgtgAAGCAAAACTTATACCTGAGTCAAATACAATCCACAAGAAAgtttcaaattacaaaattacaaaaaatccaAACGTTTGCAAAAAAGCTATAAGACTAACTCAAgttaaatgtcaattttgcttccaaaaattctgtcaTGATTACATTTTGGAACACACGAACAGATTTCATCCAGAAGAACTGAAAAACAgttgtaaaatttgtgacaaaaggttcttaaatttaaataatttgatgatGCACATgataaaaaagcataaaagtgATCATTTTTCTAAACCAGAGAAGTTTGAGTGTGactttgatggaaaattatttaatacaaGACATAAACTTTTCTGTCACATGAAGAATCACGAATTAAAAGTAAAGTGTCATATTTGTCAAGTTAAACTCCAGCGAAGGTATCTGAATCATCACATAAGGGATGTCcataaaaaggaacaaaaaaatcaatgtaaaatttgtaaaaaaattctcaataattcaGGAGCTTTGTTCCTTCATATTAAAAGACATGACAACGAGTTTGAGTGTCAAATATGCTCAAAGACATTTCCAACTGAAGGATATTTAGCCAGTCATAAGAAGGaatatcatgaaaattataaaagctTTGGATGTGAAACGTGTGGCAAGAAATTCAACCGAAAATCTCATTtgcaaaaacatcaaaataccCACGACAAAAATCGACCAAAGCGTTTCAAGTGCCATCGATGTGACTTTTCAACTGACTATAGTAAAAGCTACAAAATACATCTGAAATTCCACGAGACTCAAGACAAAAAATTCGCAGcaatgaaaaatccaaaaaaatgtgaaaagtgTTCAATATTATGCAGGAATGATAAGGCATTGTATCAGCACATGTTTTTTGTTCATCCAAAAGTTCCATTCCAATGTGATTTATGCGGAAAAGATTTCAAAACGAAATTTCAAGTCACTAGACACATTCTGTCAAGAACTTGTCAACCAAAAATCAATCTGAGTGCTgaaaatggattaaaaatacaaaatgttCAGGAAAATGCTGTCATGTTTTACCAAGATTCAGGATCTGTATCAGTAAAGCAAGAACAATTGAGCGACGACGAGGAATCCCcagaaacctcaaaaaatcctgaaaatgggctaaaaattcaaaatgttcaagaaAATGCTGCCATATTTTACCAAGAAGGTaccaatttaattaaaactgaaGAAAAGTGTTCAACAGAGAAACCAGAAAATATTACAGATCCAATGTTCAAATGTGATCTCGATGGCAAGCTATTCCCATCAAAATATAGTCTTTCTCGTCATATGAAAGTTCATGTACCACTAATTGAATGTAAAATCTGCAATTTACAACTAAAGCCATTAAGCATGTCCCTGCATTTAAAGAATCTCCATGCTGATGGCAAAAACTTCAAATGCGATCTTTGTTCAAAGACTTTTACATCAAAAAGTCGACTTCAAGAGCACAACACGACCCACTACAAAAAGTTcgaatgtaaattttgtggaataaaGATGAGAAAAGTGACAGACTTGAAAAGACATGAGAATGAGTATCACATCAATCCAGCCAGCTATGAGTGTAAGATTTGTGACAAGAAGTTTAACAGAAAAGCAAATCTTAAAcagcatttaaatttacataacaaaAATCACGAAAAACGATTCAAATGCGATCATTGTGATTACAGCACTGATAGGAAATCTGATTTtaataaacatcaaaaatatcatcagcgtcagaatgaaaaatccaaagaatctgaaaatacaataaaatcttaa
- Protein Sequence
- MTISERIRKLRQVFSEVKAEKEDENVICEAKLIPESNTIHKKVSNYKITKNPNVCKKAIRLTQVKCQFCFQKFCHDYILEHTNRFHPEELKNSCKICDKRFLNLNNLMMHMIKKHKSDHFSKPEKFECDFDGKLFNTRHKLFCHMKNHELKVKCHICQVKLQRRYLNHHIRDVHKKEQKNQCKICKKILNNSGALFLHIKRHDNEFECQICSKTFPTEGYLASHKKEYHENYKSFGCETCGKKFNRKSHLQKHQNTHDKNRPKRFKCHRCDFSTDYSKSYKIHLKFHETQDKKFAAMKNPKKCEKCSILCRNDKALYQHMFFVHPKVPFQCDLCGKDFKTKFQVTRHILSRTCQPKINLSAENGLKIQNVQENAVMFYQDSGSVSVKQEQLSDDEESPETSKNPENGLKIQNVQENAAIFYQEGTNLIKTEEKCSTEKPENITDPMFKCDLDGKLFPSKYSLSRHMKVHVPLIECKICNLQLKPLSMSLHLKNLHADGKNFKCDLCSKTFTSKSRLQEHNTTHYKKFECKFCGIKMRKVTDLKRHENEYHINPASYECKICDKKFNRKANLKQHLNLHNKNHEKRFKCDHCDYSTDRKSDFNKHQKYHQRQNEKSKESENTIKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -