Cten010681.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- su(Hw)
- Assembly
- GCA_963573255.1
- Location
- OY754304.1:1095640-1097750[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0038 11 6.3 0.5 14 40 136 159 130 164 0.75 2 9 0.00021 0.6 10.4 0.3 18 40 174 193 167 196 0.89 3 9 0.028 81 3.5 0.1 17 29 205 217 194 227 0.73 4 9 0.011 34 4.8 1.1 14 34 260 277 252 291 0.74 5 9 0.061 1.8e+02 2.4 3.3 18 39 292 310 280 313 0.81 6 9 5.4e-05 0.16 12.2 2.2 13 41 315 340 308 343 0.81 7 9 0.0059 17 5.7 1.6 13 39 344 367 339 377 0.72 8 9 0.57 1.7e+03 -0.7 1.9 15 28 374 387 365 396 0.79 9 9 1.2e-06 0.0034 17.6 2.8 14 44 401 428 390 428 0.86
Sequence Information
- Coding Sequence
- atggGTCGCCCAAAAGGTAGCGTAAATAAAGAACATTCAAAGACTAAGAAGCCTGACTTGCCGAAGGAAGATGTCACATCTGTAGCTGTTCCAGTCATGGAAGCAcctttaatgatttttgtatGTAGACGTTGCTCTGGAAATTTTGATAGTACAGAATCTTATCAACAACATCCATGTCCAGCTCAAGTATTTGCTATTGTTGAGGAGAAAACAGCTGAGCCTGTAGAAAAACctaaaaaatctccaaaaaagtCGCCTAAAAagtcgaaaaatttaaaagaggaACAACAAGAGTCAAAAGTTCTCTCAGAAATAATATTAGATCCAGAAactaatgaagaaatttttaagaaaccACGTAAGCCATACAAAAAGAGGGAAAAATCGACTGCAGAAGAGCCAAAAACTCCAATTGCATGTCCAACTTGTGGAAAAGTTTTTACCCGAAAGTATCACTTAGAGAGACATCTAACTCATACGCAATGTAATCCGGGCACATTTAAGAAAGAGGAATTCAACTGTGAAGTATGCAACAAAGTGTTTTCTCGTATCGATAACCTTCGAATGCATTTAAGAGCTCATTTAGGCGAAAAATCTAGATCTAGAGATTTTCAATGTCCATACTGTGAAAAAGCATTTTATGGATCGTCATTGCTCAATATCCATATTCGTTCACATACCAAAGAAAAGCCTTATATTTGTTCATGGGAGGAATGTGGTAAAGGATTTCCATCATCTGGAGCACTGACTAAGCATCGACGAACTCACACAGGTGAGAAGCCATACACTTGCAGCATCTGTGGAAATAAGTTTGCAGCTAAGGAAACATTAAATCGACACACAAAAACTCATACGGGTAAAAGAGATCACGTATGTCGCATCTGTGGAAAGAGTTTCATCCAAAACACACAACTTCGTGCTCATTTGTTCCATCATACTGGTGAAAATGCTTATAATTGTGACATTTGTGGAAAACAATTTAATCGGAAGACAAGAATGCGAGAACATATCGAGTATATCCATCTTGAGAAGAAGATGCCGACGTGTAATATGTGCTCGAAAACGTTCATGAGACGAGAGGATTTGGGGCGTCATATTGAGTCACACATTGGGGAACGGAAGCACATGTGTTCAATTTGTAATAGGAAATTCGTAACCAAAGCTGCTGCCAGAATTCACATGCGAATTCATCAAGTTGAAGATCCAGCACGATGTAACTATTGTAATAAAGATTTTCTTCGTATGGACTGTCTCGTTCGTCATGTACGCTCAAAGCACCGTGATATGCTGCAACAAATTATTGTCGAAGCTGAGACAAATCGAATCATATCAGCTCAACAGAATAAAATCGCCGATACTGAGGAACTTGAAATTATTGTATTTAATGATGATTCTCAGGAAACTGTCTATGAAGTTATGGACGTTGAGGAAGCAGTTGATGAGAAACCTATAGGTAGAAAAACTAAGAAATCGCAAGCTAAAAAGGAAGTTGCTCTAattattaatgatgatgatgacgacgaaTGTGCCCCAATATTTTTGGACGACGACCTCCTCAAGAAAAGAATTCAAGAACTTCTTCAGATTGTCATTGAAGAAAGTCTATTAAAAGAACTTGGATTTGGCAAGAAGCCAATCGATGAGGTCCTTTGCTCAGTTCTCGAACAGTGCAGTCACACGCCATTAAGGAAGGGCGATGgtgttgatgatgattcaaCAAGGATGCGTGAAAATACAAAGCAATTATTCTCTATGGTGCTGGATGAAGAGCACATTAAATCACTTTTGAATAACTACACAGTTGATGAAGTCATCACCATTGTCCTTAAAATGGCTAAATAG
- Protein Sequence
- MGRPKGSVNKEHSKTKKPDLPKEDVTSVAVPVMEAPLMIFVCRRCSGNFDSTESYQQHPCPAQVFAIVEEKTAEPVEKPKKSPKKSPKKSKNLKEEQQESKVLSEIILDPETNEEIFKKPRKPYKKREKSTAEEPKTPIACPTCGKVFTRKYHLERHLTHTQCNPGTFKKEEFNCEVCNKVFSRIDNLRMHLRAHLGEKSRSRDFQCPYCEKAFYGSSLLNIHIRSHTKEKPYICSWEECGKGFPSSGALTKHRRTHTGEKPYTCSICGNKFAAKETLNRHTKTHTGKRDHVCRICGKSFIQNTQLRAHLFHHTGENAYNCDICGKQFNRKTRMREHIEYIHLEKKMPTCNMCSKTFMRREDLGRHIESHIGERKHMCSICNRKFVTKAAARIHMRIHQVEDPARCNYCNKDFLRMDCLVRHVRSKHRDMLQQIIVEAETNRIISAQQNKIADTEELEIIVFNDDSQETVYEVMDVEEAVDEKPIGRKTKKSQAKKEVALIINDDDDDECAPIFLDDDLLKKRIQELLQIVIEESLLKELGFGKKPIDEVLCSVLEQCSHTPLRKGDGVDDDSTRMRENTKQLFSMVLDEEHIKSLLNNYTVDEVITIVLKMAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320897;
- 90% Identity
- iTF_00320897;
- 80% Identity
- iTF_00320897;